FFCP PHASE1:Hg19::chr12:31478836..31478859,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:31478836..31478859,-
|short_description=p5@FAM60A
|description=CAGE_peak_5_at_FAM60A_5end
|association_with_transcript=-408bp_to_ENST00000543615_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58516 | |EntrezGene=58516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30702 | |HGNC=30702 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6U2 | |UniProt=F5H6U2 | ||
|association_with_transcript=-408bp_to_ENST00000543615_5end | |||
|cluster_id=chr12:31478836..31478859,- | |||
|description=CAGE_peak_5_at_FAM60A_5end | |||
|id=chr12:31478836..31478859,- | |||
|ontology_enrichment_celltype=CL:0000838!2.56e-17!52;CL:0000542!3.50e-17!53;CL:0000051!3.50e-17!53;CL:0000084!4.26e-14!25;CL:0000827!4.26e-14!25;CL:0000791!1.21e-11!18;CL:0000789!1.21e-11!18;CL:0002420!1.21e-11!18;CL:0002419!1.21e-11!18;CL:0000790!1.21e-11!18;CL:0000066!6.20e-08!254;CL:0000625!1.44e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.74e-21;25!CL:0000791;3.64e-18;18!CL:0000789;3.64e-18;18!CL:0002419;3.64e-18;18!CL:0000542;7.83e-13;53!CL:0000625;1.50e-11;11!CL:0000624;9.13e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.05e-24,52;CL:0000542,5.97e-24,53;CL:0000051,5.97e-24,53;CL:0000084,2.97e-21,25;CL:0000827,2.97e-21,25;CL:0000791,1.81e-18,18;CL:0000789,1.81e-18,18;CL:0002420,1.81e-18,18;CL:0002419,1.81e-18,18;CL:0000790,1.81e-18,18;CL:0000625,1.22e-11,11;CL:0002087,6.57e-09,115;CL:0000738,6.94e-09,136;CL:0000624,5.40e-08,6;CL:0002031,3.04e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.64e-18;18!CL:0000051;7.83e-13;53 | |||
|ontology_enrichment_disease=DOID:162!3.64e-17!235;DOID:14566!9.33e-17!239;DOID:305!9.79e-14!106;DOID:0050687!4.78e-13!143;DOID:0050686!1.16e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.88e-12,106;DOID:14566,5.98e-11,239;DOID:162,1.23e-10,235;DOID:0050687,7.09e-10,143;DOID:0050686,6.05e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@FAM60A | |||
}} | }} |
Latest revision as of 03:19, 18 September 2015
Short description: | p5@FAM60A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM60A_5end |
Coexpression cluster: | NA |
Association with transcript: | -408bp_to_ENST00000543615_5end |
EntrezGene: | FAM60A |
HGNC: | 30702 |
UniProt: | F5H6U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.05e-24 | 52 |
lymphocyte | 5.97e-24 | 53 |
common lymphoid progenitor | 5.97e-24 | 53 |
T cell | 2.97e-21 | 25 |
pro-T cell | 2.97e-21 | 25 |
mature alpha-beta T cell | 1.81e-18 | 18 |
alpha-beta T cell | 1.81e-18 | 18 |
immature T cell | 1.81e-18 | 18 |
mature T cell | 1.81e-18 | 18 |
immature alpha-beta T cell | 1.81e-18 | 18 |
CD8-positive, alpha-beta T cell | 1.22e-11 | 11 |
nongranular leukocyte | 6.57e-09 | 115 |
leukocyte | 6.94e-09 | 136 |
CD4-positive, alpha-beta T cell | 5.40e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 3.04e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.88e-12 | 106 |
disease of cellular proliferation | 5.98e-11 | 239 |
cancer | 1.23e-10 | 235 |
cell type cancer | 7.09e-10 | 143 |
organ system cancer | 6.05e-07 | 137 |