FFCP PHASE1:Hg19::chr1:119869778..119869800,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=125bp_to_ENST00000457719_5end | |association_with_transcript=125bp_to_ENST00000457719_5end | ||
|cluster_id=chr1:119869778..119869800,- | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_3_at_ENST00000457719_5end | |description=CAGE_peak_3_at_ENST00000457719_5end | ||
|id=chr1:119869778..119869800,- | |id=chr1:119869778..119869800,- | ||
|ontology_enrichment_celltype=CL:0000784!8.84e-13!3;CL:0002322!5.89e-08!5 | |ontology_enrichment_celltype=CL:0000784!8.84e-13!3;CL:0002322!5.89e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.61e-34;2!CL:0000322;4.09e-23;3!CL:0002563;7.35e-18;4!CL:0002202;1.21e-08;9!CL:0002632;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.61e-34,2;CL:0000322,4.09e-23,3;CL:0002563,7.35e-18,4;CL:0002202,1.21e-08,9;CL:0002632,1.21e-08,9;CL:0002076,2.10e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.80e-10!1;DOID:1357!1.80e-10!1 | |ontology_enrichment_disease=DOID:0050619!1.80e-10!1;DOID:1357!1.80e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.39e-66;1!DOID:1357;2.39e-66;1!DOID:3910;7.05e-34;2!DOID:0050615;1.51e-17;16!DOID:3908;1.83e-14;5!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.39e-66,1;DOID:1357,2.39e-66,1;DOID:3910,7.05e-34,2;DOID:0050615,1.51e-17,16;DOID:3908,1.83e-14,5;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.27e-11!7;UBERON:0001764!1.80e-10!1;UBERON:0001825!1.80e-10!1;UBERON:0002372!8.24e-10!1;UBERON:0001961!8.24e-10!1;UBERON:0001744!8.24e-10!1;UBERON:0001735!8.24e-10!1;UBERON:0002370!2.44e-09!4;UBERON:0005058!2.44e-09!4;UBERON:0009113!2.44e-09!4;UBERON:0003295!2.44e-09!4;UBERON:0005562!2.44e-09!4;UBERON:0001042!3.87e-08!10;UBERON:0009145!3.87e-08!10;UBERON:0005057!4.98e-08!26;UBERON:0006562!1.92e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.39e-66;1!UBERON:0001825;2.39e-66;1!UBERON:0004903;7.05e-34;2!UBERON:0002173;7.05e-34;2!UBERON:0002186;7.05e-34;2!UBERON:0004821;4.09e-23;3!UBERON:0007499;4.09e-23;3!UBERON:0003215;4.09e-23;3!UBERON:0010368;4.09e-23;3!UBERON:0009911;4.09e-23;3!UBERON:0002299;4.09e-23;3!UBERON:0006524;4.09e-23;3!UBERON:0008874;4.09e-23;3!UBERON:0002169;4.09e-23;3!UBERON:0004894;4.09e-23;3!UBERON:0001052;7.35e-18;4!UBERON:0001242;7.35e-18;4!UBERON:0001262;7.35e-18;4!UBERON:0004786;7.35e-18;4!UBERON:0004808;7.35e-18;4!UBERON:0001277;7.35e-18;4!UBERON:0009856;1.03e-17;4!UBERON:0004907;1.40e-14;5!UBERON:0000485;8.16e-11;7!UBERON:0003929;8.16e-11;7!UBERON:0000490;6.23e-10;33!UBERON:0003350;1.24e-09;8!UBERON:0001155;1.04e-08;9!UBERON:0000058;6.56e-08;10!UBERON:0000059;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.39e-66,1;UBERON:0001825,2.39e-66,1;UBERON:0004903,7.05e-34,2;UBERON:0002173,7.05e-34,2;UBERON:0002186,7.05e-34,2;UBERON:0004821,4.09e-23,3;UBERON:0003215,4.09e-23,3;UBERON:0010368,4.09e-23,3;UBERON:0009911,4.09e-23,3;UBERON:0002299,4.09e-23,3;UBERON:0006524,4.09e-23,3;UBERON:0008874,4.09e-23,3;UBERON:0002169,4.09e-23,3;UBERON:0004894,4.09e-23,3;UBERON:0001052,7.35e-18,4;UBERON:0001242,7.35e-18,4;UBERON:0001262,7.35e-18,4;UBERON:0004786,7.35e-18,4;UBERON:0004808,7.35e-18,4;UBERON:0001277,7.35e-18,4;UBERON:0004907,1.40e-14,5;UBERON:0003350,1.24e-09,8;UBERON:0001155,1.04e-08,9;UBERON:0000485,1.04e-08,9;UBERON:0000059,2.32e-07,11 | |||
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|short_description=p3@ENST00000457719 | |short_description=p3@ENST00000457719 | ||
}} | }} |
Latest revision as of 20:18, 27 July 2015
Short description: | p3@ENST00000457719 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000457719_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 125bp_to_ENST00000457719_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.61e-34 | 2 |
pneumocyte | 4.09e-23 | 3 |
intestinal epithelial cell | 7.35e-18 | 4 |
epithelial cell of tracheobronchial tree | 1.21e-08 | 9 |
epithelial cell of lower respiratory tract | 1.21e-08 | 9 |
endo-epithelial cell | 2.10e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.39e-66 | 1 |
paranasal sinus | 2.39e-66 | 1 |
bronchoalveolar duct junction | 7.05e-34 | 2 |
alveolar duct | 7.05e-34 | 2 |
bronchiole | 7.05e-34 | 2 |
pulmonary alveolus epithelium | 4.09e-23 | 3 |
alveolus | 4.09e-23 | 3 |
pulmonary lobule | 4.09e-23 | 3 |
lobule | 4.09e-23 | 3 |
alveolus of lung | 4.09e-23 | 3 |
alveolar system | 4.09e-23 | 3 |
pulmonary acinus | 4.09e-23 | 3 |
alveolar sac | 4.09e-23 | 3 |
alveolar wall | 4.09e-23 | 3 |
rectum | 7.35e-18 | 4 |
intestinal mucosa | 7.35e-18 | 4 |
wall of intestine | 7.35e-18 | 4 |
gastrointestinal system mucosa | 7.35e-18 | 4 |
gastrointestinal system epithelium | 7.35e-18 | 4 |
intestinal epithelium | 7.35e-18 | 4 |
lower digestive tract | 1.40e-14 | 5 |
epithelium of mucosa | 1.24e-09 | 8 |
colon | 1.04e-08 | 9 |
simple columnar epithelium | 1.04e-08 | 9 |
large intestine | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.39e-66 | 1 |
maxillary sinus cancer | 2.39e-66 | 1 |
lung adenocarcinoma | 7.05e-34 | 2 |
respiratory system cancer | 1.51e-17 | 16 |
non-small cell lung carcinoma | 1.83e-14 | 5 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |