FFCP PHASE1:Hg19::chr19:18539913..18539930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18539913..18539930,+ | |||
|description=CAGE_peak_at_chr19:18539913..18539930,+ | |description=CAGE_peak_at_chr19:18539913..18539930,+ | ||
|id=chr19:18539913..18539930,+ | |id=chr19:18539913..18539930,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.32e-09!18;CL:0000789!6.32e-09!18;CL:0002420!6.32e-09!18;CL:0002419!6.32e-09!18;CL:0000790!6.32e-09!18;CL:0000838!2.45e-08!52;CL:0000542!5.34e-08!53;CL:0000051!5.34e-08!53 | |ontology_enrichment_celltype=CL:0000791!6.32e-09!18;CL:0000789!6.32e-09!18;CL:0002420!6.32e-09!18;CL:0002419!6.32e-09!18;CL:0000790!6.32e-09!18;CL:0000838!2.45e-08!52;CL:0000542!5.34e-08!53;CL:0000051!5.34e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.68e-08;3!CL:0000542;3.93e-08;53!CL:0000791;1.11e-07;18!CL:0000789;1.11e-07;18!CL:0002419;1.11e-07;18!CL:0002591;2.16e-07;1!CL:0000236;2.99e-07;13!CL:0000167;5.44e-07;1!CL:0000164;5.44e-07;1!CL:0000502;5.44e-07;1!CL:0000172;5.44e-07;1!CL:0000895;5.44e-07;1!CL:0000173;5.44e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.78e-11,52;CL:0000542,4.97e-11,53;CL:0000051,4.97e-11,53;CL:0000623,1.34e-08,3;CL:0000825,1.34e-08,3;CL:0000791,1.00e-07,18;CL:0000789,1.00e-07,18;CL:0002420,1.00e-07,18;CL:0002419,1.00e-07,18;CL:0000790,1.00e-07,18;CL:0002591,2.23e-07,1;CL:0000810,2.67e-07,1;CL:0000895,2.67e-07,1;CL:0002436,2.67e-07,1;CL:0002427,2.67e-07,1;CL:0002428,2.67e-07,1;CL:0002429,2.67e-07,1;CL:0002433,2.67e-07,1;CL:0002431,2.67e-07,1;CL:0002432,2.67e-07,1;CL:0000167,7.29e-07,1;CL:0000164,7.29e-07,1;CL:0000502,7.29e-07,1;CL:0000172,7.29e-07,1;CL:0000173,7.29e-07,1;CL:0002351,7.29e-07,1;CL:0000236,7.69e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;3.93e-08;53!CL:0000790;1.11e-07;18!UBERON:0000358;2.16e-07;1!CL:0002351;5.44e-07;1!CL:0002427;5.44e-07;1!UBERON:0006222;5.44e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;5.44e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,7.29e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.35e-14!57;UBERON:0005068!3.35e-14!57;UBERON:0006241!3.35e-14!57;UBERON:0007135!3.35e-14!57;UBERON:0003075!2.10e-13!86;UBERON:0007284!2.10e-13!86;UBERON:0002616!5.94e-13!59;UBERON:0000955!1.48e-12!69;UBERON:0006238!1.48e-12!69;UBERON:0002346!4.56e-12!90;UBERON:0005743!5.82e-12!86;UBERON:0002780!7.96e-12!41;UBERON:0001890!7.96e-12!41;UBERON:0006240!7.96e-12!41;UBERON:0003080!2.63e-11!42;UBERON:0000153!2.92e-11!129;UBERON:0007811!2.92e-11!129;UBERON:0001017!4.06e-11!82;UBERON:0000073!4.55e-11!94;UBERON:0001016!4.55e-11!94;UBERON:0003056!4.87e-11!61;UBERON:0000033!2.55e-09!123;UBERON:0007023!8.62e-09!115;UBERON:0001893!8.97e-09!34;UBERON:0001869!1.14e-08!32;UBERON:0002020!1.18e-08!34;UBERON:0003528!1.18e-08!34;UBERON:0002791!3.43e-08!33;UBERON:0000956!3.71e-08!25;UBERON:0000203!3.71e-08!25;UBERON:0002619!3.97e-07!22 | |ontology_enrichment_uberon=UBERON:0001049!3.35e-14!57;UBERON:0005068!3.35e-14!57;UBERON:0006241!3.35e-14!57;UBERON:0007135!3.35e-14!57;UBERON:0003075!2.10e-13!86;UBERON:0007284!2.10e-13!86;UBERON:0002616!5.94e-13!59;UBERON:0000955!1.48e-12!69;UBERON:0006238!1.48e-12!69;UBERON:0002346!4.56e-12!90;UBERON:0005743!5.82e-12!86;UBERON:0002780!7.96e-12!41;UBERON:0001890!7.96e-12!41;UBERON:0006240!7.96e-12!41;UBERON:0003080!2.63e-11!42;UBERON:0000153!2.92e-11!129;UBERON:0007811!2.92e-11!129;UBERON:0001017!4.06e-11!82;UBERON:0000073!4.55e-11!94;UBERON:0001016!4.55e-11!94;UBERON:0003056!4.87e-11!61;UBERON:0000033!2.55e-09!123;UBERON:0007023!8.62e-09!115;UBERON:0001893!8.97e-09!34;UBERON:0001869!1.14e-08!32;UBERON:0002020!1.18e-08!34;UBERON:0003528!1.18e-08!34;UBERON:0002791!3.43e-08!33;UBERON:0000956!3.71e-08!25;UBERON:0000203!3.71e-08!25;UBERON:0002619!3.97e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.96e-13;2!UBERON:0001894;4.86e-08;7!UBERON:0002171;2.16e-07;1!UBERON:0006518;2.16e-07;1!UBERON:0008949;2.16e-07;1!UBERON:0000101;2.16e-07;1!UBERON:0002167;2.16e-07;1!UBERON:0003296;7.96e-07;4!UBERON:0010133;7.96e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.96e-13,2;UBERON:0001894,3.56e-08,7;UBERON:0006222,3.56e-08,7;UBERON:0002171,2.52e-07,1;UBERON:0006518,2.52e-07,1;UBERON:0008949,2.52e-07,1;UBERON:0000101,2.52e-07,1;UBERON:0002167,2.52e-07,1;UBERON:0003296,6.90e-07,4;UBERON:0010133,6.90e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,0.786728553697808,0,1.39334510984468,0,0,0,0.0774672005803016,0,0.293600439334847,0.553995408531877,0,0.217010870715852,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,1.14005097496499,0.39783335439818,0.547992461293902,0,0,0,0.853460445133014,0.400395987036012,1.72425731986345,0,0.954053754535364,1.1384259382189,2.93618594685469,1.91136614062614,0,0.560508562981536,0,0.393419540227666,0.786021525498329,1.85041349099558,0.167186495390678,0,1.4203434172042,3.89653456815823,0.334231370655521,0.294605907474837,0.443067789167242,0.270803863765016,0.768547918354051,0.780356085359269,0,0,0,0.444859689486181,0.535081656179426,2.09071047609954,0.679856056185397,1.91610246800961,3.77990190030893,0.253019692019503,0.318565414324097,0,0.950452044448374,0.150575119077773,0.639933055772092,1.24930726552346,0.947109008176067,0,1.41124720257313,0.802320587350522,1.01377082717959,0,0,0,0,0,0.434539556882471,0.795285947051099,1.45990461090791,0.189069634328136,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0.49333509683432,0,0,0,0,0,0.468642863667593,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.619954687054593,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0.358779271377724,0.213557388818567,0,0.900273288253207,0,1.28820270022815,0.37223371266318,0.675105328965065,0.292311015483596,0,0.460249493211497,0,1.06502877754984,0.302256294682921,0.169560592310488,0.386521706326594,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,1.62786481617433,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,1.50939302401662,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0.604780586659361,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0.55597265731176,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0.606547444719948,0,0,0,0.243713489631284,1.05650146756755,0.682499557039929,0,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.427296284509893,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0.796991953004279,0.276283915531148,0.251932747854276,0,0.123084805461069,0.311039587661807,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0,0.295547618953547,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0,0.104421949505455,0.67401132980677,0,1.63985112007737,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.698906672968121,0.171986032471617,0,0,0,0,0,0.677942222341597,0.274083849293502,0,0.379864775735272,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0.407712618220842,0.418411385249333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,0,0.77380195455795,0.364497339948148,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0.339936274560377,0,0,0.646414781807753,0.39669780522807,0,0,1.06787412567695,0.943225830597996,2.07119527673598,0,0,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0.500763722825999,0.573409195690071,0.887432412294818,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0.383683113910955,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0.449604575675217,0,0,0.615349092722265,0.5041433924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| ||
|short_description=p@chr19:18539913..18539930,+ | |short_description=p@chr19:18539913..18539930,+ | ||
}} | }} |
Latest revision as of 05:11, 26 July 2015
Short description: | p@chr19:18539913..18539930, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18539913..18539930, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.96e-13 | 2 |
diencephalon | 3.56e-08 | 7 |
future diencephalon | 3.56e-08 | 7 |
lower lobe of right lung | 2.52e-07 | 1 |
right lung lobe | 2.52e-07 | 1 |
lower lobe of lung | 2.52e-07 | 1 |
lobe of lung | 2.52e-07 | 1 |
right lung | 2.52e-07 | 1 |
gland of diencephalon | 6.90e-07 | 4 |
neuroendocrine gland | 6.90e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.29e-07 | 1 |