FFCP PHASE1:Hg19::chr19:1753520..1753529,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390874 | |EntrezGene=390874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13399 | |HGNC=13399 | ||
|TSSclassifier=strong | |||
|UniProt=O60422 | |UniProt=O60422 | ||
|association_with_transcript=-132bp_to_NM_001080488,uc010xgr.1_5end | |association_with_transcript=-132bp_to_NM_001080488,uc010xgr.1_5end | ||
|cluster_id=chr19:1753520..1753529,+ | |||
|coexpression_cluster_id=C3764 | |||
|description=CAGE_peak_2_at_ONECUT3_5end | |description=CAGE_peak_2_at_ONECUT3_5end | ||
|id=chr19:1753520..1753529,+ | |id=chr19:1753520..1753529,+ | ||
|ontology_enrichment_celltype=CL:0002178!4.89e-13!3;CL:0002076!6.66e-07!43 | |ontology_enrichment_celltype=CL:0002178!4.89e-13!3;CL:0002076!6.66e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.53e-44;3!CL:0002251;1.38e-07;20!CL:0002149;8.97e-07;6!CL:0002255;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.22e-44,3;CL:0002076,8.52e-08,42;CL:0002251,1.33e-07,20;CL:0002149,9.49e-07,6;CL:0002255,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.06e-34;1 | |||
|ontology_enrichment_disease=DOID:3493!3.75e-19!2;DOID:299!1.06e-16!25;DOID:305!9.85e-12!106;DOID:0050687!3.19e-11!143;DOID:3111!2.84e-10!1;DOID:3603!2.84e-10!1;DOID:162!8.45e-08!235;DOID:14566!1.41e-07!239 | |ontology_enrichment_disease=DOID:3493!3.75e-19!2;DOID:299!1.06e-16!25;DOID:305!9.85e-12!106;DOID:0050687!3.19e-11!143;DOID:3111!2.84e-10!1;DOID:3603!2.84e-10!1;DOID:162!8.45e-08!235;DOID:14566!1.41e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.45e-66;2!DOID:299;1.28e-21;25!DOID:3119;1.99e-10;14!DOID:3001;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.45e-66,2;DOID:299,1.28e-21,25;DOID:3119,1.90e-10,14;DOID:3001,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002110!1.19e-12!3;UBERON:0006242!1.19e-12!3;UBERON:0002294!8.76e-12!7;UBERON:0001173!8.76e-12!7;UBERON:0004912!8.76e-12!7 | |ontology_enrichment_uberon=UBERON:0002110!1.19e-12!3;UBERON:0006242!1.19e-12!3;UBERON:0002294!8.76e-12!7;UBERON:0001173!8.76e-12!7;UBERON:0004912!8.76e-12!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;3.11e-27;5!UBERON:0010039;3.11e-27;5!UBERON:0002110;2.89e-12;3!UBERON:0001041;1.99e-10;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.71e-17,8;UBERON:0010039,1.71e-17,8;UBERON:0002110,2.89e-12,3;UBERON:0006242,2.89e-12,3 | |||
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|short_description=p2@ONECUT3 | |short_description=p2@ONECUT3 | ||
}} | }} |
Latest revision as of 12:13, 16 September 2015
Short description: | p2@ONECUT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ONECUT3_5end |
Coexpression cluster: | C3764_rhabdomyosarcoma_signet_gastric_gall_giant_endometrioid_adenocarcinoma |
Association with transcript: | -132bp_to_NM_001080488, uc010xgr.1_5end |
EntrezGene: | ONECUT3 |
HGNC: | 13399 |
UniProt: | O60422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.22e-44 | 3 |
endo-epithelial cell | 8.52e-08 | 42 |
epithelial cell of alimentary canal | 1.33e-07 | 20 |
epithelial cell of uterus | 9.49e-07 | 6 |
stromal cell of endometrium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.71e-17 | 8 |
food storage organ | 1.71e-17 | 8 |
gallbladder | 2.89e-12 | 3 |
gall bladder primordium | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.45e-66 | 2 |
adenocarcinoma | 1.28e-21 | 25 |
gastrointestinal system cancer | 1.90e-10 | 14 |
female reproductive endometrioid cancer | 9.49e-07 | 6 |