FFCP PHASE1:Hg19::chr12:4918462..4918475,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:4918462..4918475,+
|short_description=p2@KCNA6
|description=CAGE_peak_2_at_KCNA6_5end
|association_with_transcript=120bp_to_ENST00000280684,ENST0000043385...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3742 | |EntrezGene=3742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6225 | |HGNC=6225 | ||
|TSSclassifier=strong | |||
|UniProt=P17658 | |UniProt=P17658 | ||
|association_with_transcript=120bp_to_ENST00000280684,ENST00000433855,NM_002235,uc001qng.2_5end | |||
|cluster_id=chr12:4918462..4918475,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_KCNA6_5end | |||
|id=chr12:4918462..4918475,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.86e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.21e-56!57;UBERON:0005068!3.21e-56!57;UBERON:0006241!3.21e-56!57;UBERON:0007135!3.21e-56!57;UBERON:0003075!1.33e-53!86;UBERON:0007284!1.33e-53!86;UBERON:0005743!3.84e-52!86;UBERON:0001017!1.46e-51!82;UBERON:0002346!2.79e-50!90;UBERON:0002616!2.98e-46!59;UBERON:0000073!2.74e-45!94;UBERON:0001016!2.74e-45!94;UBERON:0000955!1.64e-44!69;UBERON:0006238!1.64e-44!69;UBERON:0003080!9.85e-42!42;UBERON:0002780!1.68e-40!41;UBERON:0001890!1.68e-40!41;UBERON:0006240!1.68e-40!41;UBERON:0003056!4.33e-40!61;UBERON:0001893!1.22e-39!34;UBERON:0002020!2.22e-39!34;UBERON:0003528!2.22e-39!34;UBERON:0002791!4.05e-38!33;UBERON:0001869!8.08e-37!32;UBERON:0000956!2.24e-33!25;UBERON:0000203!2.24e-33!25;UBERON:0007023!2.44e-32!115;UBERON:0000153!8.06e-31!129;UBERON:0007811!8.06e-31!129;UBERON:0002619!1.06e-30!22;UBERON:0000033!1.02e-29!123;UBERON:0001950!6.69e-28!20;UBERON:0004121!1.28e-26!169;UBERON:0000924!1.69e-25!173;UBERON:0006601!1.69e-25!173;UBERON:0000025!1.75e-17!194;UBERON:0000119!1.21e-15!312;UBERON:0000064!1.25e-15!219;UBERON:0003076!4.71e-15!15;UBERON:0003057!4.71e-15!15;UBERON:0000483!5.97e-15!309;UBERON:0004111!5.74e-12!241;UBERON:0002298!6.44e-12!8;UBERON:0000477!2.23e-11!286;UBERON:0000481!2.41e-11!347;UBERON:0004733!3.43e-11!12;UBERON:0002028!3.43e-11!12;UBERON:0007277!3.43e-11!12;UBERON:0000475!3.02e-10!365;UBERON:0004732!3.99e-10!13;UBERON:0000200!4.59e-10!6;UBERON:0001871!1.92e-09!7;UBERON:0002021!6.80e-09!5;UBERON:0001872!1.40e-08!5;UBERON:0000349!2.72e-08!5;UBERON:0000922!6.52e-08!612;UBERON:0002308!8.09e-08!9;UBERON:0000125!8.09e-08!9;UBERON:0002420!9.92e-08!9;UBERON:0007245!9.92e-08!9;UBERON:0010009!9.92e-08!9;UBERON:0010011!9.92e-08!9;UBERON:0000454!9.92e-08!9;UBERON:0002680!1.16e-07!9;UBERON:0001895!1.16e-07!9;UBERON:0010092!1.16e-07!9;UBERON:0000062!8.65e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.08e-63;22!UBERON:0000956;2.11e-55;25!UBERON:0000203;2.11e-55;25!UBERON:0001950;5.35e-54;20!UBERON:0003528;2.76e-52;34!UBERON:0002020;2.76e-52;34!UBERON:0001893;1.57e-50;34!UBERON:0001869;1.25e-46;32!UBERON:0002791;2.13e-46;32!UBERON:0002780;5.53e-42;41!UBERON:0001890;5.53e-42;41!UBERON:0000073;2.34e-35;53!UBERON:0002616;2.34e-35;53!UBERON:0000200;3.18e-22;6!UBERON:0001017;8.77e-22;75!UBERON:0000955;1.45e-21;68!UBERON:0001016;3.31e-19;83!UBERON:0002021;7.00e-18;5!UBERON:0001872;3.25e-17;5!UBERON:0001870;1.19e-16;3!UBERON:0000988;3.10e-16;3!UBERON:0002298;4.21e-14;6!UBERON:0001954;2.10e-11;2!UBERON:0002148;2.10e-11;2!UBERON:0002702;2.10e-11;2!UBERON:0006331;2.10e-11;2!UBERON:0009662;2.10e-11;2!UBERON:0003022;2.10e-11;2!UBERON:0002421;2.10e-11;2!UBERON:0002600;2.10e-11;2!UBERON:0000349;5.99e-10;5!UBERON:0000125;1.91e-09;9!UBERON:0002308;1.91e-09;9!UBERON:0007023;2.36e-08;114!UBERON:0011216;9.88e-08;132!UBERON:0001871;2.09e-07;6!UBERON:0004733;4.17e-07;12!UBERON:0002028;4.17e-07;12!UBERON:0002581;5.89e-07;1!UBERON:0002902;5.89e-07;1!UBERON:0003112;5.89e-07;1!UBERON:0011158;5.89e-07;1!UBERON:0009899;5.89e-07;1!UBERON:0007190;5.89e-07;1!UBERON:0003128;5.89e-07;1!UBERON:0001703;5.89e-07;1!UBERON:0002241;5.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.66e-63,22;UBERON:0001893,2.28e-62,34;UBERON:0001049,5.29e-62,56;UBERON:0005068,5.29e-62,56;UBERON:0006241,5.29e-62,56;UBERON:0007135,5.29e-62,56;UBERON:0003528,9.28e-62,34;UBERON:0002020,9.28e-62,34;UBERON:0000073,1.62e-60,53;UBERON:0002616,1.62e-60,53;UBERON:0002780,1.65e-56,41;UBERON:0001890,1.65e-56,41;UBERON:0003080,1.65e-56,41;UBERON:0006240,1.65e-56,41;UBERON:0000956,9.56e-56,25;UBERON:0000203,9.56e-56,25;UBERON:0001950,1.78e-54,20;UBERON:0001869,3.24e-54,32;UBERON:0002791,7.63e-54,32;UBERON:0000955,1.88e-53,68;UBERON:0006238,1.88e-53,68;UBERON:0001017,1.85e-51,81;UBERON:0001016,7.89e-46,89;UBERON:0003075,4.27e-44,82;UBERON:0007284,4.27e-44,82;UBERON:0002346,8.46e-42,86;UBERON:0003056,2.70e-40,61;UBERON:0010371,2.53e-36,104;UBERON:0010314,1.61e-27,132;UBERON:0004121,7.66e-25,171;UBERON:0000924,7.66e-25,171;UBERON:0006601,7.66e-25,171;UBERON:0007023,1.07e-23,114;UBERON:0000200,1.76e-22,6;UBERON:0011216,1.24e-20,223;UBERON:0002021,4.78e-18,5;UBERON:0001872,3.01e-17,5;UBERON:0000025,4.87e-17,192;UBERON:0001870,8.48e-17,3;UBERON:0000988,9.62e-16,3;UBERON:0002298,1.11e-13,6;UBERON:0004111,1.95e-12,240;UBERON:0002702,1.18e-11,2;UBERON:0001954,2.90e-11,2;UBERON:0003022,2.90e-11,2;UBERON:0002421,2.90e-11,2;UBERON:0002600,2.90e-11,2;UBERON:0002148,6.69e-11,2;UBERON:0006331,6.69e-11,2;UBERON:0009662,6.69e-11,2;UBERON:0000483,3.07e-10,306;UBERON:0000119,4.44e-10,309;UBERON:0000349,9.42e-10,5;UBERON:0000125,4.98e-09,9;UBERON:0002308,4.98e-09,9;UBERON:0003076,1.88e-08,15;UBERON:0003057,1.88e-08,15;UBERON:0001871,1.94e-07,6;UBERON:0003112,5.43e-07,1;UBERON:0011158,5.43e-07,1;UBERON:0003128,5.43e-07,1;UBERON:0001703,5.43e-07,1;UBERON:0002241,5.43e-07,1;UBERON:0004761,5.43e-07,1;UBERON:0009617,5.43e-07,1;UBERON:0002581,6.08e-07,1;UBERON:0002902,6.43e-07,1;UBERON:0009899,6.43e-07,1;UBERON:0004733,6.61e-07,12;UBERON:0002028,6.61e-07,12;UBERON:0007277,6.61e-07,12;UBERON:0007190,6.80e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0.940364164434263,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.365921118388786,0.397589304964456,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.429680979473094,0.290033387828457,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.04089815956073,1.99613798001194,0,0,0.724999575434793,0,0,0,1.37897349296586,0,0,0.885741385813839,0.964771509003264,0,0.552896299656123,0,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,1.7524294574976,0,0.468528891450678,0,0,0,0,0,1.22429104652196,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,2.02594547058812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,1.59045937961861,1.0896272488926,0.160753148465019,0.412618309791701,0.415440338029185,0,0,1.76173714308272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.0342636508924,1.05786081394152,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,1.77213635993397,0.488105059607853,1.502291168478,0.573409195690071,0.776503360757966,1.17983165588629,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.65910123382077,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,1.09189682663981,2.8339315265117,1.75597244962866,0.82046545696302,2.52071696221718,2.14387482639075,2.58361033010962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,0.781078098613847,1.44680757550829,1.8390584956233,1.09394961803644,0,0.496211178389294,0,0,0,0.336283722218824,0,0.91064876540519,0,0,0,1.4953341254903,2.23627430113687,0,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0,0.214429632529969,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42704108933082,0.11294608203896,0.109940516745429,0,0.154348316215889,0.874238242015829,0,0,0,0.785233868459781,0.891139200981258,2.9585900930838,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,1.00337708206016,0,2.92363407820933,3.9271562130634,0.5290268405154,0.371995018166751,0,0,0.504665699340316,0.874124575709564,3.16746252528592,0.509944148709909,0.26721740526556,0.0918948995348449,0.250707539292375,0.227336094654718,0,0,1.86179392551411,0.213233981900981,0.714193294391221,0,0.0620747142958579,0,0,0.404234377916439,0,0.342233301085281,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0.940364164434263,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.365921118388786,0.397589304964456,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.429680979473094,0.290033387828457,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.04089815956073,1.99613798001194,0,0,0.724999575434793,0,0,0,1.37897349296586,0,0,0.885741385813839,0.964771509003264,0,0.552896299656123,0,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,1.7524294574976,0,0.468528891450678,0,0,0,0,0,1.22429104652196,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,2.02594547058812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,1.59045937961861,1.0896272488926,0.160753148465019,0.412618309791701,0.415440338029185,0,0,1.76173714308272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.0342636508924,1.05786081394152,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0,0,1.77213635993397,0.488105059607853,1.502291168478,0.573409195690071,0.776503360757966,1.17983165588629,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.65910123382077,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,1.09189682663981,2.8339315265117,1.75597244962866,0.82046545696302,2.52071696221718,2.14387482639075,2.58361033010962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,0.781078098613847,1.44680757550829,1.8390584956233,1.09394961803644,0,0.496211178389294,0,0,0,0.336283722218824,0,0.91064876540519,0,0,0,1.4953341254903,2.23627430113687,0,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0,0.214429632529969,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42704108933082,0.11294608203896,0.109940516745429,0,0.154348316215889,0.874238242015829,0,0,0,0.785233868459781,0.891139200981258,2.9585900930838,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,1.00337708206016,0,2.92363407820933,3.9271562130634,0.5290268405154,0.371995018166751,0,0,0.504665699340316,0.874124575709564,3.16746252528592,0.509944148709909,0.26721740526556,0.0918948995348449,0.250707539292375,0.227336094654718,0,0,1.86179392551411,0.213233981900981,0.714193294391221,0,0.0620747142958579,0,0,0.404234377916439,0,0.342233301085281,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p2@KCNA6 | |||
}} | }} |
Latest revision as of 14:21, 18 September 2015
Short description: | p2@KCNA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNA6_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 120bp_to_ENST00000280684, ENST00000433855, NM_002235, uc001qng.2_5end |
EntrezGene: | KCNA6 |
HGNC: | 6225 |
UniProt: | P17658 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data