FFCP PHASE1:Hg19::chr1:149908710..149908794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10903 | |EntrezGene=10903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24307 | |HGNC=24307 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8W0,A4FU01 | |UniProt=F8W8W0,A4FU01 | ||
|association_with_transcript=0bp_to_ENST00000361405,ENST00000405710,ENST00000406732,ENST00000439741,ENST00000466496,ENST00000482025,ENST00000482343,ENST00000492824,NM_001145862,uc001etl.3,uc010pbo.1_5end | |association_with_transcript=0bp_to_ENST00000361405,ENST00000405710,ENST00000406732,ENST00000439741,ENST00000466496,ENST00000482025,ENST00000482343,ENST00000492824,NM_001145862,uc001etl.3,uc010pbo.1_5end | ||
|cluster_id=chr1:149908710..149908794,- | |||
|description=CAGE_peak_2_at_MTMR11_5end | |description=CAGE_peak_2_at_MTMR11_5end | ||
|id=chr1:149908710..149908794,- | |id=chr1:149908710..149908794,- | ||
|ontology_enrichment_celltype=CL:0000055!3.40e-18!180;CL:0000057!6.57e-09!75 | |ontology_enrichment_celltype=CL:0000055!3.40e-18!180;CL:0000057!6.57e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000243;7.70e-07;15!CL:0000125;7.70e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.14e-09,76;CL:0000243,7.93e-07,15;CL:0000125,7.93e-07,15;CL:0000030,7.93e-07,15;CL:0000339,7.93e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;7.70e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.72e-23!365;UBERON:0000468!1.74e-19!659;UBERON:0000481!3.66e-18!347;UBERON:0004121!9.78e-16!169;UBERON:0000924!4.08e-15!173;UBERON:0006601!4.08e-15!173;UBERON:0000467!5.78e-15!625;UBERON:0000480!8.53e-15!626;UBERON:0000922!1.60e-12!612;UBERON:0000062!1.80e-12!511;UBERON:0000064!1.93e-12!219;UBERON:0002050!2.40e-12!605;UBERON:0005423!2.40e-12!605;UBERON:0000923!5.85e-12!604;UBERON:0005291!5.85e-12!604;UBERON:0006598!5.85e-12!604;UBERON:0002532!5.85e-12!604;UBERON:0000119!7.28e-12!312;UBERON:0000483!1.55e-11!309;UBERON:0000033!5.93e-11!123;UBERON:0000153!4.32e-10!129;UBERON:0007811!4.32e-10!129;UBERON:0003075!6.84e-09!86;UBERON:0007284!6.84e-09!86;UBERON:0002100!1.23e-08!216;UBERON:0000486!1.89e-08!82;UBERON:0002346!2.98e-08!90;UBERON:0000477!7.24e-08!286;UBERON:0003102!1.94e-07!95;UBERON:0000073!2.32e-07!94;UBERON:0001016!2.32e-07!94;UBERON:0005631!2.87e-07!14;UBERON:0000158!2.87e-07!14;UBERON:0001017!4.03e-07!82;UBERON:0005743!4.98e-07!86;UBERON:0004111!9.30e-07!241;UBERON:0000914!9.62e-07!83;UBERON:0002329!9.62e-07!83;UBERON:0003077!9.62e-07!83;UBERON:0003059!9.62e-07!83;UBERON:0007282!9.62e-07!83;UBERON:0009618!9.62e-07!83;UBERON:0007285!9.62e-07!83 | |ontology_enrichment_uberon=UBERON:0000475!1.72e-23!365;UBERON:0000468!1.74e-19!659;UBERON:0000481!3.66e-18!347;UBERON:0004121!9.78e-16!169;UBERON:0000924!4.08e-15!173;UBERON:0006601!4.08e-15!173;UBERON:0000467!5.78e-15!625;UBERON:0000480!8.53e-15!626;UBERON:0000922!1.60e-12!612;UBERON:0000062!1.80e-12!511;UBERON:0000064!1.93e-12!219;UBERON:0002050!2.40e-12!605;UBERON:0005423!2.40e-12!605;UBERON:0000923!5.85e-12!604;UBERON:0005291!5.85e-12!604;UBERON:0006598!5.85e-12!604;UBERON:0002532!5.85e-12!604;UBERON:0000119!7.28e-12!312;UBERON:0000483!1.55e-11!309;UBERON:0000033!5.93e-11!123;UBERON:0000153!4.32e-10!129;UBERON:0007811!4.32e-10!129;UBERON:0003075!6.84e-09!86;UBERON:0007284!6.84e-09!86;UBERON:0002100!1.23e-08!216;UBERON:0000486!1.89e-08!82;UBERON:0002346!2.98e-08!90;UBERON:0000477!7.24e-08!286;UBERON:0003102!1.94e-07!95;UBERON:0000073!2.32e-07!94;UBERON:0001016!2.32e-07!94;UBERON:0005631!2.87e-07!14;UBERON:0000158!2.87e-07!14;UBERON:0001017!4.03e-07!82;UBERON:0005743!4.98e-07!86;UBERON:0004111!9.30e-07!241;UBERON:0000914!9.62e-07!83;UBERON:0002329!9.62e-07!83;UBERON:0003077!9.62e-07!83;UBERON:0003059!9.62e-07!83;UBERON:0007282!9.62e-07!83;UBERON:0009618!9.62e-07!83;UBERON:0007285!9.62e-07!83 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@MTMR11 | |short_description=p2@MTMR11 | ||
}} | }} |
Latest revision as of 21:03, 16 September 2015
Short description: | p2@MTMR11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTMR11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361405, ENST00000405710, ENST00000406732, ENST00000439741, ENST00000466496, ENST00000482025, ENST00000482343, ENST00000492824, NM_001145862, uc001etl.3, uc010pbo.1_5end |
EntrezGene: | MTMR11 |
HGNC: | 24307 |
UniProt: | F8W8W0A4FU01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.14e-09 | 76 |
glial cell (sensu Vertebrata) | 7.93e-07 | 15 |
glial cell | 7.93e-07 | 15 |
glioblast | 7.93e-07 | 15 |
glioblast (sensu Vertebrata) | 7.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.33e-15 | 171 |
ectoderm | 6.33e-15 | 171 |
presumptive ectoderm | 6.33e-15 | 171 |
cell layer | 5.67e-11 | 309 |
epithelium | 1.18e-10 | 306 |
structure with developmental contribution from neural crest | 1.32e-09 | 132 |
ecto-epithelium | 3.73e-09 | 104 |
embryo | 4.56e-09 | 592 |
neural plate | 5.38e-09 | 82 |
presumptive neural plate | 5.38e-09 | 82 |
developing anatomical structure | 1.15e-08 | 581 |
multilaminar epithelium | 1.20e-08 | 83 |
neurectoderm | 2.34e-08 | 86 |
organ component layer | 1.27e-07 | 66 |
embryonic structure | 2.36e-07 | 564 |
extraembryonic membrane | 2.36e-07 | 14 |
membranous layer | 2.36e-07 | 14 |
surface structure | 3.03e-07 | 99 |
mesenchyme | 3.53e-07 | 160 |
entire embryonic mesenchyme | 3.53e-07 | 160 |
nervous system | 6.15e-07 | 89 |
germ layer | 6.59e-07 | 560 |
germ layer / neural crest | 6.59e-07 | 560 |
embryonic tissue | 6.59e-07 | 560 |
presumptive structure | 6.59e-07 | 560 |
germ layer / neural crest derived structure | 6.59e-07 | 560 |
epiblast (generic) | 6.59e-07 | 560 |