FFCP PHASE1:Hg19::chr19:32863977..32863981,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:32863977..32863981,- | |||
|coexpression_cluster_id=C839 | |||
|description=CAGE_peak_at_chr19:32863977..32863981,- | |description=CAGE_peak_at_chr19:32863977..32863981,- | ||
|id=chr19:32863977..32863981,- | |id=chr19:32863977..32863981,- | ||
|ontology_enrichment_celltype=CL:0002586!1.43e-07!3 | |ontology_enrichment_celltype=CL:0002586!1.43e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.58e-34;1!CL:0000159;6.48e-18;2!CL:0002586;1.85e-12;3!CL:0000149;1.12e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.58e-34,1;CL:0000159,6.48e-18,2;CL:0002586,1.85e-12,3;CL:0000149,1.12e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.47e-07!106 | |ontology_enrichment_disease=DOID:305!1.47e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3030;2.58e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.58e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0001896!2.97e-15!3;UBERON:0005290!2.97e-15!3;UBERON:0010096!2.97e-15!3;UBERON:0002298!1.01e-09!8;UBERON:0001781!1.43e-07!3;UBERON:0001782!1.43e-07!3;UBERON:0005424!1.43e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.53e-44;3!UBERON:0005290;1.53e-44;3!UBERON:0007195;7.06e-34;1!UBERON:0002298;6.78e-23;6!UBERON:0001781;1.85e-12;3!UBERON:0001782;1.85e-12;3!UBERON:0004733;5.37e-12;12!UBERON:0002028;5.37e-12;12!UBERON:0004732;3.75e-11;13!UBERON:0000966;5.35e-08;5!UBERON:0005388;5.35e-08;5!UBERON:0001802;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.53e-44,3;UBERON:0005290,1.53e-44,3;UBERON:0010096,1.53e-44,3;UBERON:0007195,9.85e-34,1;UBERON:0002298,6.78e-23,6;UBERON:0001782,1.85e-12,3;UBERON:0005424,1.85e-12,3;UBERON:0004733,5.37e-12,12;UBERON:0002028,5.37e-12,12;UBERON:0007277,5.37e-12,12;UBERON:0004732,3.75e-11,13;UBERON:0003076,8.46e-10,15;UBERON:0003057,8.46e-10,15;UBERON:0001781,1.12e-09,4;UBERON:0000966,7.17e-07,6;UBERON:0005388,7.17e-07,6;UBERON:0001802,7.17e-07,6 | |||
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|short_description=p@chr19:32863977..32863981,- | |short_description=p@chr19:32863977..32863981,- | ||
}} | }} |
Latest revision as of 06:13, 26 July 2015
Short description: | p@chr19:32863977..32863981, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:32863977..32863981, - |
Coexpression cluster: | C839_Retinal_Mallassezderived_retina_medulla_mesothelioma_osteosarcoma_Saos2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.58e-34 | 1 |
seromucus secreting cell | 6.48e-18 | 2 |
retinal pigment epithelial cell | 1.85e-12 | 3 |
visual pigment cell | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.53e-44 | 3 |
myelencephalon | 1.53e-44 | 3 |
future myelencephalon | 1.53e-44 | 3 |
stroma of bone marrow | 9.85e-34 | 1 |
brainstem | 6.78e-23 | 6 |
pigmented layer of retina | 1.85e-12 | 3 |
presumptive retinal pigmented epithelium | 1.85e-12 | 3 |
segmental subdivision of hindbrain | 5.37e-12 | 12 |
hindbrain | 5.37e-12 | 12 |
presumptive hindbrain | 5.37e-12 | 12 |
segmental subdivision of nervous system | 3.75e-11 | 13 |
posterior neural tube | 8.46e-10 | 15 |
chordal neural plate | 8.46e-10 | 15 |
layer of retina | 1.12e-09 | 4 |
retina | 7.17e-07 | 6 |
photoreceptor array | 7.17e-07 | 6 |
posterior segment of eyeball | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.58e-34 | 1 |