FFCP PHASE1:Hg19::chr19:13317729..13317738,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13317729..13317738,- | |||
|coexpression_cluster_id=C586 | |||
|description=CAGE_peak_at_chr19:13317729..13317738,- | |description=CAGE_peak_at_chr19:13317729..13317738,- | ||
|id=chr19:13317729..13317738,- | |id=chr19:13317729..13317738,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.14e-26;2!CL:0002535;7.14e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.18e-26,2;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.76e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;3.26e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.60e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001893!3.94e-33!34;UBERON:0001869!2.98e-32!32;UBERON:0001049!2.59e-31!57;UBERON:0005068!2.59e-31!57;UBERON:0006241!2.59e-31!57;UBERON:0007135!2.59e-31!57;UBERON:0002791!6.01e-31!33;UBERON:0001017!9.34e-31!82;UBERON:0002616!5.10e-30!59;UBERON:0002020!5.72e-30!34;UBERON:0003528!5.72e-30!34;UBERON:0002780!2.74e-29!41;UBERON:0001890!2.74e-29!41;UBERON:0006240!2.74e-29!41;UBERON:0005743!5.99e-29!86;UBERON:0000955!1.67e-28!69;UBERON:0006238!1.67e-28!69;UBERON:0003080!1.82e-28!42;UBERON:0002619!5.00e-27!22;UBERON:0001950!7.34e-26!20;UBERON:0000073!1.97e-25!94;UBERON:0001016!1.97e-25!94;UBERON:0000956!1.89e-23!25;UBERON:0000203!1.89e-23!25;UBERON:0003075!1.39e-21!86;UBERON:0007284!1.39e-21!86;UBERON:0002346!2.71e-20!90;UBERON:0003056!1.07e-19!61;UBERON:0000033!4.11e-15!123;UBERON:0004121!1.98e-14!169;UBERON:0000153!4.68e-14!129;UBERON:0007811!4.68e-14!129;UBERON:0000924!6.83e-14!173;UBERON:0006601!6.83e-14!173;UBERON:0001871!9.67e-14!7;UBERON:0000200!8.57e-13!6;UBERON:0007023!3.84e-12!115;UBERON:0002771!3.80e-10!3;UBERON:0002420!3.75e-08!9;UBERON:0007245!3.75e-08!9;UBERON:0010009!3.75e-08!9;UBERON:0010011!3.75e-08!9;UBERON:0000454!3.75e-08!9;UBERON:0002308!5.97e-08!9;UBERON:0000125!5.97e-08!9;UBERON:0000025!1.15e-07!194;UBERON:0000369!1.75e-07!4;UBERON:0002435!1.75e-07!4;UBERON:0000204!1.75e-07!4;UBERON:0010082!1.75e-07!4;UBERON:0009663!5.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.14e-26;2!UBERON:0004801;7.14e-26;2!UBERON:0002037;1.22e-09;6!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6!UBERON:0002680;7.48e-07;9!UBERON:0001895;7.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,9.18e-26,2;UBERON:0004801,9.18e-26,2;UBERON:0002037,1.22e-09,6;UBERON:0006215,1.22e-09,6;UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6;UBERON:0002680,7.48e-07,9;UBERON:0001895,7.48e-07,9;UBERON:0010092,7.48e-07,9 | |||
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| ||
|short_description=p@chr19:13317729..13317738,- | |short_description=p@chr19:13317729..13317738,- | ||
}} | }} |
Latest revision as of 04:04, 26 July 2015
Short description: | p@chr19:13317729..13317738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13317729..13317738, - |
Coexpression cluster: | C586_cerebellum_brain_occipital_middle_parietal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.18e-26 | 2 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 9.18e-26 | 2 |
cervix epithelium | 9.18e-26 | 2 |
cerebellum | 1.22e-09 | 6 |
rhombic lip | 1.22e-09 | 6 |
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
regional part of metencephalon | 7.48e-07 | 9 |
metencephalon | 7.48e-07 | 9 |
future metencephalon | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.60e-11 | 5 |