FFCP PHASE1:Hg19::chr12:52301280..52301299,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52301280..52301299,+
|short_description=p2@ACVRL1
|description=CAGE_peak_2_at_ACVRL1_5end
|association_with_transcript=78bp_to_ENST00000267008,ENST0000038...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94 | |EntrezGene=94 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=175 | |HGNC=175 | ||
|TSSclassifier=strong | |||
|UniProt=P37023 | |UniProt=P37023 | ||
|association_with_transcript=78bp_to_ENST00000267008,ENST00000388922,NM_000020,uc001rzj.2_5end | |||
|cluster_id=chr12:52301280..52301299,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_2_at_ACVRL1_5end | |||
|id=chr12:52301280..52301299,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.85e-20!35;CL:0002139!4.37e-20!24;CL:0000222!5.33e-17!119;CL:0000071!1.95e-15!18;CL:0002546!1.95e-15!18;CL:0002078!2.80e-15!44;CL:0000055!1.39e-13!180;CL:0000057!1.52e-12!75;CL:0000183!8.40e-11!59;CL:0000680!2.14e-10!57;CL:0000056!2.14e-10!57;CL:0000355!2.14e-10!57;CL:0000187!6.42e-10!54;CL:0000213!6.21e-09!57;CL:0000215!6.21e-09!57;CL:1000413!2.35e-08!9;CL:0000136!7.39e-08!15;CL:0000192!1.53e-07!42;CL:0000514!1.53e-07!42;CL:0000393!1.67e-07!60;CL:0000211!1.67e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.29e-23;24!CL:0000115;4.72e-20;36!CL:0000071;4.44e-18;18!CL:0002078;5.94e-12;45!CL:1000413;1.20e-09;9!CL:0000213;7.19e-08;58!CL:0000215;7.19e-08;58!CL:0002543;3.40e-07;6!CL:0002138;4.38e-07;6!CL:0002544;5.64e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.34e-23,24;CL:0000115,2.04e-23,36;CL:0000071,4.61e-18,18;CL:0002546,4.61e-18,18;CL:0002078,7.21e-18,45;CL:0000222,3.14e-15,121;CL:0000213,1.41e-11,58;CL:0000215,1.41e-11,58;CL:1000413,1.21e-09,9;CL:0000057,1.92e-09,76;CL:0000136,1.98e-07,15;CL:0002543,3.56e-07,6;CL:0005020,4.37e-07,6;CL:0002138,4.37e-07,6;CL:0005022,4.37e-07,6;CL:0002544,5.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;4.44e-18;18!CL:0005022;4.38e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.55e-27!84;UBERON:0004111!1.10e-26!241;UBERON:0000055!2.09e-26!69;UBERON:0000477!2.99e-26!286;UBERON:0002049!7.36e-26!79;UBERON:0007798!7.36e-26!79;UBERON:0001009!1.59e-23!113;UBERON:0007023!3.22e-23!115;UBERON:0001981!3.87e-22!60;UBERON:0007500!3.87e-22!60;UBERON:0004537!3.87e-22!60;UBERON:0006965!3.87e-22!60;UBERON:0004535!4.74e-22!110;UBERON:0000025!5.05e-22!194;UBERON:0000119!2.66e-20!312;UBERON:0000483!9.65e-20!309;UBERON:0003914!3.36e-19!118;UBERON:0000475!1.29e-16!365;UBERON:0001986!1.95e-15!18;UBERON:0004638!1.95e-15!18;UBERON:0004852!1.95e-15!18;UBERON:0000468!4.27e-15!659;UBERON:0000467!4.06e-14!625;UBERON:0000480!6.10e-14!626;UBERON:0000490!1.36e-13!138;UBERON:0000487!6.45e-13!22;UBERON:0001637!9.02e-13!42;UBERON:0003509!9.02e-13!42;UBERON:0004572!9.02e-13!42;UBERON:0002385!1.10e-12!63;UBERON:0001015!1.10e-12!63;UBERON:0000383!1.10e-12!63;UBERON:0006914!2.19e-12!25;UBERON:0004290!3.65e-12!70;UBERON:0001134!4.62e-12!61;UBERON:0002036!4.62e-12!61;UBERON:0003082!4.62e-12!61;UBERON:0000914!1.56e-11!83;UBERON:0002329!1.56e-11!83;UBERON:0003077!1.56e-11!83;UBERON:0003059!1.56e-11!83;UBERON:0007282!1.56e-11!83;UBERON:0009618!1.56e-11!83;UBERON:0007285!1.56e-11!83;UBERON:0000481!3.03e-11!347;UBERON:0004573!3.44e-11!33;UBERON:0004571!3.44e-11!33;UBERON:0007100!3.14e-10!27;UBERON:0005256!5.11e-10!143;UBERON:0000486!3.53e-09!82;UBERON:0002100!3.58e-09!216;UBERON:0000948!9.93e-09!24;UBERON:0005498!9.93e-09!24;UBERON:0004140!9.93e-09!24;UBERON:0009881!9.93e-09!24;UBERON:0004141!9.93e-09!24;UBERON:0003084!9.93e-09!24;UBERON:0007005!9.93e-09!24;UBERON:0004139!9.93e-09!24;UBERON:0004291!9.93e-09!24;UBERON:0003915!2.35e-08!9;UBERON:0004700!2.35e-08!9;UBERON:0001917!2.35e-08!9;UBERON:0003103!4.11e-08!69;UBERON:0000479!6.93e-08!787;UBERON:0000947!7.20e-08!21;UBERON:0010191!7.20e-08!21;UBERON:0001013!7.87e-08!14;UBERON:0002616!1.60e-07!59;UBERON:0002465!3.00e-07!10;UBERON:0001049!3.43e-07!57;UBERON:0005068!3.43e-07!57;UBERON:0006241!3.43e-07!57;UBERON:0007135!3.43e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.44e-18;18!UBERON:0001986;4.44e-18;18!UBERON:0004852;4.44e-18;18!UBERON:0000487;1.04e-14;22!UBERON:0006914;3.00e-14;25!UBERON:0000055;6.00e-14;65!UBERON:0007500;1.11e-11;56!UBERON:0001981;1.11e-11;56!UBERON:0004537;1.11e-11;56!UBERON:0001637;1.57e-10;42!UBERON:0003509;1.57e-10;42!UBERON:0004572;1.57e-10;42!UBERON:0007100;1.82e-10;25!UBERON:0004573;5.18e-10;33!UBERON:0004571;5.18e-10;33!UBERON:0003915;1.20e-09;9!UBERON:0004700;1.20e-09;9!UBERON:0001917;1.20e-09;9!UBERON:0002049;1.38e-09;75!UBERON:0007798;1.38e-09;75!UBERON:0000948;9.81e-09;22!UBERON:0002465;3.63e-08;10!UBERON:0001013;4.19e-08;14!UBERON:0001473;1.24e-07;8!UBERON:0004536;1.24e-07;8!UBERON:0006558;1.24e-07;8!UBERON:0001009;1.66e-07;112!UBERON:0004535;1.89e-07;109!UBERON:0000490;2.15e-07;33!UBERON:0000947;2.77e-07;21!UBERON:0010191;2.77e-07;21!UBERON:0003914;2.80e-07;74 | |||
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| ||
|short_description=p2@ACVRL1 | |||
}} | }} |
Latest revision as of 20:43, 18 September 2015
Short description: | p2@ACVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACVRL1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 78bp_to_ENST00000267008, ENST00000388922, NM_000020, uc001rzj.2_5end |
EntrezGene: | ACVRL1 |
HGNC: | 175 |
UniProt: | P37023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.34e-23 | 24 |
endothelial cell | 2.04e-23 | 36 |
blood vessel endothelial cell | 4.61e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.61e-18 | 18 |
meso-epithelial cell | 7.21e-18 | 45 |
mesodermal cell | 3.14e-15 | 121 |
lining cell | 1.41e-11 | 58 |
barrier cell | 1.41e-11 | 58 |
endothelial cell of artery | 1.21e-09 | 9 |
fibroblast | 1.92e-09 | 76 |
fat cell | 1.98e-07 | 15 |
vein endothelial cell | 3.56e-07 | 6 |
lymphangioblast | 4.37e-07 | 6 |
endothelial cell of lymphatic vessel | 4.37e-07 | 6 |
vascular lymphangioblast | 4.37e-07 | 6 |
aortic endothelial cell | 5.69e-07 | 6 |