FFCP PHASE1:Hg19::chr12:47432458..47432475,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:47432458..47432475,+
|short_description=p@chr12:47432458..47432475,+
|description=CAGE_peak_at_chr12:47432458..47432475,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:47432458..47432475,+ | |||
|description=CAGE_peak_at_chr12:47432458..47432475,+ | |||
|id=chr12:47432458..47432475,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.25e-12!42;CL:0000860!3.42e-11!45;CL:0000839!7.39e-11!70;CL:0000557!1.30e-10!71;CL:0000766!2.24e-10!76;CL:1000507!4.94e-10!12;CL:1000494!4.94e-10!12;CL:0002194!4.41e-08!63;CL:0000576!4.41e-08!63;CL:0000040!4.41e-08!63;CL:0000559!4.41e-08!63;CL:1000497!7.42e-08!18;CL:0002518!7.42e-08!18;CL:0002009!1.13e-07!65;CL:0000763!1.58e-07!112;CL:0000049!1.58e-07!112;CL:0002274!1.93e-07!5;CL:0000457!1.93e-07!5;CL:0002191!1.93e-07!5;CL:0000097!1.93e-07!5;CL:0000831!1.93e-07!5;CL:0002028!1.93e-07!5;CL:0002541!4.14e-07!3;CL:1000449!4.27e-07!16 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.14e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr12:47432458..47432475,+ | |||
}} | }} |
Latest revision as of 08:44, 24 July 2015
Short description: | p@chr12:47432458..47432475, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47432458..47432475, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.74e-17 | 10 |
nephron tubule epithelial cell | 5.74e-17 | 10 |
kidney cell | 5.38e-14 | 17 |
kidney epithelial cell | 5.38e-14 | 17 |
mast cell | 3.28e-13 | 5 |
basophil mast progenitor cell | 3.28e-13 | 5 |
myeloid lineage restricted progenitor cell | 3.66e-12 | 66 |
granulocyte monocyte progenitor cell | 5.96e-12 | 67 |
classical monocyte | 2.35e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-11 | 42 |
epithelial cell of nephron | 3.00e-11 | 15 |
myeloid leukocyte | 5.57e-11 | 72 |
chorionic membrane mesenchymal stem cell | 4.79e-10 | 3 |
defensive cell | 9.24e-10 | 48 |
phagocyte | 9.24e-10 | 48 |
myeloid cell | 6.60e-08 | 108 |
common myeloid progenitor | 6.60e-08 | 108 |
endocrine cell | 1.53e-07 | 9 |
monopoietic cell | 1.57e-07 | 59 |
monocyte | 1.57e-07 | 59 |
monoblast | 1.57e-07 | 59 |
promonocyte | 1.57e-07 | 59 |
macrophage dendritic cell progenitor | 3.03e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.74e-17 | 10 |
excretory tube | 9.87e-15 | 16 |
kidney epithelium | 9.87e-15 | 16 |
kidney | 6.07e-12 | 26 |
kidney mesenchyme | 6.07e-12 | 26 |
upper urinary tract | 6.07e-12 | 26 |
kidney rudiment | 6.07e-12 | 26 |
kidney field | 6.07e-12 | 26 |
nephron epithelium | 3.00e-11 | 15 |
renal tubule | 3.00e-11 | 15 |
nephron tubule | 3.00e-11 | 15 |
nephron | 3.00e-11 | 15 |
uriniferous tubule | 3.00e-11 | 15 |
nephrogenic mesenchyme | 3.00e-11 | 15 |
bone marrow | 2.70e-10 | 76 |
urinary system structure | 3.30e-10 | 47 |
egg chorion | 4.79e-10 | 3 |
renal system | 5.77e-10 | 48 |
cavitated compound organ | 7.01e-10 | 31 |
bone element | 2.16e-09 | 82 |
skeletal element | 2.24e-08 | 90 |
immune system | 4.87e-08 | 93 |
hepatopancreatic ampulla | 7.10e-08 | 1 |
extrahepatic bile duct | 7.10e-08 | 1 |
common bile duct | 7.10e-08 | 1 |
duodenal papilla | 7.10e-08 | 1 |
epididymis | 9.94e-08 | 1 |
hematopoietic system | 1.59e-07 | 98 |
blood island | 1.59e-07 | 98 |
skeletal system | 2.48e-07 | 100 |