FFCP PHASE1:Hg19::chr3:195306394..195306429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347 | |EntrezGene=347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=612 | |HGNC=612 | ||
|TSSclassifier=strong | |||
|UniProt=P05090 | |UniProt=P05090 | ||
|association_with_transcript=-62bp_to_BT019860,BT019861,CR456838,CR541773,CU675645,DQ892668,DQ896124_5end | |association_with_transcript=-62bp_to_BT019860,BT019861,CR456838,CR541773,CU675645,DQ892668,DQ896124_5end | ||
|cluster_id=chr3:195306394..195306429,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_5_at_APOD_5end | |description=CAGE_peak_5_at_APOD_5end | ||
|id=chr3:195306394..195306429,- | |id=chr3:195306394..195306429,- | ||
|ontology_enrichment_celltype=CL:0000453!3.17e-08!5;CL:0000080!2.74e-07!6 | |ontology_enrichment_celltype=CL:0000453!3.17e-08!5;CL:0000080!2.74e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000081;2.63e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,2.63e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!3.59e-10!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.32e-28!57;UBERON:0005068!2.32e-28!57;UBERON:0006241!2.32e-28!57;UBERON:0007135!2.32e-28!57;UBERON:0007023!3.24e-28!115;UBERON:0002616!1.69e-24!59;UBERON:0002780!6.31e-24!41;UBERON:0001890!6.31e-24!41;UBERON:0006240!6.31e-24!41;UBERON:0001017!6.88e-24!82;UBERON:0003080!2.83e-23!42;UBERON:0001893!1.53e-22!34;UBERON:0005743!1.59e-22!86;UBERON:0002020!2.02e-22!34;UBERON:0003528!2.02e-22!34;UBERON:0000955!5.21e-22!69;UBERON:0006238!5.21e-22!69;UBERON:0002420!3.28e-21!9;UBERON:0007245!3.28e-21!9;UBERON:0010009!3.28e-21!9;UBERON:0010011!3.28e-21!9;UBERON:0000454!3.28e-21!9;UBERON:0002308!3.49e-21!9;UBERON:0000125!3.49e-21!9;UBERON:0001869!6.59e-21!32;UBERON:0003075!6.77e-21!86;UBERON:0007284!6.77e-21!86;UBERON:0009663!1.80e-20!7;UBERON:0002791!4.14e-20!33;UBERON:0000073!7.13e-20!94;UBERON:0001016!7.13e-20!94;UBERON:0002346!1.01e-19!90;UBERON:0000369!1.88e-16!4;UBERON:0002435!1.88e-16!4;UBERON:0000204!1.88e-16!4;UBERON:0010082!1.88e-16!4;UBERON:0003056!6.65e-15!61;UBERON:0005383!3.84e-13!3;UBERON:0005382!3.84e-13!3;UBERON:0000200!1.97e-11!6;UBERON:0001950!4.84e-11!20;UBERON:0000153!1.20e-10!129;UBERON:0007811!1.20e-10!129;UBERON:0000033!2.92e-10!123;UBERON:0002619!5.71e-10!22;UBERON:0001897!1.67e-09!2;UBERON:0001870!2.53e-09!2;UBERON:0001873!2.99e-09!2;UBERON:0010122!2.99e-09!2;UBERON:0002360!4.15e-09!2;UBERON:0000094!4.15e-09!2;UBERON:0007645!4.15e-09!2;UBERON:0000956!1.13e-08!25;UBERON:0000203!1.13e-08!25;UBERON:0004121!1.13e-08!169;UBERON:0000924!2.38e-08!173;UBERON:0006601!2.38e-08!173;UBERON:0002298!4.47e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.10e-59;10!UBERON:0000178;2.90e-40;15!UBERON:0000179;2.90e-40;15!UBERON:0000463;2.90e-40;15!UBERON:0000478;1.16e-25;24!UBERON:0002390;1.08e-19;32!UBERON:0000922;1.01e-12;49!UBERON:0002193;7.64e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.10e-59,10;UBERON:0000358,1.10e-59,10;UBERON:0000307,1.10e-59,10;UBERON:0000091,1.10e-59,10;UBERON:0000087,1.10e-59,10;UBERON:0007010,1.10e-59,10;UBERON:0007806,1.10e-59,10;UBERON:0008780,1.10e-59,10;UBERON:0005728,1.10e-59,10;UBERON:0000178,2.90e-40,15;UBERON:0000179,2.90e-40,15;UBERON:0000463,2.90e-40,15;UBERON:0000478,1.16e-25,24;UBERON:0002390,4.88e-07,98;UBERON:0003061,4.88e-07,98 | |||
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| ||
|short_description=p5@APOD | |short_description=p5@APOD | ||
}} | }} |
Latest revision as of 14:17, 17 September 2015
Short description: | p5@APOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOD_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -62bp_to_BT019860, BT019861, CR456838, CR541773, CU675645, DQ892668, DQ896124_5end |
EntrezGene: | APOD |
HGNC: | 612 |
UniProt: | P05090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.10e-59 | 10 |
blastocyst | 1.10e-59 | 10 |
blastula | 1.10e-59 | 10 |
bilaminar disc | 1.10e-59 | 10 |
inner cell mass | 1.10e-59 | 10 |
cleaving embryo | 1.10e-59 | 10 |
connecting stalk | 1.10e-59 | 10 |
inner cell mass derived epiblast | 1.10e-59 | 10 |
extraembryonic mesoderm | 1.10e-59 | 10 |
blood | 2.90e-40 | 15 |
haemolymphatic fluid | 2.90e-40 | 15 |
organism substance | 2.90e-40 | 15 |
extraembryonic structure | 1.16e-25 | 24 |
hematopoietic system | 4.88e-07 | 98 |
blood island | 4.88e-07 | 98 |