FFCP PHASE1:Hg19::chr4:143395415..143395436,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8821 | |EntrezGene=8821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6075 | |HGNC=6075 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BS68 | |UniProt=Q9BS68 | ||
|association_with_transcript=124bp_to_ENST00000507861,uc003iiz.2_5end | |association_with_transcript=124bp_to_ENST00000507861,uc003iiz.2_5end | ||
|cluster_id=chr4:143395415..143395436,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_26_at_INPP4B_5end | |description=CAGE_peak_26_at_INPP4B_5end | ||
|id=chr4:143395415..143395436,- | |id=chr4:143395415..143395436,- | ||
|ontology_enrichment_celltype=CL:0002537!5.76e-10!5;CL:0002076!1.00e-09!43;CL:0000223!5.45e-08!59;CL:0002231!9.34e-08!3;CL:0002541!2.27e-07!3 | |ontology_enrichment_celltype=CL:0002537!5.76e-10!5;CL:0002076!1.00e-09!43;CL:0000223!5.45e-08!59;CL:0002231!9.34e-08!3;CL:0002541!2.27e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1001319;4.59e-23;1!CL:1000600;4.59e-23;1!CL:0002537;8.66e-19;5!CL:0000322;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.10e-23,1;CL:1000600,4.10e-23,1;CL:0002537,8.66e-19,5;CL:0000322,1.51e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.14e-14!106;DOID:299!1.14e-11!25;DOID:4929!6.11e-11!2;DOID:0050687!1.62e-09!143;DOID:7!3.70e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.79e-23;4!DOID:1612;6.79e-23;4!DOID:299;1.50e-14;25!DOID:4929;1.65e-12;2!DOID:3910;3.06e-12;2!DOID:1324;8.21e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.42e-23,4;DOID:1612,6.42e-23,4;DOID:299,1.53e-14,25;DOID:4929,1.65e-12,2;DOID:3910,3.62e-12,2;DOID:305,4.95e-10,106;DOID:0050687,2.22e-07,143;DOID:1324,8.83e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0002394!2.59e-12!4;UBERON:0003928!2.59e-12!4;UBERON:0005631!2.98e-12!14;UBERON:0000158!2.98e-12!14;UBERON:0000974!4.80e-12!10;UBERON:0002294!6.79e-12!7;UBERON:0001173!6.79e-12!7;UBERON:0004912!6.79e-12!7;UBERON:0004119!3.00e-11!169;UBERON:0000925!3.00e-11!169;UBERON:0006595!3.00e-11!169;UBERON:0006562!8.64e-11!11;UBERON:0000341!1.35e-10!2;UBERON:0000077!1.35e-10!130;UBERON:0001007!2.32e-10!155;UBERON:0001555!2.32e-10!155;UBERON:0007026!2.32e-10!155;UBERON:0000344!3.42e-10!12;UBERON:0000161!6.47e-10!35;UBERON:0004921!1.86e-09!129;UBERON:0004185!1.86e-09!129;UBERON:0004923!2.23e-08!57;UBERON:0001042!9.15e-08!10;UBERON:0009145!9.15e-08!10;UBERON:0005911!1.38e-07!82;UBERON:0001723!1.81e-07!3;UBERON:0001033!1.81e-07!3;UBERON:0010056!1.81e-07!3;UBERON:0000476!2.27e-07!3;UBERON:0000920!2.27e-07!3;UBERON:0000305!3.13e-07!7;UBERON:0000478!6.80e-07!24;UBERON:0001041!7.16e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.34e-23;1!UBERON:0003703;1.34e-23;1!UBERON:0001174;1.34e-23;1!UBERON:0004914;1.34e-23;1!UBERON:0004645;4.59e-23;1!UBERON:0001256;4.59e-23;1!UBERON:0001259;4.59e-23;1!UBERON:0000305;1.02e-13;7!UBERON:0001255;3.06e-12;2!UBERON:0004903;3.06e-12;2!UBERON:0001556;3.06e-12;2!UBERON:0002173;3.06e-12;2!UBERON:0002186;3.06e-12;2!UBERON:0005631;6.78e-10;10!UBERON:0000158;6.78e-10;10!UBERON:0000058;8.27e-10;10!UBERON:0000310;9.03e-10;10!UBERON:0001443;5.75e-09;11!UBERON:0002114;8.96e-09;2!UBERON:0004821;1.35e-08;3!UBERON:0007499;1.35e-08;3!UBERON:0003215;1.35e-08;3!UBERON:0010368;1.35e-08;3!UBERON:0009911;1.35e-08;3!UBERON:0002299;1.35e-08;3!UBERON:0006524;1.35e-08;3!UBERON:0008874;1.35e-08;3!UBERON:0002169;1.35e-08;3!UBERON:0004894;1.35e-08;3!UBERON:0002394;6.87e-07;4!UBERON:0003928;6.87e-07;4!UBERON:0003343;9.36e-07;4!UBERON:0004785;9.36e-07;4!UBERON:0009856;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.34e-23,1;UBERON:0003703,1.34e-23,1;UBERON:0001174,1.34e-23,1;UBERON:0004914,1.34e-23,1;UBERON:0004645,4.10e-23,1;UBERON:0001256,4.10e-23,1;UBERON:0001259,4.10e-23,1;UBERON:0000305,1.02e-13,7;UBERON:0001255,2.90e-12,2;UBERON:0001556,2.90e-12,2;UBERON:0004903,3.62e-12,2;UBERON:0002173,3.62e-12,2;UBERON:0002186,3.62e-12,2;UBERON:0004871,3.95e-12,8;UBERON:0000310,8.84e-10,10;UBERON:0001443,5.64e-09,11;UBERON:0002114,8.96e-09,2;UBERON:0004821,1.51e-08,3;UBERON:0003215,1.51e-08,3;UBERON:0010368,1.51e-08,3;UBERON:0009911,1.51e-08,3;UBERON:0002299,1.51e-08,3;UBERON:0006524,1.51e-08,3;UBERON:0008874,1.51e-08,3;UBERON:0002169,1.51e-08,3;UBERON:0004894,1.51e-08,3;UBERON:0005631,2.52e-07,14;UBERON:0000158,2.52e-07,14;UBERON:0000915,3.94e-07,52;UBERON:0003343,8.61e-07,4;UBERON:0004785,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.40107902686839,0.296964680832639,2.15012491469462,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.629078458031288,0.537063524026827,0,0,0,0,0,0,0,1.04171104434093,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0.240476460754601,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0,0,0.346576998451015,0,0,0,0,0,0,0,0,4.13997041407727,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.134704106029175,0.358611026963382,0,1.13964576055364,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.40107902686839,0.296964680832639,2.15012491469462,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.629078458031288,0.537063524026827,0,0,0,0,0,0,0,1.04171104434093,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0.240476460754601,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0,0,0.346576998451015,0,0,0,0,0,0,0,0,4.13997041407727,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.134704106029175,0.358611026963382,0,1.13964576055364,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p26@INPP4B | |short_description=p26@INPP4B | ||
}} | }} |
Latest revision as of 21:02, 15 September 2015
Short description: | p26@INPP4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_INPP4B_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 124bp_to_ENST00000507861, uc003iiz.2_5end |
EntrezGene: | INPP4B |
HGNC: | 6075 |
UniProt: | Q9BS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.10e-23 | 1 |
lower urinary tract cell | 4.10e-23 | 1 |
amnion mesenchymal stem cell | 8.66e-19 | 5 |
pneumocyte | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.34e-23 | 1 |
extrahepatic bile duct | 1.34e-23 | 1 |
common bile duct | 1.34e-23 | 1 |
duodenal papilla | 1.34e-23 | 1 |
urinary bladder urothelium | 4.10e-23 | 1 |
wall of urinary bladder | 4.10e-23 | 1 |
mucosa of urinary bladder | 4.10e-23 | 1 |
amnion | 1.02e-13 | 7 |
urinary bladder | 2.90e-12 | 2 |
lower urinary tract | 2.90e-12 | 2 |
bronchoalveolar duct junction | 3.62e-12 | 2 |
alveolar duct | 3.62e-12 | 2 |
bronchiole | 3.62e-12 | 2 |
somatic layer of lateral plate mesoderm | 3.95e-12 | 8 |
breast | 8.84e-10 | 10 |
chest | 5.64e-09 | 11 |
duodenum | 8.96e-09 | 2 |
pulmonary alveolus epithelium | 1.51e-08 | 3 |
alveolus | 1.51e-08 | 3 |
pulmonary lobule | 1.51e-08 | 3 |
lobule | 1.51e-08 | 3 |
alveolus of lung | 1.51e-08 | 3 |
alveolar system | 1.51e-08 | 3 |
pulmonary acinus | 1.51e-08 | 3 |
alveolar sac | 1.51e-08 | 3 |
alveolar wall | 1.51e-08 | 3 |
extraembryonic membrane | 2.52e-07 | 14 |
membranous layer | 2.52e-07 | 14 |
thoracic segment of trunk | 3.94e-07 | 52 |
mucosa of oral region | 8.61e-07 | 4 |
respiratory system mucosa | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.42e-23 | 4 |
breast cancer | 6.42e-23 | 4 |
adenocarcinoma | 1.53e-14 | 25 |
tubular adenocarcinoma | 1.65e-12 | 2 |
lung adenocarcinoma | 3.62e-12 | 2 |
carcinoma | 4.95e-10 | 106 |
cell type cancer | 2.22e-07 | 143 |
lung cancer | 8.83e-07 | 15 |