FFCP PHASE1:Hg19::chr19:15751689..15751715,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4051 | |EntrezGene=4051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2646 | |HGNC=2646 | ||
|TSSclassifier=strong | |||
|UniProt=Q08477,F5H469,B7Z8Z3 | |UniProt=Q08477,F5H469,B7Z8Z3 | ||
|association_with_transcript=0bp_to_ENST00000221307,ENST00000538865,NM_000896,NM_001199208,NM_001199209,uc002nbj.2,uc010xok.1,uc010xol.1,uc010xom.1_5end | |association_with_transcript=0bp_to_ENST00000221307,ENST00000538865,NM_000896,NM_001199208,NM_001199209,uc002nbj.2,uc010xok.1,uc010xol.1,uc010xom.1_5end | ||
|cluster_id=chr19:15751689..15751715,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_CYP4F3_5end | |description=CAGE_peak_4_at_CYP4F3_5end | ||
|id=chr19:15751689..15751715,+ | |id=chr19:15751689..15751715,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.49e-18!45;CL:0002057!3.59e-16!42;CL:0000766!2.24e-11!76;CL:0002009!1.21e-10!65;CL:0002194!2.69e-10!63;CL:0000576!2.69e-10!63;CL:0000040!2.69e-10!63;CL:0000559!2.69e-10!63;CL:0000839!9.50e-10!70;CL:0000557!6.43e-09!71 | |ontology_enrichment_celltype=CL:0000860!4.49e-18!45;CL:0002057!3.59e-16!42;CL:0000766!2.24e-11!76;CL:0002009!1.21e-10!65;CL:0002194!2.69e-10!63;CL:0000576!2.69e-10!63;CL:0000040!2.69e-10!63;CL:0000559!2.69e-10!63;CL:0000839!9.50e-10!70;CL:0000557!6.43e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.85e-10;3!CL:0000094;5.25e-10;8!CL:0000771;1.51e-07;2!CL:0000860;2.71e-07;33!CL:0002057;2.71e-07;33!CL:0000081;3.90e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.86e-10,3;CL:0000094,5.28e-10,8;CL:0000771,1.51e-07,2;CL:0000081,3.91e-07,11;CL:0000766,9.34e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:4929,9.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.89e-24!115;UBERON:0002390!1.43e-14!102;UBERON:0003061!1.43e-14!102;UBERON:0002193!1.02e-12!112;UBERON:0000178!3.60e-10!15;UBERON:0000179!3.60e-10!15;UBERON:0000463!3.60e-10!15;UBERON:0002405!4.93e-10!115;UBERON:0009497!2.12e-08!25;UBERON:0000015!2.12e-08!25;UBERON:0002423!2.12e-08!25;UBERON:0006235!2.12e-08!25;UBERON:0004161!2.12e-08!25;UBERON:0002294!1.02e-07!7;UBERON:0001173!1.02e-07!7;UBERON:0004912!1.02e-07!7;UBERON:0002371!1.92e-07!80;UBERON:0004921!3.46e-07!129;UBERON:0004185!3.46e-07!129;UBERON:0000062!4.78e-07!511;UBERON:0001007!6.19e-07!155;UBERON:0001555!6.19e-07!155;UBERON:0007026!6.19e-07!155 | |ontology_enrichment_uberon=UBERON:0007023!8.89e-24!115;UBERON:0002390!1.43e-14!102;UBERON:0003061!1.43e-14!102;UBERON:0002193!1.02e-12!112;UBERON:0000178!3.60e-10!15;UBERON:0000179!3.60e-10!15;UBERON:0000463!3.60e-10!15;UBERON:0002405!4.93e-10!115;UBERON:0009497!2.12e-08!25;UBERON:0000015!2.12e-08!25;UBERON:0002423!2.12e-08!25;UBERON:0006235!2.12e-08!25;UBERON:0004161!2.12e-08!25;UBERON:0002294!1.02e-07!7;UBERON:0001173!1.02e-07!7;UBERON:0004912!1.02e-07!7;UBERON:0002371!1.92e-07!80;UBERON:0004921!3.46e-07!129;UBERON:0004185!3.46e-07!129;UBERON:0000062!4.78e-07!511;UBERON:0001007!6.19e-07!155;UBERON:0001555!6.19e-07!155;UBERON:0007026!6.19e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.91e-15;15!UBERON:0000179;3.91e-15;15!UBERON:0000463;3.91e-15;15!UBERON:0002423;7.30e-10;25!UBERON:0002294;5.26e-07;7!UBERON:0001173;5.26e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.68e-15,15;UBERON:0000179,3.68e-15,15;UBERON:0000463,3.68e-15,15;UBERON:0009497,6.79e-10,25;UBERON:0000015,6.79e-10,25;UBERON:0002423,6.79e-10,25;UBERON:0006235,6.79e-10,25;UBERON:0004161,6.79e-10,25;UBERON:0002390,5.74e-08,98;UBERON:0003061,5.74e-08,98;UBERON:0002193,1.35e-07,108;UBERON:0008835,2.17e-07,22;UBERON:0003894,2.17e-07,22;UBERON:0001041,3.32e-07,87;UBERON:0009854,5.25e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0.293600439334847,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,1.16318591023652,0,1.21292030593908,0.464858073811369,0,1.85823822537062,0.575384784644301,0.256160706529101,0.709446689665756,1.03423704220986,0,0,1.31769637679823,0,0.224723484445085,1.53041946185451,0.641858054152187,0.639337125799041,0.989553900560148,0.398927315243264,1.27867425159808,0.290209238628584,0,1.24564449799115,0.502497330513487,0.521482918420201,0.868755378820466,1.21079900526674,0.368277635987565,1.26584954976354,0,0.212604299965044,0,0.786300418025466,0.450530678524519,1.12507910687956,0,0,0,0,0,0,1.28019066769952,0,0,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,4.99722906209383,0.473554504088034,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.6572713334411,151.234303017847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,3.80265104465493,4.91413608338813,5.90789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.6497094186654,98.7232815373282,112.721019654602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,1.68471475667626,0,0,12.6861902308042,3.82318603571188,21.076945925444,6.19402616190251,3.29089818468955,13.6179395350471,6.48037724685738,18.2418790547682,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06103206853459,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,22.5566680091268,0,0.690503839458535,11.974154617347,0,0,0.0927680981618513,0,0,0,0,1.2517279311405,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,3.06732237412927,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.442287822516696,1.83309043480088,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,1.19472429772959,0.853828638089378,0.138674673013139,0.694238953340524,0.489961987071888,1.30588809870604,0,0.171986032471617,0.387025325156341,0.365446585430928,0.492692742319255,3.20063754411784,0,0,0,0,0.126621591911757,1.95551382734803,0.881747022766871,4.69596588426576,0,2.59362750877391,0,0,0,0,0.235694034616795,0.135904206073614,0.313808538937,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0,4.19325901047881,0,0.223171457441873,0.268733889946905,0,1.16495949527454,0.315132729228895,0.247247575143499,0.471824806979294,0,0,0,0.272406812223151,0,0,0,0,3.0952078182318,0.182248669974074,1.34173875039706,1.49730843868477,0.0524545881349981,0,1.07572403599707,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,6.00864158080138,6.62534444561107,0,0.26446520348538,12.3182523276717,4.9337051562167,0.747511887973863,0,1.65695622138878,0,0,0,0,0,0,0,0,2.19875734750328,0,0.244052529803926,0.500763722825999,0,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,1.0362910251936,0,0.414775308455192,0,0,0,0,9.33937053264133,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.0642292250964595,0,0.638535436228605,0,0,0.0691572524642179,0.161475645631851,0,0.981477185010256,0.353909170043221,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0,11.5327747249295,0.135075169236789,0,0.206686796501184,0.317079050969534,0,0,1.48863353516788,0,0.638812138197976,0,0,0,0,0,0,0,0,0.197318320688547,0.709163045303809,0,0.313972371402056,0,0,0,0,0.47775168788705,0.142953088353313,0,0,0,0,0.207216164163037,0.85359238546975,3.45629830907046,0,0,0,0,0.22910686854405,0,0,0,0,4.14520944939716,0.647428837187895,0,0,0.971421986118279,0,0,0,0.45178432815584,0,0,1.46630900405095,0.655678681511872,0,0.245148321753905,0,0,0.594092800654172,0.4226557275834,0,0.563903507879121,0.966868319603658,0,2.14264726326789,0,0.0802413666891683,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.620597975171371,2.98527574661373,0.23806443146374,0.193766729508018,0.558672428662721,0,0.12729431655633,0,2.39488422686657,0.342233301085281,1.6164492723501,1.72133292942423,0,0.488419611665847,0,0,1.43720323370539,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p4@CYP4F3 | |short_description=p4@CYP4F3 | ||
}} | }} |
Latest revision as of 08:16, 16 September 2015
Short description: | p4@CYP4F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYP4F3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000221307, ENST00000538865, NM_000896, NM_001199208, NM_001199209, uc002nbj.2, uc010xok.1, uc010xol.1, uc010xom.1_5end |
EntrezGene: | CYP4F3 |
HGNC: | 2646 |
UniProt: | Q08477F5H469B7Z8Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.86e-10 | 3 |
granulocyte | 5.28e-10 | 8 |
eosinophil | 1.51e-07 | 2 |
blood cell | 3.91e-07 | 11 |
myeloid leukocyte | 9.34e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 3.68e-15 | 15 |
haemolymphatic fluid | 3.68e-15 | 15 |
organism substance | 3.68e-15 | 15 |
epithelium of foregut-midgut junction | 6.79e-10 | 25 |
anatomical boundary | 6.79e-10 | 25 |
hepatobiliary system | 6.79e-10 | 25 |
foregut-midgut junction | 6.79e-10 | 25 |
septum transversum | 6.79e-10 | 25 |
hematopoietic system | 5.74e-08 | 98 |
blood island | 5.74e-08 | 98 |
hemolymphoid system | 1.35e-07 | 108 |
hepatic diverticulum | 2.17e-07 | 22 |
liver primordium | 2.17e-07 | 22 |
foregut | 3.32e-07 | 87 |
digestive tract diverticulum | 5.25e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 9.28e-07 | 2 |