FFCP PHASE1:Hg19::chr19:35491364..35491373,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57655 | |EntrezGene=57655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29305 | |HGNC=29305 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CP6 | |UniProt=Q96CP6 | ||
|association_with_transcript=118bp_to_ENST00000317991,ENST00000411896,NM_001136199,NM_020895,uc002nxk.2,uc002nxl.2,uc010xse.1_5end | |association_with_transcript=118bp_to_ENST00000317991,ENST00000411896,NM_001136199,NM_020895,uc002nxk.2,uc002nxl.2,uc010xse.1_5end | ||
|cluster_id=chr19:35491364..35491373,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_GRAMD1A_5end | |description=CAGE_peak_3_at_GRAMD1A_5end | ||
|id=chr19:35491364..35491373,+ | |id=chr19:35491364..35491373,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.23e-14!254;CL:0000860!5.86e-13!45;CL:0002057!4.33e-12!42;CL:0000766!2.72e-10!76;CL:0002009!5.52e-10!65;CL:0000557!1.30e-09!71;CL:0000548!1.61e-09!679;CL:0000004!1.61e-09!679;CL:0000255!1.61e-09!679;CL:0002194!2.44e-09!63;CL:0000576!2.44e-09!63;CL:0000040!2.44e-09!63;CL:0000559!2.44e-09!63;CL:0000012!3.58e-09!682;CL:0000063!1.28e-08!578;CL:0000839!1.65e-08!70;CL:0002321!4.47e-08!248;CL:0000220!6.37e-08!246 | |ontology_enrichment_celltype=CL:0000066!4.23e-14!254;CL:0000860!5.86e-13!45;CL:0002057!4.33e-12!42;CL:0000766!2.72e-10!76;CL:0002009!5.52e-10!65;CL:0000557!1.30e-09!71;CL:0000548!1.61e-09!679;CL:0000004!1.61e-09!679;CL:0000255!1.61e-09!679;CL:0002194!2.44e-09!63;CL:0000576!2.44e-09!63;CL:0000040!2.44e-09!63;CL:0000559!2.44e-09!63;CL:0000012!3.58e-09!682;CL:0000063!1.28e-08!578;CL:0000839!1.65e-08!70;CL:0002321!4.47e-08!248;CL:0000220!6.37e-08!246 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.32e-09;33!CL:0002057;5.32e-09;33!CL:0000473;3.74e-08;39!CL:0000234;3.74e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-11,42;CL:0002057,1.14e-11,42;CL:0000473,1.47e-11,48;CL:0000234,1.47e-11,48;CL:0000766,1.73e-10,72;CL:0002009,7.45e-10,61;CL:0002194,2.11e-09,59;CL:0000576,2.11e-09,59;CL:0000040,2.11e-09,59;CL:0000559,2.11e-09,59;CL:0000557,2.86e-08,67;CL:0000763,5.17e-08,108;CL:0000049,5.17e-08,108;CL:0000839,1.28e-07,66;CL:0000066,1.47e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.83e-12!448;UBERON:0004120!1.83e-12!448;UBERON:0006603!1.83e-12!448;UBERON:0000467!9.56e-09!625;UBERON:0000480!1.56e-08!626;UBERON:0003081!6.37e-08!216;UBERON:0000468!1.02e-07!659;UBERON:0004765!6.43e-07!101;UBERON:0001434!6.43e-07!101;UBERON:0002204!6.78e-07!167;UBERON:0002371!7.44e-07!80 | |ontology_enrichment_uberon=UBERON:0000926!1.83e-12!448;UBERON:0004120!1.83e-12!448;UBERON:0006603!1.83e-12!448;UBERON:0000467!9.56e-09!625;UBERON:0000480!1.56e-08!626;UBERON:0003081!6.37e-08!216;UBERON:0000468!1.02e-07!659;UBERON:0004765!6.43e-07!101;UBERON:0001434!6.43e-07!101;UBERON:0002204!6.78e-07!167;UBERON:0002371!7.44e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-08;9!UBERON:0001557;1.57e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.97e-08,9;UBERON:0002371,5.92e-07,76 | |||
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| ||
|short_description=p3@GRAMD1A | |short_description=p3@GRAMD1A | ||
}} | }} |
Latest revision as of 09:16, 17 September 2015
Short description: | p3@GRAMD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRAMD1A_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 118bp_to_ENST00000317991, ENST00000411896, NM_001136199, NM_020895, uc002nxk.2, uc002nxl.2, uc010xse.1_5end |
EntrezGene: | GRAMD1A |
HGNC: | 29305 |
UniProt: | Q96CP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.14e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-11 | 42 |
defensive cell | 1.47e-11 | 48 |
phagocyte | 1.47e-11 | 48 |
myeloid leukocyte | 1.73e-10 | 72 |
macrophage dendritic cell progenitor | 7.45e-10 | 61 |
monopoietic cell | 2.11e-09 | 59 |
monocyte | 2.11e-09 | 59 |
monoblast | 2.11e-09 | 59 |
promonocyte | 2.11e-09 | 59 |
granulocyte monocyte progenitor cell | 2.86e-08 | 67 |
myeloid cell | 5.17e-08 | 108 |
common myeloid progenitor | 5.17e-08 | 108 |
myeloid lineage restricted progenitor cell | 1.28e-07 | 66 |
epithelial cell | 1.47e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.97e-08 | 9 |
bone marrow | 5.92e-07 | 76 |