FFCP PHASE1:Hg19::chr3:112358055..112358066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=444bp_to_BC023639,BC042128_5end | |association_with_transcript=444bp_to_BC023639,BC042128_5end | ||
|cluster_id=chr3:112358055..112358066,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_24_at_CCDC80_5end | |description=CAGE_peak_24_at_CCDC80_5end | ||
|id=chr3:112358055..112358066,- | |id=chr3:112358055..112358066,- | ||
|ontology_enrichment_celltype=CL:0000055!2.26e-18!180;CL:0000057!7.30e-16!75;CL:0002620!2.70e-10!23;CL:0002334!1.69e-09!12;CL:0000680!5.90e-09!57;CL:0000056!5.90e-09!57;CL:0000355!5.90e-09!57;CL:0000187!9.38e-08!54;CL:0000077!1.11e-07!19 | |ontology_enrichment_celltype=CL:0000055!2.26e-18!180;CL:0000057!7.30e-16!75;CL:0002620!2.70e-10!23;CL:0002334!1.69e-09!12;CL:0000680!5.90e-09!57;CL:0000056!5.90e-09!57;CL:0000355!5.90e-09!57;CL:0000187!9.38e-08!54;CL:0000077!1.11e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.20e-16;23!CL:0002334;7.92e-12;12!CL:1000306;3.02e-09;4!CL:0002547;3.02e-09;4!CL:0002570;5.61e-08;8!CL:0000737;1.53e-07;4!CL:0000135;1.66e-07;3!CL:0000388;1.66e-07;3!CL:0002579;2.69e-07;3!CL:0000057;2.79e-07;73!CL:0002615;3.66e-07;3!CL:0000136;8.60e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.46e-22,76;CL:0002620,5.81e-16,23;CL:0002334,3.64e-12,12;CL:0000048,9.38e-11,427;CL:0000723,2.52e-10,433;CL:0000034,8.98e-10,441;CL:1000306,3.08e-09,4;CL:0002547,3.08e-09,4;CL:0000136,3.52e-09,15;CL:0002320,4.14e-09,361;CL:0000134,1.23e-08,354;CL:0002570,5.97e-08,8;CL:0000737,1.50e-07,4;CL:0000135,1.69e-07,3;CL:0000388,1.69e-07,3;CL:0002579,2.71e-07,3;CL:0002615,4.98e-07,3;CL:0002580,8.67e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.51e-10;5!DOID:450;2.51e-10;5!DOID:66;2.51e-10;5!DOID:423;2.51e-10;5!DOID:0080000;2.51e-10;5!DOID:11722;2.51e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.77e-10,5;DOID:450,1.77e-10,5;DOID:66,1.77e-10,5;DOID:423,1.77e-10,5;DOID:0080000,1.77e-10,5;DOID:11722,1.77e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0004923!1.33e-10!57;UBERON:0004290!2.72e-09!70;UBERON:0000914!4.58e-09!83;UBERON:0002329!4.58e-09!83;UBERON:0003077!4.58e-09!83;UBERON:0003059!4.58e-09!83;UBERON:0007282!4.58e-09!83;UBERON:0009618!4.58e-09!83;UBERON:0007285!4.58e-09!83;UBERON:0002385!7.65e-09!63;UBERON:0001015!7.65e-09!63;UBERON:0000383!7.65e-09!63;UBERON:0002199!1.88e-08!45;UBERON:0002416!1.88e-08!45;UBERON:0001134!2.59e-08!61;UBERON:0002036!2.59e-08!61;UBERON:0003082!2.59e-08!61;UBERON:0000486!2.72e-08!82;UBERON:0002097!5.41e-08!40;UBERON:0004872!8.78e-08!84;UBERON:0005256!7.32e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.16e-14;9!UBERON:0000042;6.16e-14;9!UBERON:0003688;8.35e-13;6!UBERON:0002358;8.35e-13;6!UBERON:0003684;8.35e-13;6!UBERON:0001178;8.35e-13;6!UBERON:0002097;2.43e-10;41!UBERON:0002199;6.53e-10;46!UBERON:0002416;6.53e-10;46!UBERON:0001013;1.98e-09;14!UBERON:0004797;3.02e-09;4!UBERON:0000415;3.02e-09;4!UBERON:0007240;3.02e-09;4!UBERON:0005742;3.02e-09;4!UBERON:0005734;3.02e-09;4!UBERON:0004664;3.02e-09;4!UBERON:0004663;3.02e-09;4!UBERON:0007846;1.66e-07;3!UBERON:0000043;1.66e-07;3!UBERON:0007845;1.66e-07;3!UBERON:0003102;2.66e-07;50!UBERON:0002384;6.09e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.43e-14,46;UBERON:0002416,1.43e-14,46;UBERON:0002097,6.94e-14,41;UBERON:0003688,1.14e-12,6;UBERON:0002358,1.14e-12,6;UBERON:0003684,1.14e-12,6;UBERON:0001178,1.14e-12,6;UBERON:0004457,5.86e-10,12;UBERON:0000042,5.86e-10,12;UBERON:0002384,6.01e-10,371;UBERON:0001013,1.58e-09,14;UBERON:0000415,3.08e-09,4;UBERON:0007240,3.08e-09,4;UBERON:0005742,3.08e-09,4;UBERON:0005734,3.08e-09,4;UBERON:0004664,3.08e-09,4;UBERON:0004663,3.08e-09,4;UBERON:0004797,9.85e-08,7;UBERON:0003102,1.21e-07,99;UBERON:0007846,1.69e-07,3;UBERON:0000043,1.69e-07,3;UBERON:0007845,1.69e-07,3 | |||
|phase1_expression=1.63510541343501,14.3447351006959,7.04772020479856,2.00146596706261,4.46961094427288,4.36169262050184,0,0,1.82829939739887,0,0,1.31064823278103,0.791300934685361,0.495065411840187,1.32558950291166,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,1.79007586580942,0,1.50401373190767,2.89693037921647,0,0.486634870302636,0,0,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,3.92554586160197,3.17782033951725,11.1866282092037,5.67469411517371,2.24271040056923,0,0.24666754841716,1.24484414159907,0,0,0.454072282934794,0,0,0,0,0.597794722207204,0.469737994575059,0.485618833104395,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0.612975591598039,0.300476117813194,0.340296549480063,3.94657198515496,2.77624605464138,3.81477422087211,3.90118424909723,2.57631323096097,1.8034837803194,3.16398655763703,4.55696097051419,2.14361411354637,4.29137416214995,2.94559675655358,1.93975268182574,10.2952781829818,1.81353776809752,1.18692414617341,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,1.92972281457866,0,2.78620756819187,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0.301586917234893,0,0,0,0,0,0.587043471179108,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0.560655421726804,0,0.51336800074665,0.517086863031111,10.7296933755565,0,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,1.06617584622764,0,0.301439377059586,1.74306691720059,0.599837947092342,0,0,0,0.239624855491583,0,1.42636905040718,2.02693829334611,1.64381058040307,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,0.500170521059677,0.542530047399471,0.623912584592421,2.85486382075459,0.473107245101804,0.702848489956279,0.601892199455438,0,1.03473071292505,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0.606255142892519,6.65741758041988,1.5119514666484,2.72918588600655,1.99500565274481,6.73584226639377,9.09787959715477,2.55853624533352,10.9380666377653,2.96836132889982,1.85051632563187,0.355123450626254,0.492762936082855,1.55776328755086,0.581051892299796,0,0.200506470303285,0.276242966807689,1.7222167224691,2.36718518408732,2.75361271414791,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.366277859273374,0,0,0,3.21367859688319,0.096670718292122,0,0,0.413509717453592,0.751941714077915,1.30515024522806,0.170453254832202,0.267096106940212,0,0,0,0.2023155617111,1.39453664789186,11.333244485903,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.55597265731176,0,0,0,0.762520775695299,0,0.42793898803392,0.318203247925937,0,0.899362287916574,0.54907405947211,0.706874414074119,0,0,0,0.48763373908959,0.974853958525138,0,0.272999822815972,2.82810863907426,2.26016233240486,0,0.66343897524122,1.31535265576129,0,0,0.202910376962704,1.54911749049875,0,0.143411352204052,0.392996164052485,1.07001315444375,0,1.68886108238131,3.29294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.71623345421307,0.890894042497916,0.614321404198464,0,0,0.111308705022906,0,0,0.796991953004279,0,0,0,0,3.73247505194169,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0.278847488557207,0.615602068030377,0.113942055847001,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.522355239482415,2.62090002363045,0.343972064943233,0,0,0,0.387956065953678,0,0.677942222341597,0,0,0.0633107959558787,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0.49701014226173,0,0.135904206073614,0,0.305994652908965,0,0,0,0,0.429765441419957,0,3.90995361781156,0.687481272035051,0,0.399358000997982,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0.335434687599266,0,0,0,0,0,0.714695326373367,0.662091970365432,0,2.17199840701485,0,3.26587360109409,0,0,1.5334921960688,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,1.94031243752936,2.33713309847224,1.10961172300523,1.89403005275089,2.0125432140206,2.66943366478961,1.60188047877847,3.32708032279126,0.15543720058278,0.73927574994817,0.318593534327405,0.449803112163605,0.155262956876259,3.7323558705677,0.5316834291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| ||
|short_description=p24@CCDC80 | |short_description=p24@CCDC80 | ||
}} | }} |
Latest revision as of 14:19, 19 September 2015
Short description: | p24@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 444bp_to_BC023639, BC042128_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.46e-22 | 76 |
skin fibroblast | 5.81e-16 | 23 |
preadipocyte | 3.64e-12 | 12 |
multi fate stem cell | 9.38e-11 | 427 |
somatic stem cell | 2.52e-10 | 433 |
stem cell | 8.98e-10 | 441 |
fibroblast of tunica adventitia of artery | 3.08e-09 | 4 |
fibroblast of the aortic adventitia | 3.08e-09 | 4 |
fat cell | 3.52e-09 | 15 |
connective tissue cell | 4.14e-09 | 361 |
mesenchymal cell | 1.23e-08 | 354 |
mesenchymal stem cell of adipose | 5.97e-08 | 8 |
striated muscle cell | 1.50e-07 | 4 |
fibrocyte | 1.69e-07 | 3 |
tendon cell | 1.69e-07 | 3 |
omentum preadipocyte | 2.71e-07 | 3 |
adipocyte of omentum tissue | 4.98e-07 | 3 |
preadipocyte of the breast | 8.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 1.43e-14 | 46 |
integumental system | 1.43e-14 | 46 |
skin of body | 6.94e-14 | 41 |
omentum | 1.14e-12 | 6 |
peritoneum | 1.14e-12 | 6 |
abdominal cavity | 1.14e-12 | 6 |
visceral peritoneum | 1.14e-12 | 6 |
cavity lining | 5.86e-10 | 12 |
serous membrane | 5.86e-10 | 12 |
connective tissue | 6.01e-10 | 371 |
adipose tissue | 1.58e-09 | 14 |
artery wall | 3.08e-09 | 4 |
tunica adventitia of artery | 3.08e-09 | 4 |
adventitia | 3.08e-09 | 4 |
tunica adventitia of blood vessel | 3.08e-09 | 4 |
aorta tunica adventitia | 3.08e-09 | 4 |
aorta wall | 3.08e-09 | 4 |
blood vessel layer | 9.85e-08 | 7 |
surface structure | 1.21e-07 | 99 |
dense regular connective tissue | 1.69e-07 | 3 |
tendon | 1.69e-07 | 3 |
regular connective tissue | 1.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.77e-10 | 5 |
myotonic disease | 1.77e-10 | 5 |
muscle tissue disease | 1.77e-10 | 5 |
myopathy | 1.77e-10 | 5 |
muscular disease | 1.77e-10 | 5 |
myotonic dystrophy | 1.77e-10 | 5 |