FFCP PHASE1:Hg19::chr19:39402846..39402860,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643669 | |EntrezGene=643669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_NM_001243212_5end | |association_with_transcript=-48bp_to_NM_001243212_5end | ||
|cluster_id=chr19:39402846..39402860,- | |||
|coexpression_cluster_id=C347 | |||
|description=CAGE_peak_2_at_LOC643669_5end | |description=CAGE_peak_2_at_LOC643669_5end | ||
|id=chr19:39402846..39402860,- | |id=chr19:39402846..39402860,- | ||
|ontology_enrichment_celltype=CL:0000047!2.19e-11!8;CL:0000540!2.92e-10!6;CL:0000031!2.92e-10!6;CL:0000404!2.92e-10!6;CL:0000133!1.40e-09!59;CL:0000242!8.57e-09!2;CL:0000221!1.86e-07!71 | |ontology_enrichment_celltype=CL:0000047!2.19e-11!8;CL:0000540!2.92e-10!6;CL:0000031!2.92e-10!6;CL:0000404!2.92e-10!6;CL:0000133!1.40e-09!59;CL:0000242!8.57e-09!2;CL:0000221!1.86e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.11e-41;2!CL:0000242;8.11e-41;2!CL:0000540;4.82e-30;6!CL:0000404;4.82e-30;6!CL:0002319;1.82e-18;25!CL:0000312;5.24e-17;5!CL:0000240;2.41e-14;6!CL:0000311;2.41e-14;6!CL:0000079;2.41e-14;6!CL:0000237;2.41e-14;6!CL:0000362;6.93e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.98e-41,2;CL:0000540,5.07e-30,6;CL:0000031,5.07e-30,6;CL:0000404,5.07e-30,6;CL:0000047,1.01e-22,8;CL:0002319,1.88e-18,25;CL:0000312,5.45e-17,5;CL:0000240,2.49e-14,6;CL:0000311,2.49e-14,6;CL:0000079,2.49e-14,6;CL:0000237,2.49e-14,6;CL:0000036,2.49e-14,6;CL:0000357,2.49e-14,6;CL:0000114,2.49e-14,6;CL:0000133,1.25e-11,59;CL:0000362,7.08e-10,9;CL:0000221,1.43e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000031;4.82e-30;6!CL:0000357;2.41e-14;6!CL:0000114;2.41e-14;6 | |||
|ontology_enrichment_disease=DOID:169!1.11e-09!6;DOID:171!1.07e-08!10;DOID:3095!7.89e-07!22;DOID:2994!7.89e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.74e-50!94;UBERON:0001016!1.74e-50!94;UBERON:0005743!7.68e-45!86;UBERON:0001017!1.25e-44!82;UBERON:0001049!4.46e-42!57;UBERON:0005068!4.46e-42!57;UBERON:0006241!4.46e-42!57;UBERON:0007135!4.46e-42!57;UBERON:0002616!2.01e-40!59;UBERON:0000955!9.54e-36!69;UBERON:0006238!9.54e-36!69;UBERON:0002780!5.37e-34!41;UBERON:0001890!5.37e-34!41;UBERON:0006240!5.37e-34!41;UBERON:0003080!4.52e-33!42;UBERON:0002346!1.51e-32!90;UBERON:0003075!5.03e-32!86;UBERON:0007284!5.03e-32!86;UBERON:0000924!1.03e-29!173;UBERON:0006601!1.03e-29!173;UBERON:0004121!6.03e-29!169;UBERON:0001893!2.73e-27!34;UBERON:0002020!3.58e-27!34;UBERON:0003528!3.58e-27!34;UBERON:0001869!5.78e-26!32;UBERON:0003056!1.38e-25!61;UBERON:0002791!5.55e-25!33;UBERON:0007023!1.82e-20!115;UBERON:0000153!4.82e-20!129;UBERON:0007811!4.82e-20!129;UBERON:0000033!7.47e-20!123;UBERON:0002619!3.70e-19!22;UBERON:0001950!1.24e-17!20;UBERON:0000956!1.23e-16!25;UBERON:0000203!1.23e-16!25;UBERON:0002308!8.83e-13!9;UBERON:0000125!8.83e-13!9;UBERON:0004733!9.38e-13!12;UBERON:0002028!9.38e-13!12;UBERON:0007277!9.38e-13!12;UBERON:0004732!1.07e-11!13;UBERON:0000013!1.31e-11!5;UBERON:0002410!1.31e-11!5;UBERON:0001871!1.38e-10!7;UBERON:0000988!1.85e-10!3;UBERON:0002298!2.72e-10!8;UBERON:0003076!5.22e-10!15;UBERON:0003057!5.22e-10!15;UBERON:0000200!2.45e-09!6;UBERON:0002420!3.17e-09!9;UBERON:0007245!3.17e-09!9;UBERON:0010009!3.17e-09!9;UBERON:0010011!3.17e-09!9;UBERON:0000454!3.17e-09!9;UBERON:0002680!5.43e-09!9;UBERON:0001895!5.43e-09!9;UBERON:0010092!5.43e-09!9;UBERON:0000369!3.41e-08!4;UBERON:0002435!3.41e-08!4;UBERON:0000204!3.41e-08!4;UBERON:0010082!3.41e-08!4;UBERON:0001894!3.93e-08!7;UBERON:0006222!3.93e-08!7;UBERON:0000007!4.86e-08!2;UBERON:0009663!7.31e-08!7;UBERON:0001897!7.65e-08!2;UBERON:0000025!1.49e-07!194;UBERON:0002148!1.80e-07!2;UBERON:0009662!1.80e-07!2;UBERON:0001872!5.77e-07!5;UBERON:0000349!6.13e-07!5 | |ontology_enrichment_uberon=UBERON:0000073!1.74e-50!94;UBERON:0001016!1.74e-50!94;UBERON:0005743!7.68e-45!86;UBERON:0001017!1.25e-44!82;UBERON:0001049!4.46e-42!57;UBERON:0005068!4.46e-42!57;UBERON:0006241!4.46e-42!57;UBERON:0007135!4.46e-42!57;UBERON:0002616!2.01e-40!59;UBERON:0000955!9.54e-36!69;UBERON:0006238!9.54e-36!69;UBERON:0002780!5.37e-34!41;UBERON:0001890!5.37e-34!41;UBERON:0006240!5.37e-34!41;UBERON:0003080!4.52e-33!42;UBERON:0002346!1.51e-32!90;UBERON:0003075!5.03e-32!86;UBERON:0007284!5.03e-32!86;UBERON:0000924!1.03e-29!173;UBERON:0006601!1.03e-29!173;UBERON:0004121!6.03e-29!169;UBERON:0001893!2.73e-27!34;UBERON:0002020!3.58e-27!34;UBERON:0003528!3.58e-27!34;UBERON:0001869!5.78e-26!32;UBERON:0003056!1.38e-25!61;UBERON:0002791!5.55e-25!33;UBERON:0007023!1.82e-20!115;UBERON:0000153!4.82e-20!129;UBERON:0007811!4.82e-20!129;UBERON:0000033!7.47e-20!123;UBERON:0002619!3.70e-19!22;UBERON:0001950!1.24e-17!20;UBERON:0000956!1.23e-16!25;UBERON:0000203!1.23e-16!25;UBERON:0002308!8.83e-13!9;UBERON:0000125!8.83e-13!9;UBERON:0004733!9.38e-13!12;UBERON:0002028!9.38e-13!12;UBERON:0007277!9.38e-13!12;UBERON:0004732!1.07e-11!13;UBERON:0000013!1.31e-11!5;UBERON:0002410!1.31e-11!5;UBERON:0001871!1.38e-10!7;UBERON:0000988!1.85e-10!3;UBERON:0002298!2.72e-10!8;UBERON:0003076!5.22e-10!15;UBERON:0003057!5.22e-10!15;UBERON:0000200!2.45e-09!6;UBERON:0002420!3.17e-09!9;UBERON:0007245!3.17e-09!9;UBERON:0010009!3.17e-09!9;UBERON:0010011!3.17e-09!9;UBERON:0000454!3.17e-09!9;UBERON:0002680!5.43e-09!9;UBERON:0001895!5.43e-09!9;UBERON:0010092!5.43e-09!9;UBERON:0000369!3.41e-08!4;UBERON:0002435!3.41e-08!4;UBERON:0000204!3.41e-08!4;UBERON:0010082!3.41e-08!4;UBERON:0001894!3.93e-08!7;UBERON:0006222!3.93e-08!7;UBERON:0000007!4.86e-08!2;UBERON:0009663!7.31e-08!7;UBERON:0001897!7.65e-08!2;UBERON:0000025!1.49e-07!194;UBERON:0002148!1.80e-07!2;UBERON:0009662!1.80e-07!2;UBERON:0001872!5.77e-07!5;UBERON:0000349!6.13e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;8.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,8.29e-08,2 | |||
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| ||
|short_description=p2@LOC643669 | |short_description=p2@LOC643669 | ||
}} | }} |
Latest revision as of 21:02, 17 September 2015
Short description: | p2@LOC643669 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC643669_5end |
Coexpression cluster: | C347_carcinoid_retinoblastoma_neuroblastoma_Mast_Smooth_parietal_Fibroblast |
Association with transcript: | -48bp_to_NM_001243212_5end |
EntrezGene: | LOC643669 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.98e-41 | 2 |
neuron | 5.07e-30 | 6 |
neuroblast | 5.07e-30 | 6 |
electrically signaling cell | 5.07e-30 | 6 |
neuronal stem cell | 1.01e-22 | 8 |
neural cell | 1.88e-18 | 25 |
keratinocyte | 5.45e-17 | 5 |
stratified squamous epithelial cell | 2.49e-14 | 6 |
keratin accumulating cell | 2.49e-14 | 6 |
stratified epithelial cell | 2.49e-14 | 6 |
keratinizing barrier epithelial cell | 2.49e-14 | 6 |
epithelial fate stem cell | 2.49e-14 | 6 |
stratified epithelial stem cell | 2.49e-14 | 6 |
surface ectodermal cell | 2.49e-14 | 6 |
neurectodermal cell | 1.25e-11 | 59 |
epidermal cell | 7.08e-10 | 9 |
ectodermal cell | 1.43e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
duodenum | 8.29e-08 | 2 |