FFCP PHASE1:Hg19::chr4:124571409..124571447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285419 | |EntrezGene=285419 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000508111,ENST00000511919,ENST00000514823,uc003ifc.2_5end | |association_with_transcript=0bp_to_ENST00000508111,ENST00000511919,ENST00000514823,uc003ifc.2_5end | ||
|cluster_id=chr4:124571409..124571447,+ | |||
|description=CAGE_peak_3_at_LOC285419_5end | |description=CAGE_peak_3_at_LOC285419_5end | ||
|id=chr4:124571409..124571447,+ | |id=chr4:124571409..124571447,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.88e-09;12!CL:0000222;8.40e-08;1!CL:0002553;8.40e-08;1!CL:0002591;8.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.07e-09,12;CL:0000223,5.00e-08,58;CL:0002553,6.19e-08,1;CL:0002591,1.06e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.86e-10;30!UBERON:0004161;4.23e-10;11!UBERON:0009497;1.46e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.00e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.19e-10!347;UBERON:0007023!1.01e-08!115;UBERON:0005409!1.08e-08!35;UBERON:0004921!2.95e-08!129;UBERON:0004185!2.95e-08!129;UBERON:0000160!4.41e-08!27;UBERON:0001007!1.25e-07!155;UBERON:0001555!1.25e-07!155;UBERON:0007026!1.25e-07!155;UBERON:0000062!1.81e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.44e-14;2!UBERON:0001301;4.55e-08;1!UBERON:0002171;8.40e-08;1!UBERON:0002426;8.40e-08;1!UBERON:0003831;8.40e-08;1!UBERON:0003898;8.40e-08;1!UBERON:0004830;8.40e-08;1!UBERON:0006518;8.40e-08;1!UBERON:0008949;8.40e-08;1!UBERON:0003830;8.40e-08;1!UBERON:0005175;8.40e-08;1!UBERON:0001774;8.40e-08;1!UBERON:0000101;8.40e-08;1!UBERON:0001103;8.40e-08;1!UBERON:0002167;8.40e-08;1!UBERON:0003296;2.13e-07;4!UBERON:0010133;2.13e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.41e-14,2;UBERON:0000949,1.92e-08,45;UBERON:0004921,2.87e-08,118;UBERON:0001301,3.83e-08,1;UBERON:0002426,5.79e-08,1;UBERON:0003831,5.79e-08,1;UBERON:0003898,5.79e-08,1;UBERON:0004830,5.79e-08,1;UBERON:0003830,5.79e-08,1;UBERON:0005175,5.79e-08,1;UBERON:0001774,5.79e-08,1;UBERON:0001103,5.79e-08,1;UBERON:0010084,5.79e-08,1;UBERON:0002171,8.69e-08,1;UBERON:0006518,8.69e-08,1;UBERON:0008949,8.69e-08,1;UBERON:0000101,8.69e-08,1;UBERON:0002167,8.69e-08,1;UBERON:0003296,2.43e-07,4;UBERON:0010133,2.43e-07,4 | |||
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| ||
|short_description=p3@LOC285419 | |short_description=p3@LOC285419 | ||
}} | }} |
Latest revision as of 01:40, 25 September 2015
Short description: | p3@LOC285419 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC285419_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508111, ENST00000511919, ENST00000514823, uc003ifc.2_5end |
EntrezGene: | LOC285419 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.07e-09 | 12 |
endodermal cell | 5.00e-08 | 58 |
lung fibroblast | 6.19e-08 | 1 |
smooth muscle cell of the pulmonary artery | 1.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.41e-14 | 2 |
endocrine system | 1.92e-08 | 45 |
subdivision of digestive tract | 2.87e-08 | 118 |
epididymis | 3.83e-08 | 1 |
chest muscle | 5.79e-08 | 1 |
respiratory system muscle | 5.79e-08 | 1 |
skeletal muscle of trunk | 5.79e-08 | 1 |
respiratory system skeletal muscle | 5.79e-08 | 1 |
thoracic segment muscle | 5.79e-08 | 1 |
chest organ | 5.79e-08 | 1 |
muscle of trunk | 5.79e-08 | 1 |
diaphragm | 5.79e-08 | 1 |
future diaphragm | 5.79e-08 | 1 |
lower lobe of right lung | 8.69e-08 | 1 |
right lung lobe | 8.69e-08 | 1 |
lower lobe of lung | 8.69e-08 | 1 |
lobe of lung | 8.69e-08 | 1 |
right lung | 8.69e-08 | 1 |
gland of diencephalon | 2.43e-07 | 4 |
neuroendocrine gland | 2.43e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.00e-07 | 106 |