FFCP PHASE1:Hg19::chr12:32552842..32552853,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:32552842..32552853,+
|short_description=p13@FGD4
|description=CAGE_peak_13_at_FGD4_5end
|association_with_transcript=52bp_to_ENST00000550091_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121512 | |EntrezGene=121512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |HGNC=19125 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000550091_5end | |||
|cluster_id=chr12:32552842..32552853,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_13_at_FGD4_5end | |||
|id=chr12:32552842..32552853,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.93e-14!254;CL:0000039!5.17e-11!7;CL:0000586!5.17e-11!7;CL:0002076!8.78e-10!43;CL:0002322!1.07e-08!5;CL:0000223!1.28e-08!59;CL:0002251!3.63e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.25e-33;7!CL:0000586;3.25e-33;7!CL:0002322;3.41e-17;5!CL:0000540;6.67e-07;6!CL:0000404;6.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.02e-33,7;CL:0000586,5.02e-33,7;CL:0002322,4.76e-17,5;CL:0000540,4.95e-07,6;CL:0000031,4.95e-07,6;CL:0000404,4.95e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.37e-15;10!UBERON:0005564;2.37e-15;10!UBERON:0005754;2.50e-10;1!CL:0000031;6.67e-07;6 | |||
|ontology_enrichment_disease=DOID:305!3.33e-18!106;DOID:0050687!3.63e-14!143;DOID:1749!4.43e-07!14;DOID:299!4.57e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.66e-10;22!DOID:2994;1.66e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.89e-10,22;DOID:2994,1.89e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.36e-12!169;UBERON:0000925!6.36e-12!169;UBERON:0006595!6.36e-12!169;UBERON:0001007!9.12e-11!155;UBERON:0001555!9.12e-11!155;UBERON:0007026!9.12e-11!155;UBERON:0004921!1.79e-08!129;UBERON:0004185!1.79e-08!129;UBERON:0000473!2.53e-07!8;UBERON:0000077!4.16e-07!130;UBERON:0005911!7.33e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.59e-29;8!UBERON:0003135;3.94e-21;11!UBERON:0000991;5.15e-11;21!UBERON:0004913;1.03e-10;1!UBERON:0003703;1.03e-10;1!UBERON:0001174;1.03e-10;1!UBERON:0004914;1.03e-10;1!UBERON:0003101;1.66e-10;22!UBERON:0000079;1.66e-10;22!UBERON:0000998;2.50e-10;1!UBERON:0006868;2.50e-10;1!UBERON:0000922;5.35e-09;49!UBERON:0002108;2.88e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.77e-29,8;UBERON:0003135,3.42e-21,11;UBERON:0000991,4.79e-11,21;UBERON:0009196,4.79e-11,21;UBERON:0009117,4.79e-11,21;UBERON:0005564,4.79e-11,21;UBERON:0004913,8.95e-11,1;UBERON:0003703,8.95e-11,1;UBERON:0001174,8.95e-11,1;UBERON:0004914,8.95e-11,1;UBERON:0004176,1.55e-10,22;UBERON:0003101,1.55e-10,22;UBERON:0000079,1.55e-10,22;UBERON:0000998,1.57e-10,1;UBERON:0006868,1.57e-10,1;UBERON:0002108,2.83e-08,4 | |||
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| ||
|short_description=p13@FGD4 | |||
}} | }} |
Latest revision as of 04:59, 18 September 2015
Short description: | p13@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FGD4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 52bp_to_ENST00000550091_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.02e-33 | 7 |
germ cell | 5.02e-33 | 7 |
embryonic stem cell | 4.76e-17 | 5 |
neuron | 4.95e-07 | 6 |
neuroblast | 4.95e-07 | 6 |
electrically signaling cell | 4.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 3.77e-29 | 8 |
male reproductive organ | 3.42e-21 | 11 |
gonad | 4.79e-11 | 21 |
indifferent external genitalia | 4.79e-11 | 21 |
indifferent gonad | 4.79e-11 | 21 |
gonad primordium | 4.79e-11 | 21 |
hepatopancreatic ampulla | 8.95e-11 | 1 |
extrahepatic bile duct | 8.95e-11 | 1 |
common bile duct | 8.95e-11 | 1 |
duodenal papilla | 8.95e-11 | 1 |
external genitalia | 1.55e-10 | 22 |
male organism | 1.55e-10 | 22 |
male reproductive system | 1.55e-10 | 22 |
seminal vesicle | 1.57e-10 | 1 |
seminal fluid secreting gland | 1.57e-10 | 1 |
small intestine | 2.83e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.89e-10 | 22 |
germ cell cancer | 1.89e-10 | 22 |