FFCP PHASE1:Hg19::chr12:15374343..15374416,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:15374343..15374416,-
|short_description=p1@RERG
|description=CAGE_peak_1_at_RERG_5end
|association_with_transcript=0bp_to_ENST00000256953,ENST00000546331,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85004 | |EntrezGene=85004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15980 | |HGNC=15980 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A58,B4DI02 | |UniProt=Q96A58,B4DI02 | ||
|association_with_transcript=0bp_to_ENST00000256953,ENST00000546331,NM_001190726,NM_032918_5end | |||
|cluster_id=chr12:15374343..15374416,- | |||
|coexpression_cluster_id=C1664 | |||
|description=CAGE_peak_1_at_RERG_5end | |||
|id=chr12:15374343..15374416,- | |||
|ontology_enrichment_celltype=CL:0000136!6.34e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.73e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.41e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.34e-09;82!UBERON:0006595;2.69e-07;86!UBERON:0008947;3.90e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.86e-46!115;UBERON:0001049!4.30e-23!57;UBERON:0005068!4.30e-23!57;UBERON:0006241!4.30e-23!57;UBERON:0007135!4.30e-23!57;UBERON:0002616!1.74e-21!59;UBERON:0000955!3.90e-20!69;UBERON:0006238!3.90e-20!69;UBERON:0001017!7.10e-20!82;UBERON:0005743!7.11e-20!86;UBERON:0003075!3.75e-19!86;UBERON:0007284!3.75e-19!86;UBERON:0000481!2.49e-18!347;UBERON:0000073!2.77e-18!94;UBERON:0001016!2.77e-18!94;UBERON:0002346!2.81e-18!90;UBERON:0003080!1.07e-17!42;UBERON:0002780!5.71e-17!41;UBERON:0001890!5.71e-17!41;UBERON:0006240!5.71e-17!41;UBERON:0000475!2.73e-15!365;UBERON:0002020!1.14e-14!34;UBERON:0003528!1.14e-14!34;UBERON:0000064!1.42e-14!219;UBERON:0001893!1.70e-14!34;UBERON:0000153!3.91e-14!129;UBERON:0007811!3.91e-14!129;UBERON:0001869!4.66e-14!32;UBERON:0000477!5.63e-14!286;UBERON:0002791!5.69e-14!33;UBERON:0000033!1.16e-13!123;UBERON:0000062!1.63e-13!511;UBERON:0003056!5.67e-13!61;UBERON:0002619!1.13e-11!22;UBERON:0000468!1.99e-11!659;UBERON:0004121!6.35e-11!169;UBERON:0001950!9.20e-11!20;UBERON:0000924!1.18e-10!173;UBERON:0006601!1.18e-10!173;UBERON:0009569!1.28e-10!113;UBERON:0004111!7.90e-10!241;UBERON:0000466!8.25e-10!126;UBERON:0000956!8.71e-10!25;UBERON:0000203!8.71e-10!25;UBERON:0000922!1.16e-09!612;UBERON:0000025!1.23e-09!194;UBERON:0000464!3.02e-09!104;UBERON:0000063!5.81e-09!97;UBERON:0002050!7.21e-09!605;UBERON:0005423!7.21e-09!605;UBERON:0000923!1.59e-08!604;UBERON:0005291!1.59e-08!604;UBERON:0006598!1.59e-08!604;UBERON:0002532!1.59e-08!604;UBERON:0004921!1.63e-08!129;UBERON:0004185!1.63e-08!129;UBERON:0002553!5.18e-08!70;UBERON:0000483!9.15e-08!309;UBERON:0000119!9.71e-08!312;UBERON:0001007!1.06e-07!155;UBERON:0001555!1.06e-07!155;UBERON:0007026!1.06e-07!155;UBERON:0000467!1.44e-07!625;UBERON:0000480!1.94e-07!626;UBERON:0002417!5.01e-07!61;UBERON:0000916!5.01e-07!61;UBERON:0005177!5.57e-07!107;UBERON:0001041!6.12e-07!98;UBERON:0001443!6.34e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.47e-16;32!UBERON:0003528;1.89e-16;34!UBERON:0002020;1.89e-16;34!UBERON:0001893;2.54e-16;34!UBERON:0002791;2.84e-16;32!UBERON:0007023;5.47e-16;114!UBERON:0002780;1.02e-15;41!UBERON:0001890;1.02e-15;41!UBERON:0002619;3.02e-15;22!UBERON:0001950;5.43e-14;20!UBERON:0000073;1.26e-13;53!UBERON:0002616;1.26e-13;53!UBERON:0000956;1.34e-12;25!UBERON:0000203;1.34e-12;25!UBERON:0000955;1.01e-10;68!UBERON:0001017;3.43e-10;75!UBERON:0000125;1.77e-08;9!UBERON:0002308;1.77e-08;9!UBERON:0002420;6.39e-08;9!UBERON:0007245;6.39e-08;9!UBERON:0010009;6.39e-08;9!UBERON:0010011;6.39e-08;9!UBERON:0000454;6.39e-08;9!UBERON:0001016;6.67e-08;83!UBERON:0001443;1.12e-07;11!UBERON:0001737;1.31e-07;9!UBERON:0001557;1.31e-07;9!UBERON:0009663;3.66e-07;7!UBERON:0004921;9.12e-07;33!UBERON:0000310;9.39e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.31e-61,114;UBERON:0001049,3.64e-26,56;UBERON:0005068,3.64e-26,56;UBERON:0006241,3.64e-26,56;UBERON:0007135,3.64e-26,56;UBERON:0011216,8.47e-26,223;UBERON:0000073,2.21e-24,53;UBERON:0002616,2.21e-24,53;UBERON:0000955,7.53e-22,68;UBERON:0006238,7.53e-22,68;UBERON:0002780,2.34e-21,41;UBERON:0001890,2.34e-21,41;UBERON:0003080,2.34e-21,41;UBERON:0006240,2.34e-21,41;UBERON:0001017,3.36e-20,81;UBERON:0003528,3.43e-19,34;UBERON:0002020,3.43e-19,34;UBERON:0001893,5.88e-19,34;UBERON:0003075,1.90e-18,82;UBERON:0007284,1.90e-18,82;UBERON:0001869,2.30e-18,32;UBERON:0002791,7.29e-18,32;UBERON:0001016,4.71e-17,89;UBERON:0002346,9.14e-17,86;UBERON:0002619,3.08e-15,22;UBERON:0010371,3.73e-14,104;UBERON:0001950,5.24e-14,20;UBERON:0003056,7.02e-13,61;UBERON:0000956,1.36e-12,25;UBERON:0000203,1.36e-12,25;UBERON:0010314,9.97e-12,132;UBERON:0004921,3.84e-10,118;UBERON:0004121,6.26e-09,171;UBERON:0000924,6.26e-09,171;UBERON:0006601,6.26e-09,171;UBERON:0004111,7.23e-09,240;UBERON:0000025,9.93e-09,192;UBERON:0000125,2.17e-08,9;UBERON:0002308,2.17e-08,9;UBERON:0009569,3.87e-08,112;UBERON:0000922,6.62e-08,592;UBERON:0002420,7.28e-08,9;UBERON:0007245,7.28e-08,9;UBERON:0010009,7.28e-08,9;UBERON:0010011,7.28e-08,9;UBERON:0000454,7.28e-08,9;UBERON:0005423,8.39e-08,581;UBERON:0001041,9.34e-08,87;UBERON:0001443,9.41e-08,11;UBERON:0001737,1.48e-07,9;UBERON:0001007,1.63e-07,145;UBERON:0001555,1.63e-07,145;UBERON:0007026,1.63e-07,145;UBERON:0009663,4.39e-07,7;UBERON:0000310,7.91e-07,10 | |||
|phase1_expression=17.2594460307029,10.9191267184401,63.711390651379,63.0461779624722,77.7712304303481,48.8509573496206,17.7309914717817,0.631719873426831,0,0.491467873003018,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.612002073732759,0.626909442956176,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,5.06014813338393,8.02140657017423,5.79386075843295,0.795285947051099,5.83961844363163,0,0,0.087834785693126,33.3996642519167,0,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.206651562351531,0,0.247266929278557,1.82032272387605,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,2.25357088359895,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,1.51052125730374,0.829288440122964,0.252320850875628,0,0,3.21620469096443,0,0,0,9.46454400318751,9.10357326421749,7.95336398615491,10.367633436845,10.0224544282507,13.0498840511103,10.1123481120123,11.1846235121447,14.2356448070164,0,0,1.2347220339942,7.3504355692771,0,0,6.49868897349544,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0.234817388471643,0,0,0,24.4963363367375,25.7545848628462,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,2.14466990487221,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,10.4242540800657,0.821905290201534,1.79060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.34960640891054,0.500170521059677,1.08506009479894,0,0,0,0,5.41702979509894,0,2.0694614258501,0,0.184369168541703,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0.30239029332968,1.24053903909388,0.61384789315225,1.96462066103151,6.15067916427365,8.18731598506726,5.79074116116987,16.325987308949,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0,0.902399225814824,0.539107359730903,3.13739907670742,0,0.211103257785751,0,0,0.431831832204279,0,8.67028600140329,6.52196706011309,1.27438136522519,7.47968408035852,0.671624264166535,0,0,0,0.328014645699706,0.325378394664303,13.4983725258516,0.0915694648183434,0.165018999841176,0,0,3.21367859688319,0,0,0.307007349452259,0.689182862422653,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,1.58189712359363,1.90630193923825,0.767693373934002,0.42793898803392,0,0,2.51821440616641,0.274537029736055,0.117812402345686,0,0,0,1.46290121726877,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,0.422215270595328,0.658589785919804,0,0.349934720244983,0.0962221127255121,0,0,14.0274263157401,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,5.2480451118497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.1040131653004,0,0,0,0,0,0,3.97659059106519,4.92342957436795,2.78271762557265,0,0,83.2856590889471,25.1418363133344,1.0077309914171,0,0,0,0,2.14825409610731,0,38.9641452265888,0,0,12.6013256992378,7.0503754603007,1.99613798001194,25.5219205863529,8.92091999961196,60.8999643365227,0.455173793141999,2.2882828526349,0,0.344743373241465,0.291604613383254,1.73624994933292,79.7167247232455,39.91742118501,1.52581736317083,1.43753037910592,2.06883333267483,9.87234287192876,0,0.278847488557207,83.7218812521312,3.98797195464504,0,0,0,0.31900115973192,0.274792780205587,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,2.59666367690509,20.9005005526486,27.1564723025251,14.0536933334734,0,0,0,2.49384192028505,32.1031058919516,30.4543779442941,0,2.34797542718508,0,61.1605824416555,10.8891644443797,1.22429104652196,1.20054501294127,5.56196651833622,1.14057010536972,0,0,0.627865836814451,0,0.853828638089378,0.138674673013139,0,0,0.0870592065804026,107.631627637091,0,0,0.0730893170861856,0,13.3844842754019,0,14.9147288915151,0,0,13.4851995386022,0.195551382734803,0.160317640503067,17.5031455686269,0,18.1553925614174,0,0.171594997861965,0.14405479798815,0,0.471388069233591,0,0,0,0,27.6193332806503,4.92859364011175,0,4.29765441419957,0,30.721064139948,31.853298937624,19.382571663574,1.79711100449092,8.15529491459485,10.0427155848843,7.65891586348679,0.360299883542404,0,0,0,0,20.4729161550677,0,11.1332156573302,7.21878052391351,0.160753148465019,0.550157746388935,0.83088067605837,0,1.5476039091159,13.1826537947914,0,47.4410357941173,27.433749594604,0.105600336519406,0,0,14.2939065274673,3.31045985182716,0.25426853765475,0,0,0,0,0,0,0,2.05173127149315,6.62534444561107,17.065350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| ||
|short_description=p1@RERG | |||
}} | }} |
Latest revision as of 14:48, 17 September 2015
Short description: | p1@RERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RERG_5end |
Coexpression cluster: | C1664_uterus_epididymis_aorta_cervix_caudate_Adipocyte_ductus |
Association with transcript: | 0bp_to_ENST00000256953, ENST00000546331, NM_001190726, NM_032918_5end |
EntrezGene: | RERG |
HGNC: | 15980 |
UniProt: | Q96A58B4DI02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.41e-07 | 15 |