FFCP PHASE1:Hg19::chr1:154934200..154934274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90780 | |EntrezGene=90780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30257 | |HGNC=30257 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRQ0,Q5T170 | |UniProt=Q9BRQ0,Q5T170 | ||
|association_with_transcript=0bp_to_ENST00000368457,NM_138300,uc001fft.2_5end | |association_with_transcript=0bp_to_ENST00000368457,NM_138300,uc001fft.2_5end | ||
|cluster_id=chr1:154934200..154934274,- | |||
|description=CAGE_peak_1_at_PYGO2_5end | |description=CAGE_peak_1_at_PYGO2_5end | ||
|id=chr1:154934200..154934274,- | |id=chr1:154934200..154934274,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.79e-13!235;DOID:14566!1.44e-12!239;DOID:0050687!2.11e-11!143;DOID:305!1.41e-09!106 | |ontology_enrichment_disease=DOID:162!1.79e-13!235;DOID:14566!1.44e-12!239;DOID:0050687!2.11e-11!143;DOID:305!1.41e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.79e-13,235;DOID:14566,1.44e-12,239;DOID:0050687,2.11e-11,143;DOID:305,1.41e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.70e-14!115;UBERON:0000955!8.18e-10!69;UBERON:0006238!8.18e-10!69;UBERON:0000073!8.22e-10!94;UBERON:0001016!8.22e-10!94;UBERON:0005743!3.98e-09!86;UBERON:0001049!4.91e-09!57;UBERON:0005068!4.91e-09!57;UBERON:0006241!4.91e-09!57;UBERON:0007135!4.91e-09!57;UBERON:0001017!8.03e-09!82;UBERON:0003075!2.05e-08!86;UBERON:0007284!2.05e-08!86;UBERON:0002346!2.23e-08!90;UBERON:0003056!1.57e-07!61;UBERON:0002616!2.80e-07!59;UBERON:0000153!3.04e-07!129;UBERON:0007811!3.04e-07!129;UBERON:0003080!7.17e-07!42;UBERON:0000064!8.22e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.18e-13,114;UBERON:0011216,2.63e-11,223;UBERON:0000955,2.10e-09,68;UBERON:0006238,2.10e-09,68;UBERON:0001016,3.96e-09,89;UBERON:0001049,1.29e-08,56;UBERON:0005068,1.29e-08,56;UBERON:0006241,1.29e-08,56;UBERON:0007135,1.29e-08,56;UBERON:0000073,1.38e-08,53;UBERON:0002616,1.38e-08,53;UBERON:0001017,1.88e-08,81;UBERON:0003075,5.91e-08,82;UBERON:0007284,5.91e-08,82;UBERON:0002346,6.41e-08,86;UBERON:0003056,5.54e-07,61 | |||
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|short_description=p1@PYGO2 | |short_description=p1@PYGO2 | ||
}} | }} |
Latest revision as of 10:33, 17 September 2015
Short description: | p1@PYGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PYGO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368457, NM_138300, uc001fft.2_5end |
EntrezGene: | PYGO2 |
HGNC: | 30257 |
UniProt: | Q9BRQ0Q5T170 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.18e-13 | 114 |
organ system subdivision | 2.63e-11 | 223 |
brain | 2.10e-09 | 68 |
future brain | 2.10e-09 | 68 |
nervous system | 3.96e-09 | 89 |
neural tube | 1.29e-08 | 56 |
neural rod | 1.29e-08 | 56 |
future spinal cord | 1.29e-08 | 56 |
neural keel | 1.29e-08 | 56 |
regional part of nervous system | 1.38e-08 | 53 |
regional part of brain | 1.38e-08 | 53 |
central nervous system | 1.88e-08 | 81 |
neural plate | 5.91e-08 | 82 |
presumptive neural plate | 5.91e-08 | 82 |
neurectoderm | 6.41e-08 | 86 |
pre-chordal neural plate | 5.54e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.79e-13 | 235 |
disease of cellular proliferation | 1.44e-12 | 239 |
cell type cancer | 2.11e-11 | 143 |
carcinoma | 1.41e-09 | 106 |