FFCP PHASE1:Hg19::chr19:35521616..35521647,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier=strong | |||
|UniProt=Q07699 | |UniProt=Q07699 | ||
|association_with_transcript=24bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |association_with_transcript=24bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | ||
|cluster_id=chr19:35521616..35521647,+ | |||
|coexpression_cluster_id=C3776 | |||
|description=CAGE_peak_3_at_SCN1B_5end | |description=CAGE_peak_3_at_SCN1B_5end | ||
|id=chr19:35521616..35521647,+ | |id=chr19:35521616..35521647,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.04e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.87e-39!115;UBERON:0001049!5.87e-22!57;UBERON:0005068!5.87e-22!57;UBERON:0006241!5.87e-22!57;UBERON:0007135!5.87e-22!57;UBERON:0005743!9.95e-21!86;UBERON:0003075!2.80e-20!86;UBERON:0007284!2.80e-20!86;UBERON:0002616!9.00e-20!59;UBERON:0000955!1.23e-19!69;UBERON:0006238!1.23e-19!69;UBERON:0001017!2.67e-19!82;UBERON:0000025!7.13e-19!194;UBERON:0000073!7.30e-19!94;UBERON:0001016!7.30e-19!94;UBERON:0000477!3.55e-18!286;UBERON:0002346!5.71e-18!90;UBERON:0004111!6.40e-18!241;UBERON:0000483!1.87e-16!309;UBERON:0000119!2.61e-16!312;UBERON:0003080!3.84e-15!42;UBERON:0002780!1.20e-14!41;UBERON:0001890!1.20e-14!41;UBERON:0006240!1.20e-14!41;UBERON:0000033!2.50e-13!123;UBERON:0000475!3.57e-13!365;UBERON:0000153!5.57e-13!129;UBERON:0007811!5.57e-13!129;UBERON:0003056!8.57e-13!61;UBERON:0001893!1.57e-11!34;UBERON:0002020!1.71e-11!34;UBERON:0003528!1.71e-11!34;UBERON:0000481!4.51e-11!347;UBERON:0004121!4.81e-11!169;UBERON:0002791!6.82e-11!33;UBERON:0000468!7.23e-11!659;UBERON:0001869!1.63e-10!32;UBERON:0000924!5.19e-10!173;UBERON:0006601!5.19e-10!173;UBERON:0000467!8.80e-10!625;UBERON:0000480!1.29e-09!626;UBERON:0007100!2.06e-09!27;UBERON:0002619!6.20e-09!22;UBERON:0000062!1.27e-08!511;UBERON:0003076!3.66e-08!15;UBERON:0003057!3.66e-08!15;UBERON:0001950!4.12e-08!20;UBERON:0000948!1.27e-07!24;UBERON:0005498!1.27e-07!24;UBERON:0004140!1.27e-07!24;UBERON:0009881!1.27e-07!24;UBERON:0004141!1.27e-07!24;UBERON:0003084!1.27e-07!24;UBERON:0007005!1.27e-07!24;UBERON:0004139!1.27e-07!24;UBERON:0004291!1.27e-07!24;UBERON:0000956!2.19e-07!25;UBERON:0000203!2.19e-07!25;UBERON:0003103!4.47e-07!69;UBERON:0004732!5.11e-07!13;UBERON:0004872!7.13e-07!84;UBERON:0000922!8.06e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.82e-16;34!UBERON:0000073;1.82e-15;53!UBERON:0002616;1.82e-15;53!UBERON:0003528;3.39e-15;34!UBERON:0002020;3.39e-15;34!UBERON:0002780;6.58e-15;41!UBERON:0001890;6.58e-15;41!UBERON:0001869;9.46e-15;32!UBERON:0002619;1.29e-14;22!UBERON:0002791;1.70e-14;32!UBERON:0001950;3.48e-13;20!UBERON:0000956;3.30e-12;25!UBERON:0000203;3.30e-12;25!UBERON:0007023;4.32e-12;114!UBERON:0000955;3.07e-10;68!UBERON:0001017;3.77e-10;75!UBERON:0007100;8.43e-10;25!UBERON:0004732;5.75e-09;13!UBERON:0000200;2.60e-08;6!UBERON:0001016;3.46e-08;83!UBERON:0002298;4.43e-08;6!UBERON:0004733;5.23e-08;12!UBERON:0002028;5.23e-08;12!UBERON:0000125;1.51e-07;9!UBERON:0002308;1.51e-07;9!UBERON:0000948;3.43e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-49,114;UBERON:0001049,4.41e-31,56;UBERON:0005068,4.41e-31,56;UBERON:0006241,4.41e-31,56;UBERON:0007135,4.41e-31,56;UBERON:0010314,1.10e-29,132;UBERON:0000073,3.30e-28,53;UBERON:0002616,3.30e-28,53;UBERON:0003075,2.37e-25,82;UBERON:0007284,2.37e-25,82;UBERON:0002346,2.36e-23,86;UBERON:0001017,3.21e-22,81;UBERON:0000955,3.54e-22,68;UBERON:0006238,3.54e-22,68;UBERON:0002780,1.84e-21,41;UBERON:0001890,1.84e-21,41;UBERON:0003080,1.84e-21,41;UBERON:0006240,1.84e-21,41;UBERON:0001016,1.53e-19,89;UBERON:0001893,4.60e-18,34;UBERON:0010371,4.68e-18,104;UBERON:0003528,5.28e-18,34;UBERON:0002020,5.28e-18,34;UBERON:0000025,7.85e-17,192;UBERON:0001869,2.27e-16,32;UBERON:0003056,3.56e-16,61;UBERON:0002791,3.84e-16,32;UBERON:0002619,1.67e-14,22;UBERON:0004111,3.01e-13,240;UBERON:0001950,4.00e-13,20;UBERON:0000956,4.12e-12,25;UBERON:0000203,4.12e-12,25;UBERON:0000483,5.94e-11,306;UBERON:0003076,8.55e-11,15;UBERON:0003057,8.55e-11,15;UBERON:0000119,1.34e-10,309;UBERON:0004121,1.60e-10,171;UBERON:0000924,1.60e-10,171;UBERON:0006601,1.60e-10,171;UBERON:0007100,1.03e-09,27;UBERON:0003103,5.25e-09,68;UBERON:0004732,6.10e-09,13;UBERON:0000200,2.73e-08,6;UBERON:0002298,4.86e-08,6;UBERON:0004733,5.54e-08,12;UBERON:0002028,5.54e-08,12;UBERON:0007277,5.54e-08,12;UBERON:0011216,1.08e-07,223;UBERON:0000125,1.38e-07,9;UBERON:0002308,1.38e-07,9;UBERON:0000948,3.62e-07,24;UBERON:0005498,3.62e-07,24;UBERON:0004140,3.62e-07,24;UBERON:0009881,3.62e-07,24;UBERON:0004141,3.62e-07,24;UBERON:0003084,3.62e-07,24;UBERON:0007005,3.62e-07,24;UBERON:0004139,3.62e-07,24;UBERON:0004291,3.62e-07,24 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0.491467873003018,0,0,0,0.495065411840187,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.492484232307152,0.816002764977012,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,1.79132379391939,1.6194683300949,4.12120908214698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,2.43806866313962,3.35350429851818,3.19656404608826,3.61439152384566,2.00535164254356,2.60723734129483,0.795285947051099,6.32625331393427,0.283604451492204,0,0.175669571386252,2.81605012320082,0,0,0,0,0.132957960518865,0,0,0,0.993812036833525,3.4409383804245,2.08284300964557,1.69592382577203,2.09749718104953,0.550236083880135,1.04497483268405,0.775250277507987,0.71153252537342,0.33472061276467,1.20848795132744,0,0.732186172644509,0.735326160691737,0,0.357198913136319,0.673588117878509,0.450445921933289,0,1.89853131913626,1.28241220751285,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0.560677600142307,0,1.2333377420858,3.11211035399766,0.538842688278752,0.490385709340376,0.302714855289863,0.576175924479999,0,0.936480230490962,0.570471821544449,0.448346041655403,0,0.323745888736263,0,0.204154171254893,0.368502951935304,0.516628905878827,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.612975591598039,0.751190294532984,0.226864366320042,1.25572744982203,1.92201649936711,0,2.70081986475962,1.23663035086127,0,0.37223371266318,0.337552664482532,0.0974370051611986,0,0.644349290496095,0,4.61512470271599,1.91428986632517,0.847802961552438,0,0,0,0.243947412259191,0,0.232387885739037,0.621966330092223,0,0,0,1.92972281457866,1.38134921352481,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,1.2347220339942,0,0,0.982827216677626,1.77236972004421,0,0.122988438543114,0.171567810298526,0,0,0,0,0.977424915930974,0,0,0.231860809950154,0.469634776943287,1.01056513432752,1.38895653772983,0.761016608938393,4.74122638775565,8.58486162094873,1.23108503043699,0.234004265139238,1.78357394746474,0,0,0,0,0,0,0,0.088048434013226,0.829312462163088,1.72943944100354,1.2624243342638,0.063497894292169,0,0,0,0.205654985406647,0.600686115687835,0,0,0.43596006883328,0.1466765716419,1.16344544182,3.57656445851882,0,2.12750493267896,2.08014873822732,0,0,0.266422179016099,1.71573592389777,0.542621605391443,0,0.325736184293735,1.42156779497018,0.791951872933429,8.741741934728,3.48613383440118,2.19940580600526,0,0.502257091432126,0,0.479249710983165,0,0,0.144781306667579,1.64381058040307,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,4.5481500811197,1.03473071292505,0,0,0.347534457872331,6.46143819627044,2.40200396667599,0,0.215714200818617,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0,0.355123450626254,0,1.55776328755086,0,0.483437798366489,0,0,0.114814448164607,0.728364672026868,0.524497659837696,0,0,0,0,0.211103257785751,1.13733384070897,0.510281115829547,0.215915916102139,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0,0,0,0.769350375349168,1.31205858279882,1.30151357865721,0.9273691048295,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0.676695028044854,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0.267096106940212,0,0,0,0,1.39453664789186,0.94443704049192,0,0.924100740528266,0.532306030317022,0.869932992075073,0,0,0.744316738719335,0,0.762520775695299,1.535386747868,0.855877976067841,1.27281299170375,0,0.179872457583315,0.54907405947211,0.471249609382746,0.202182481573316,3.17020642346017,2.94880919367287,0.48763373908959,0.243713489631284,0,0.136499911407986,0.282810863907425,1.13008116620243,0.551365343546124,0,0,1.15755106853338,1.31178950409327,0.811641507850816,0,0.845086807596724,0.286822704408103,0.294747123039363,0,0,1.47775344708365,0.987884678879706,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,1.75809815126273,0,0,0,0,0.296964680832639,0,0.994147647766298,1.26602474769461,4.00711338082461,0,0,1.39473591775749,0.276283915531148,0,0.409074730008619,0,0.622079175323615,0,0,0,1.479651084554,0,0,15.5093239375235,11.9670846628788,0,0.260427761085233,0,2.89999830173917,0,0,0,0,0.583209226766509,0.520874984799877,2.65722415744152,0.723578631752448,12.2065389053667,6.85591411573593,41.6722142724502,7.45910350323507,0,0,1.38510465306835,22.6744691135532,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0.332423363800313,0.225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| ||
|short_description=p3@SCN1B | |short_description=p3@SCN1B | ||
}} | }} |
Latest revision as of 09:30, 17 September 2015
Short description: | p3@SCN1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCN1B_5end |
Coexpression cluster: | C3776_skeletal_occipital_cerebellum_pons_left_postcentral_paracentral |
Association with transcript: | 24bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data