FFCP PHASE1:Hg19::chr3:112359295..112359306,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt=Q76M96 | |UniProt=Q76M96 | ||
|association_with_transcript=-17bp_to_BX647817_5end | |association_with_transcript=-17bp_to_BX647817_5end | ||
|cluster_id=chr3:112359295..112359306,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_19_at_CCDC80_5end | |description=CAGE_peak_19_at_CCDC80_5end | ||
|id=chr3:112359295..112359306,- | |id=chr3:112359295..112359306,- | ||
|ontology_enrichment_celltype=CL:0000055!1.62e-36!180;CL:0000057!2.23e-24!75;CL:0000680!3.23e-14!57;CL:0000056!3.23e-14!57;CL:0000355!3.23e-14!57;CL:0000187!8.18e-13!54;CL:0002620!1.95e-11!23;CL:0000183!6.45e-11!59;CL:0000192!1.02e-10!42;CL:0000514!1.02e-10!42;CL:0000393!5.47e-10!60;CL:0000211!5.47e-10!60;CL:0002334!2.11e-08!12;CL:0000359!1.35e-07!32;CL:0000048!1.58e-07!430;CL:0000723!8.08e-07!436 | |ontology_enrichment_celltype=CL:0000055!1.62e-36!180;CL:0000057!2.23e-24!75;CL:0000680!3.23e-14!57;CL:0000056!3.23e-14!57;CL:0000355!3.23e-14!57;CL:0000187!8.18e-13!54;CL:0002620!1.95e-11!23;CL:0000183!6.45e-11!59;CL:0000192!1.02e-10!42;CL:0000514!1.02e-10!42;CL:0000393!5.47e-10!60;CL:0000211!5.47e-10!60;CL:0002334!2.11e-08!12;CL:0000359!1.35e-07!32;CL:0000048!1.58e-07!430;CL:0000723!8.08e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.21e-11;23!CL:0002334;5.52e-10;12!CL:0000057;2.12e-08;73!CL:1000306;4.25e-07;4!CL:0002547;4.25e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.92e-23,76;CL:0000048,3.39e-13,427;CL:0000723,1.37e-12,433;CL:0000034,8.25e-12,441;CL:0002620,2.08e-11,23;CL:0002334,4.04e-10,12;CL:0000680,4.89e-10,58;CL:0000056,4.89e-10,58;CL:0000355,4.89e-10,58;CL:0000192,2.11e-08,43;CL:0000514,2.11e-08,43;CL:0000187,2.48e-08,55;CL:0002320,1.27e-07,361;CL:1000306,4.53e-07,4;CL:0002547,4.53e-07,4;CL:0000393,7.20e-07,61;CL:0000211,7.20e-07,61;CL:0000359,8.62e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.55e-08;5!DOID:450;6.55e-08;5!DOID:66;6.55e-08;5!DOID:423;6.55e-08;5!DOID:0080000;6.55e-08;5!DOID:11722;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.02e-08,5;DOID:450,4.02e-08,5;DOID:66,4.02e-08,5;DOID:423,4.02e-08,5;DOID:0080000,4.02e-08,5;DOID:11722,4.02e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.45e-14!83;UBERON:0002329!4.45e-14!83;UBERON:0003077!4.45e-14!83;UBERON:0003059!4.45e-14!83;UBERON:0007282!4.45e-14!83;UBERON:0009618!4.45e-14!83;UBERON:0007285!4.45e-14!83;UBERON:0002385!5.93e-14!63;UBERON:0001015!5.93e-14!63;UBERON:0000383!5.93e-14!63;UBERON:0001134!1.03e-13!61;UBERON:0002036!1.03e-13!61;UBERON:0003082!1.03e-13!61;UBERON:0004290!2.99e-13!70;UBERON:0000486!7.74e-11!82;UBERON:0000475!8.52e-09!365;UBERON:0004872!5.36e-08!84;UBERON:0001013!4.88e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.58e-10;9!UBERON:0000042;6.58e-10;9!UBERON:0003688;1.09e-09;6!UBERON:0002358;1.09e-09;6!UBERON:0003684;1.09e-09;6!UBERON:0001178;1.09e-09;6!UBERON:0004797;4.25e-07;4!UBERON:0000415;4.25e-07;4!UBERON:0007240;4.25e-07;4!UBERON:0005742;4.25e-07;4!UBERON:0005734;4.25e-07;4!UBERON:0004664;4.25e-07;4!UBERON:0004663;4.25e-07;4!UBERON:0001013;7.44e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.46e-09,6;UBERON:0002358,1.46e-09,6;UBERON:0003684,1.46e-09,6;UBERON:0001178,1.46e-09,6;UBERON:0001134,6.85e-09,62;UBERON:0002036,6.85e-09,62;UBERON:0003082,6.85e-09,62;UBERON:0002385,2.23e-08,64;UBERON:0001015,2.23e-08,64;UBERON:0000383,2.23e-08,64;UBERON:0002384,3.96e-08,371;UBERON:0002199,6.05e-08,46;UBERON:0002416,6.05e-08,46;UBERON:0004872,1.88e-07,83;UBERON:0007524,3.86e-07,73;UBERON:0000415,4.53e-07,4;UBERON:0007240,4.53e-07,4;UBERON:0005742,4.53e-07,4;UBERON:0005734,4.53e-07,4;UBERON:0004664,4.53e-07,4;UBERON:0004663,4.53e-07,4;UBERON:0002097,5.09e-07,41;UBERON:0004457,6.90e-07,12;UBERON:0000042,6.90e-07,12;UBERON:0002329,7.67e-07,71;UBERON:0003059,7.67e-07,71;UBERON:0007282,7.67e-07,71;UBERON:0004290,7.67e-07,71;UBERON:0009618,7.67e-07,71;UBERON:0001013,8.95e-07,14 | |||
|phase1_expression=3.08853244759946,2.5692062866918,4.79244973926302,7.00513088471913,9.38618298297304,3.48935409640147,0,0.631719873426831,1.04474251279935,0.245733936501509,0,1.96597234917155,1.31883489114227,1.8564952944007,0.994192127183747,0,0,0,0.975865597581014,2.83178433576612,1.63200552995402,1.88072832886853,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,2.30152611318355,0.722878304769133,1.50401373190767,1.15877215168659,0,1.94653948121054,0.283604451492204,0.886917589850256,0.614843499851882,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45457927542978,8.86413581652058,4.8991396900891,24.667949384398,3.19201543978521,3.36406560085384,1.06748995729705,2.22000793575444,3.11211035399766,0.134710672069688,0.490385709340376,2.11900398702904,1.15235184896,0.70296429550139,0.312160076830321,0,0.448346041655403,0.469737994575059,0.323745888736263,0.280901613404497,0,0.122834317311768,0.413303124703062,3.56400857184616,0.741800787835671,0,0.718618141816238,0,0.250237039743928,0.277064115484183,1.75591048352335,0.919463387397059,0.600952235626387,1.36118619792025,5.91985797773244,5.12537733164562,2.96704661623387,11.1033705551229,2.98852334791473,5.15281080091258,3.90845398296339,10.126579934476,3.89748020644795,3.78650661366172,3.40584624976508,2.90962902273861,7.81021103536552,2.41805035746337,1.18692414617341,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0.134831308160164,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,1.03993478527958,2.88662684050547,0.231860809950154,1.87853910777315,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,3.4214489204541,0,0,0.285826432630578,1.23344192779897,3.48768055066624,1.24675085895615,2.19761916788222,3.57656445851882,0.845302752556,0.531876233169741,0,2.05765899409714,0,0.266422179016099,0.57191197463259,3.7983512377401,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0.599837947092342,0,0,0,1.67737398844108,2.29723871668228,0,3.04040744001916,1.2328579353023,1.43248770591916,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,1.34960640891054,2.00068208423871,1.89885516589815,1.45579603071565,1.42743191037729,1.10391690523754,1.52283839490527,2.40756879782175,0,1.03473071292505,3.98535359121262,2.02806085395873,0.60818530127658,0.195801157462741,0,0,0,0,0.303127571446259,4.99306318531491,2.72151263996712,3.72161711728165,3.37616341233737,6.73584226639377,7.56020980608636,2.04682899626681,6.4341568457443,2.96836132889982,1.23367755042124,1.77561725313127,1.64254312027618,0.519254429183621,0.697262270759755,0,0.200506470303285,0,1.49258782613989,0.728364672026868,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0.732555718546747,0.577566499444116,0,0,3.21367859688319,0.290012154876366,0.616194468458578,0.921022048356777,0.275673144969061,0.751941714077915,1.0151168573996,0.596586391912706,1.78064071293475,0,0,0,0,0.464845549297286,17.9443037693465,2.0911118104818,0.924100740528266,4.7907542728532,1.73986598415015,0.37064843820784,1.14499909393593,1.48863347743867,1.2655176988749,1.14378116354295,0.511795582622668,0.42793898803392,1.59101623962968,0.78494864019923,1.43897966066652,1.92175920815238,0.353437207037059,1.41527737101321,0,0,1.46290121726877,0.974853958525138,1.05650146756755,1.22849920267187,1.1312434556297,2.26016233240486,0,1.99031692572366,0,0.578775534266688,1.31178950409327,1.82619339266434,0.6196469961995,0.563391205064483,2.15117028306077,1.76848273823618,2.85336841185,0.354761064070598,2.9555068941673,1.31717957183961,0.379473173765715,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,2.07875276582847,0.307160702099232,0,0,2.00355669041231,0,0,0.796991953004279,0,0,0,0,4.3545542272653,0,0,0,0.0986434056369336,0,5.55684950723184,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0.884634079449797,0.295547618953547,0,0,0.139423744278603,1.23120413606075,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.865554558968364,0,0,0,0,0,0,0.404406797884062,0.802577647298789,1.1713222286267,0,0,0,0,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.698906672968121,0.859930162358083,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0.400794101257669,1.49417096317547,0.39961921916426,0,0.114536596165916,0,0,0.621262677827163,0,0.135904206073614,0.209205692624666,1.12198039399954,0.577901179803038,0.600420288709789,0.136905378891993,0,0.429765441419957,0,2.79282401272254,0.687481272035051,0,0.199679000498991,0.429226048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| ||
|short_description=p19@CCDC80 | |short_description=p19@CCDC80 | ||
}} | }} |
Latest revision as of 14:27, 19 September 2015
Short description: | p19@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | -17bp_to_BX647817_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | Q76M96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.92e-23 | 76 |
multi fate stem cell | 3.39e-13 | 427 |
somatic stem cell | 1.37e-12 | 433 |
stem cell | 8.25e-12 | 441 |
skin fibroblast | 2.08e-11 | 23 |
preadipocyte | 4.04e-10 | 12 |
muscle precursor cell | 4.89e-10 | 58 |
myoblast | 4.89e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.89e-10 | 58 |
smooth muscle cell | 2.11e-08 | 43 |
smooth muscle myoblast | 2.11e-08 | 43 |
muscle cell | 2.48e-08 | 55 |
connective tissue cell | 1.27e-07 | 361 |
fibroblast of tunica adventitia of artery | 4.53e-07 | 4 |
fibroblast of the aortic adventitia | 4.53e-07 | 4 |
electrically responsive cell | 7.20e-07 | 61 |
electrically active cell | 7.20e-07 | 61 |
vascular associated smooth muscle cell | 8.62e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.46e-09 | 6 |
peritoneum | 1.46e-09 | 6 |
abdominal cavity | 1.46e-09 | 6 |
visceral peritoneum | 1.46e-09 | 6 |
skeletal muscle tissue | 6.85e-09 | 62 |
striated muscle tissue | 6.85e-09 | 62 |
myotome | 6.85e-09 | 62 |
muscle tissue | 2.23e-08 | 64 |
musculature | 2.23e-08 | 64 |
musculature of body | 2.23e-08 | 64 |
connective tissue | 3.96e-08 | 371 |
integument | 6.05e-08 | 46 |
integumental system | 6.05e-08 | 46 |
splanchnic layer of lateral plate mesoderm | 1.88e-07 | 83 |
dense mesenchyme tissue | 3.86e-07 | 73 |
artery wall | 4.53e-07 | 4 |
tunica adventitia of artery | 4.53e-07 | 4 |
adventitia | 4.53e-07 | 4 |
tunica adventitia of blood vessel | 4.53e-07 | 4 |
aorta tunica adventitia | 4.53e-07 | 4 |
aorta wall | 4.53e-07 | 4 |
skin of body | 5.09e-07 | 41 |
cavity lining | 6.90e-07 | 12 |
serous membrane | 6.90e-07 | 12 |
somite | 7.67e-07 | 71 |
presomitic mesoderm | 7.67e-07 | 71 |
presumptive segmental plate | 7.67e-07 | 71 |
dermomyotome | 7.67e-07 | 71 |
trunk paraxial mesoderm | 7.67e-07 | 71 |
adipose tissue | 8.95e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.02e-08 | 5 |
myotonic disease | 4.02e-08 | 5 |
muscle tissue disease | 4.02e-08 | 5 |
myopathy | 4.02e-08 | 5 |
muscular disease | 4.02e-08 | 5 |
myotonic dystrophy | 4.02e-08 | 5 |