FFCP PHASE1:Hg19::chr12:19928351..19928358,+: Difference between revisions
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|id=chr12:19928351..19928358,+
|short_description=p2@ENST00000535764
|description=CAGE_peak_2_at_ENST00000535764_5end
|association_with_transcript=-26bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000535764_5end | |||
|cluster_id=chr12:19928351..19928358,+ | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_2_at_ENST00000535764_5end | |||
|id=chr12:19928351..19928358,+ | |||
|ontology_enrichment_celltype=CL:1000415!2.05e-20!2;CL:0000319!2.79e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0000319;3.10e-50;1!CL:0000159;6.30e-26;2!CL:1000415;6.30e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.42e-50,1;CL:0000159,5.56e-26,2;CL:1000415,7.14e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.32e-26;2!UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease=DOID:3030!2.79e-11!1;DOID:0060085!1.21e-10!1;DOID:3165!1.21e-10!1;DOID:0060121!1.21e-10!1;DOID:2438!1.21e-10!1;DOID:4418!1.21e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.10e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.42e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0002110!6.12e-14!3;UBERON:0006242!6.12e-14!3;UBERON:0002294!3.89e-13!7;UBERON:0001173!3.89e-13!7;UBERON:0004912!3.89e-13!7;UBERON:0001282!3.41e-11!1;UBERON:0009842!3.41e-11!1;UBERON:0003704!3.41e-11!1;UBERON:0001171!3.41e-11!1;UBERON:0001172!3.41e-11!1;UBERON:0002146!9.05e-11!1;UBERON:0005623!9.05e-11!1;UBERON:0002363!1.77e-10!1;UBERON:0007647!1.77e-10!1;UBERON:0010115!1.77e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.58e-50;1!UBERON:0009842;6.58e-50;1!UBERON:0003704;6.58e-50;1!UBERON:0001171;6.58e-50;1!UBERON:0001172;6.58e-50;1!UBERON:0002294;4.52e-29;7!UBERON:0001173;4.52e-29;7!UBERON:0002110;8.70e-18;3!UBERON:0001280;1.12e-17;3!UBERON:0004647;1.12e-17;3!UBERON:0002394;1.29e-13;4!UBERON:0003928;1.29e-13;4!UBERON:0002423;5.83e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.58e-50,1;UBERON:0009842,6.58e-50,1;UBERON:0003704,6.58e-50,1;UBERON:0001171,6.58e-50,1;UBERON:0001172,6.58e-50,1;UBERON:0002294,7.17e-23,9;UBERON:0001173,7.17e-23,9;UBERON:0004912,7.17e-23,9;UBERON:0002110,9.46e-18,3;UBERON:0006242,9.46e-18,3;UBERON:0001280,1.12e-17,3;UBERON:0004647,1.12e-17,3;UBERON:0005171,1.12e-17,3;UBERON:0002394,1.57e-09,6;UBERON:0003928,1.57e-09,6;UBERON:0009497,5.95e-09,25;UBERON:0000015,5.95e-09,25;UBERON:0002423,5.95e-09,25;UBERON:0006235,5.95e-09,25;UBERON:0004161,5.95e-09,25 | |||
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|short_description=p2@ENST00000535764 | |||
}} | }} |
Latest revision as of 07:25, 24 July 2015
Short description: | p2@ENST00000535764 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000535764_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -26bp_to_ENST00000535764_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.42e-50 | 1 |
seromucus secreting cell | 5.56e-26 | 2 |
epithelial cell of gall bladder | 7.14e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.58e-50 | 1 |
acinus | 6.58e-50 | 1 |
intrahepatic bile duct | 6.58e-50 | 1 |
portal lobule | 6.58e-50 | 1 |
hepatic acinus | 6.58e-50 | 1 |
biliary system | 7.17e-23 | 9 |
biliary tree | 7.17e-23 | 9 |
biliary bud | 7.17e-23 | 9 |
gallbladder | 9.46e-18 | 3 |
gall bladder primordium | 9.46e-18 | 3 |
liver parenchyma | 1.12e-17 | 3 |
liver lobule | 1.12e-17 | 3 |
hepatic duct | 1.12e-17 | 3 |
bile duct | 1.57e-09 | 6 |
digestive system duct | 1.57e-09 | 6 |
epithelium of foregut-midgut junction | 5.95e-09 | 25 |
anatomical boundary | 5.95e-09 | 25 |
hepatobiliary system | 5.95e-09 | 25 |
foregut-midgut junction | 5.95e-09 | 25 |
septum transversum | 5.95e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.42e-50 | 1 |