FFCP PHASE1:Hg19::chr3:98250809..98250829,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2838 | |EntrezGene=2838 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4469 | |HGNC=4469 | ||
|TSSclassifier=strong | |||
|UniProt=B6V9G9,P49685 | |UniProt=B6V9G9,P49685 | ||
|association_with_transcript=-48bp_to_NM_005290,uc011bgy.1_5end | |association_with_transcript=-48bp_to_NM_005290,uc011bgy.1_5end | ||
|cluster_id=chr3:98250809..98250829,+ | |||
|coexpression_cluster_id=C2762 | |||
|description=CAGE_peak_1_at_GPR15_5end | |description=CAGE_peak_1_at_GPR15_5end | ||
|id=chr3:98250809..98250829,+ | |id=chr3:98250809..98250829,+ | ||
|ontology_enrichment_celltype=CL:0000838!5.00e-49!52;CL:0000542!8.29e-48!53;CL:0000051!8.29e-48!53;CL:0000738!1.17e-28!140;CL:0002087!2.55e-28!119;CL:0000791!1.86e-25!18;CL:0000789!1.86e-25!18;CL:0002420!1.86e-25!18;CL:0002419!1.86e-25!18;CL:0000790!1.86e-25!18;CL:0000945!4.31e-25!24;CL:0000826!4.31e-25!24;CL:0002031!5.77e-24!124;CL:0000084!2.32e-21!25;CL:0000827!2.32e-21!25;CL:0000988!4.18e-20!182;CL:0000037!9.82e-20!172;CL:0000566!9.82e-20!172;CL:0002032!1.45e-18!165;CL:0000837!1.45e-18!165;CL:0000236!2.05e-17!14;CL:0000625!5.40e-16!11;CL:0000624!1.59e-09!6;CL:0000080!2.53e-08!6 | |ontology_enrichment_celltype=CL:0000838!5.00e-49!52;CL:0000542!8.29e-48!53;CL:0000051!8.29e-48!53;CL:0000738!1.17e-28!140;CL:0002087!2.55e-28!119;CL:0000791!1.86e-25!18;CL:0000789!1.86e-25!18;CL:0002420!1.86e-25!18;CL:0002419!1.86e-25!18;CL:0000790!1.86e-25!18;CL:0000945!4.31e-25!24;CL:0000826!4.31e-25!24;CL:0002031!5.77e-24!124;CL:0000084!2.32e-21!25;CL:0000827!2.32e-21!25;CL:0000988!4.18e-20!182;CL:0000037!9.82e-20!172;CL:0000566!9.82e-20!172;CL:0002032!1.45e-18!165;CL:0000837!1.45e-18!165;CL:0000236!2.05e-17!14;CL:0000625!5.40e-16!11;CL:0000624!1.59e-09!6;CL:0000080!2.53e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000542;5.95e-33;53!CL:0000945;3.93e-32;24!CL:0000791;8.09e-31;18!CL:0000789;8.09e-31;18!CL:0002419;8.09e-31;18!CL:0000084;4.05e-27;25!CL:0000236;1.72e-23;13!CL:0000625;4.56e-20;11!CL:0002087;3.52e-12;104!CL:0000624;4.30e-10;6!CL:0000226;5.67e-07;3!CL:0000842;5.67e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.59e-61,52;CL:0000542,2.00e-59,53;CL:0000051,2.00e-59,53;CL:0000945,4.00e-32,24;CL:0000826,4.00e-32,24;CL:0002087,4.49e-31,115;CL:0000791,7.13e-31,18;CL:0000789,7.13e-31,18;CL:0002420,7.13e-31,18;CL:0002419,7.13e-31,18;CL:0000790,7.13e-31,18;CL:0000084,3.60e-27,25;CL:0000827,3.60e-27,25;CL:0000738,5.43e-27,136;CL:0000236,6.62e-26,14;CL:0002031,6.62e-25,120;CL:0000625,5.31e-20,11;CL:0000037,1.92e-19,168;CL:0000988,8.02e-18,177;CL:0002032,1.30e-17,161;CL:0000837,1.30e-17,161;CL:0000624,3.28e-10,6;CL:0000226,4.30e-07,3;CL:0000842,4.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;5.95e-33;53!CL:0000790;8.09e-31;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.29e-14!15;UBERON:0000179!1.29e-14!15;UBERON:0000463!1.29e-14!15;UBERON:0004177!1.39e-10!7;UBERON:0007023!6.09e-08!115;UBERON:0002370!6.60e-07!4;UBERON:0005058!6.60e-07!4;UBERON:0009113!6.60e-07!4;UBERON:0003295!6.60e-07!4;UBERON:0005562!6.60e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.71e-13;15!UBERON:0000179;3.71e-13;15!UBERON:0000463;3.71e-13;15!UBERON:0002390;1.76e-09;32!UBERON:0002193;4.77e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.89e-13,15;UBERON:0000179,2.89e-13,15;UBERON:0000463,2.89e-13,15;UBERON:0004177,8.10e-09,7;UBERON:0005057,8.10e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0865695587296,9.35946719729382,10.6259554773467,0.393364276848904,1.15148819429164,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,1.20326668482085,0.434021741431704,0,1.94336199611388,0.77272670290256,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0,0,1.03423704220986,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,3.27683166757279,4.44754626931777,2.98711155796555,2.80277190925209,4.02326707968138,3.30522436392431,1.90810750907073,1.1384259382189,2.93618594685469,5.73409842187843,0,1.12101712596307,0,3.540775862049,1.96505381374582,6.99045096598331,104.658746114564,0.32592226663359,1.4203434172042,0,267.719327895072,14.7302953737419,28.7994062958707,18.6854665997861,210.966403588187,264.930890979472,88.3031547721741,91.7482059049017,69.8425436621476,0.296573126324121,1.07016331235885,1.04535523804977,133.025168326943,15.3288197440768,34.362744548263,26.3140479700283,11.1497895013434,9.76625180784628,13.3063286222772,2.86092726247768,3.71161172347813,2.49861453104692,12.0756398542449,10.6746639599736,1.20964045934839,0.267440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1333711423753,0.591092280605782,1.07813787429759,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.50999940573032,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,1.52234282769651,0,2.84823593587081,3.57347663186684,2.87953591160336,1.29694662238543,0,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07824614168525,0,0,139.947423809236,0,2.06697207638852,0,0,1.28236427328014,19.1586473877552,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,1.93701494939902,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,7.34197785377715,0,0.593042257361244,0.741383633679017,0.939797545549098,0,0,0,4.19646015196032,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872901148395775,0,0,0,0,0,0,0,1.49417096317547,0,0,0.458146384663663,0,0,0,0,0,0,0,0,0,0,0,0,18.402114799552,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,10.9156524798629,0,23.0188010939893,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,1.19578356282027,0.490696182767533,0,0,0,4.79969750051832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,125.374578460688,0,0.0679697329768317,0,0,0,0.863424021355654,0,0,0,0,0,0.142953088353313,0,9.53179688018627,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0.5647304101948,0,0.150962843566674,0.540219106755613,0,0,0.980593287015622,0,0,0,0,0,1.78569444161722,0.193373663920732,406.560622302611,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0,1.55013383606415,0.620747142958579,0,0.0636471582781649,0,1.08858373948481,0,12.5274818607133,2.86888821570705,0,0,0,0,0,0,0,0,0,0,41.3533355071171 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0865695587296,9.35946719729382,10.6259554773467,0.393364276848904,1.15148819429164,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,1.20326668482085,0.434021741431704,0,1.94336199611388,0.77272670290256,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0,0,1.03423704220986,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,7.03984977845291,3.27683166757279,4.44754626931777,2.98711155796555,2.80277190925209,4.02326707968138,3.30522436392431,1.90810750907073,1.1384259382189,2.93618594685469,5.73409842187843,0,1.12101712596307,0,3.540775862049,1.96505381374582,6.99045096598331,104.658746114564,0.32592226663359,1.4203434172042,0,267.719327895072,14.7302953737419,28.7994062958707,18.6854665997861,210.966403588187,264.930890979472,88.3031547721741,91.7482059049017,69.8425436621476,0.296573126324121,1.07016331235885,1.04535523804977,133.025168326943,15.3288197440768,34.362744548263,26.3140479700283,11.1497895013434,9.76625180784628,13.3063286222772,2.86092726247768,3.71161172347813,2.49861453104692,12.0756398542449,10.6746639599736,1.20964045934839,0.267440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1333711423753,0.591092280605782,1.07813787429759,1.15508732651774,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.50999940573032,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,1.52234282769651,0,2.84823593587081,3.57347663186684,2.87953591160336,1.29694662238543,0,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07824614168525,0,0,139.947423809236,0,2.06697207638852,0,0,1.28236427328014,19.1586473877552,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,1.93701494939902,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,7.34197785377715,0,0.593042257361244,0.741383633679017,0.939797545549098,0,0,0,4.19646015196032,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872901148395775,0,0,0,0,0,0,0,1.49417096317547,0,0,0.458146384663663,0,0,0,0,0,0,0,0,0,0,0,0,18.402114799552,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,10.9156524798629,0,23.0188010939893,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,1.19578356282027,0.490696182767533,0,0,0,4.79969750051832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,125.374578460688,0,0.0679697329768317,0,0,0,0.863424021355654,0,0,0,0,0,0.142953088353313,0,9.53179688018627,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0.5647304101948,0,0.150962843566674,0.540219106755613,0,0,0.980593287015622,0,0,0,0,0,1.78569444161722,0.193373663920732,406.560622302611,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0,1.55013383606415,0.620747142958579,0,0.0636471582781649,0,1.08858373948481,0,12.5274818607133,2.86888821570705,0,0,0,0,0,0,0,0,0,0,41.3533355071171 | ||
|short_description=p1@GPR15 | |short_description=p1@GPR15 | ||
}} | }} |
Latest revision as of 21:56, 19 September 2015
Short description: | p1@GPR15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR15_5end |
Coexpression cluster: | C2762_splenic_CD4_b_plasma_xeroderma_NK_lymphoma |
Association with transcript: | -48bp_to_NM_005290, uc011bgy.1_5end |
EntrezGene: | GPR15 |
HGNC: | 4469 |
UniProt: | B6V9G9P49685 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.59e-61 | 52 |
lymphocyte | 2.00e-59 | 53 |
common lymphoid progenitor | 2.00e-59 | 53 |
lymphocyte of B lineage | 4.00e-32 | 24 |
pro-B cell | 4.00e-32 | 24 |
nongranular leukocyte | 4.49e-31 | 115 |
mature alpha-beta T cell | 7.13e-31 | 18 |
alpha-beta T cell | 7.13e-31 | 18 |
immature T cell | 7.13e-31 | 18 |
mature T cell | 7.13e-31 | 18 |
immature alpha-beta T cell | 7.13e-31 | 18 |
T cell | 3.60e-27 | 25 |
pro-T cell | 3.60e-27 | 25 |
leukocyte | 5.43e-27 | 136 |
B cell | 6.62e-26 | 14 |
hematopoietic lineage restricted progenitor cell | 6.62e-25 | 120 |
CD8-positive, alpha-beta T cell | 5.31e-20 | 11 |
hematopoietic stem cell | 1.92e-19 | 168 |
hematopoietic cell | 8.02e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.30e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-17 | 161 |
CD4-positive, alpha-beta T cell | 3.28e-10 | 6 |
single nucleate cell | 4.30e-07 | 3 |
mononuclear cell | 4.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.89e-13 | 15 |
haemolymphatic fluid | 2.89e-13 | 15 |
organism substance | 2.89e-13 | 15 |
hemopoietic organ | 8.10e-09 | 7 |
immune organ | 8.10e-09 | 7 |