FFCP PHASE1:Hg19::chr19:13213662..13213686,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4066 | |EntrezGene=4066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6734 | |HGNC=6734 | ||
|TSSclassifier=strong | |||
|UniProt=P12980 | |UniProt=P12980 | ||
|association_with_transcript=0bp_to_ENST00000264824,uc002mwi.2_5end | |association_with_transcript=0bp_to_ENST00000264824,uc002mwi.2_5end | ||
|cluster_id=chr19:13213662..13213686,- | |||
|coexpression_cluster_id=C3755 | |||
|description=CAGE_peak_1_at_LYL1_5end | |description=CAGE_peak_1_at_LYL1_5end | ||
|id=chr19:13213662..13213686,- | |id=chr19:13213662..13213686,- | ||
|ontology_enrichment_celltype=CL:0000037!5.16e-43!172;CL:0000566!5.16e-43!172;CL:0000988!3.48e-42!182;CL:0002032!9.83e-42!165;CL:0000837!9.83e-42!165;CL:0000763!4.80e-39!112;CL:0000049!4.80e-39!112;CL:0000766!6.06e-28!76;CL:0000738!1.17e-27!140;CL:0002031!1.45e-25!124;CL:0000839!2.07e-25!70;CL:0002087!2.89e-25!119;CL:0000557!1.85e-23!71;CL:0002057!3.24e-22!42;CL:0002194!4.35e-22!63;CL:0000576!4.35e-22!63;CL:0000040!4.35e-22!63;CL:0000559!4.35e-22!63;CL:0002009!2.55e-20!65;CL:0000860!7.89e-19!45;CL:0000115!2.05e-14!35;CL:0002139!7.86e-11!24;CL:0000945!9.16e-10!24;CL:0000826!9.16e-10!24;CL:0002078!3.68e-09!44;CL:0000071!4.33e-09!18;CL:0002546!4.33e-09!18;CL:0000236!8.77e-09!14;CL:0000213!3.13e-07!57;CL:0000215!3.13e-07!57;CL:0002393!6.74e-07!9;CL:0002397!6.74e-07!9 | |ontology_enrichment_celltype=CL:0000037!5.16e-43!172;CL:0000566!5.16e-43!172;CL:0000988!3.48e-42!182;CL:0002032!9.83e-42!165;CL:0000837!9.83e-42!165;CL:0000763!4.80e-39!112;CL:0000049!4.80e-39!112;CL:0000766!6.06e-28!76;CL:0000738!1.17e-27!140;CL:0002031!1.45e-25!124;CL:0000839!2.07e-25!70;CL:0002087!2.89e-25!119;CL:0000557!1.85e-23!71;CL:0002057!3.24e-22!42;CL:0002194!4.35e-22!63;CL:0000576!4.35e-22!63;CL:0000040!4.35e-22!63;CL:0000559!4.35e-22!63;CL:0002009!2.55e-20!65;CL:0000860!7.89e-19!45;CL:0000115!2.05e-14!35;CL:0002139!7.86e-11!24;CL:0000945!9.16e-10!24;CL:0000826!9.16e-10!24;CL:0002078!3.68e-09!44;CL:0000071!4.33e-09!18;CL:0002546!4.33e-09!18;CL:0000236!8.77e-09!14;CL:0000213!3.13e-07!57;CL:0000215!3.13e-07!57;CL:0002393!6.74e-07!9;CL:0002397!6.74e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.15e-19;48!CL:0000860;1.05e-18;33!CL:0002057;1.05e-18;33!CL:0000473;2.38e-18;39!CL:0000234;2.38e-18;39!CL:0000763;9.99e-18;100!CL:0000766;1.79e-17;69!CL:0000115;5.09e-15;36!CL:0002139;3.77e-13;24!CL:0000945;5.05e-11;24!CL:0000071;6.30e-11;18!CL:0000236;1.52e-10;13!CL:0002087;3.00e-10;104!CL:0000988;9.27e-10;177!CL:0000738;3.32e-09;136!CL:0002078;1.28e-07;45!CL:1000413;5.15e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.15e-57,168;CL:0002032,2.43e-55,161;CL:0000837,2.43e-55,161;CL:0000988,2.20e-54,177;CL:0000763,1.71e-53,108;CL:0000049,1.71e-53,108;CL:0000766,3.13e-40,72;CL:0000738,9.05e-38,136;CL:0000839,4.88e-37,66;CL:0002031,1.58e-35,120;CL:0000557,5.89e-35,67;CL:0002087,1.14e-34,115;CL:0002194,8.83e-33,59;CL:0000576,8.83e-33,59;CL:0000040,8.83e-33,59;CL:0000559,8.83e-33,59;CL:0002009,7.63e-31,61;CL:0000473,3.81e-30,48;CL:0000234,3.81e-30,48;CL:0000860,3.02e-27,42;CL:0002057,3.02e-27,42;CL:0000115,1.56e-17,36;CL:0002139,4.42e-13,24;CL:0002078,2.99e-11,45;CL:0000945,4.72e-11,24;CL:0000826,4.72e-11,24;CL:0000071,6.43e-11,18;CL:0002546,6.43e-11,18;CL:0000236,1.54e-10,14;CL:0002393,3.37e-08,9;CL:0002397,3.37e-08,9;CL:0000134,1.24e-07,354;CL:0000213,2.03e-07,58;CL:0000215,2.03e-07,58;CL:1000413,5.35e-07,9;CL:0002320,8.77e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-19;42!CL:0000049;1.29e-15;108!CL:0002546;6.30e-11;18 | |||
|ontology_enrichment_disease=DOID:8692!1.12e-14!31;DOID:1240!2.79e-12!39;DOID:2531!4.71e-10!51;DOID:0060083!4.71e-10!51 | |ontology_enrichment_disease=DOID:8692!1.12e-14!31;DOID:1240!2.79e-12!39;DOID:2531!4.71e-10!51;DOID:0060083!4.71e-10!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.60e-16;31!DOID:1240;6.42e-12;39!DOID:2531;8.01e-08;51!DOID:0060083;8.01e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.61e-17,31;DOID:1240,8.10e-15,39;DOID:2531,7.45e-13,51;DOID:0060083,7.45e-13,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.95e-30!112;UBERON:0002390!2.17e-27!102;UBERON:0003061!2.17e-27!102;UBERON:0003081!1.51e-22!216;UBERON:0002405!4.02e-21!115;UBERON:0002371!5.13e-20!80;UBERON:0001474!2.56e-16!86;UBERON:0007023!3.75e-16!115;UBERON:0004765!1.11e-11!101;UBERON:0001434!1.11e-11!101;UBERON:0000178!3.17e-09!15;UBERON:0000179!3.17e-09!15;UBERON:0000463!3.17e-09!15;UBERON:0001986!4.33e-09!18;UBERON:0004638!4.33e-09!18;UBERON:0004852!4.33e-09!18;UBERON:0004535!4.17e-07!110;UBERON:0001009!7.39e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.40e-11;15!UBERON:0000179;4.40e-11;15!UBERON:0000463;4.40e-11;15!UBERON:0004638;6.30e-11;18!UBERON:0001986;6.30e-11;18!UBERON:0004852;6.30e-11;18!UBERON:0000487;1.14e-07;22!UBERON:0002193;4.05e-07;42!UBERON:0003915;5.15e-07;9!UBERON:0004700;5.15e-07;9!UBERON:0001917;5.15e-07;9!UBERON:0002390;6.54e-07;32 | |||
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|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0.491467873003018,6.28021051175185,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,1.60468152070698,0.903106483949403,1.18066171970519,24.388585164632,6.1412703695554,19.5068315378256,0.919421224478927,0.30120591877825,0.739508020333575,6.81711365106654,1.42169232487422,60.1880900636437,13.8498852132969,11.2304890583279,10.4165217943609,18.8088998361536,10.3645973126073,14.9393829227828,46.6728346482403,36.2760905941257,41.7244585243044,17.664606804832,11.5127008646111,12.3882548358041,6.90461741573161,8.19714260893122,11.5876292645407,11.0318617835718,9.03678557017357,18.9597081232078,28.2363509313907,17.4659936037021,19.5509431467224,14.6920268338033,14.7627352455003,12.7867425159808,23.4194423132568,16.5554835825954,24.2948107803636,7.54544020434318,3.97169657283798,4.35975574296902,7.5374599577023,13.5585558789252,12.5969529928968,7.26479403160043,6.62899744777616,7.27863491114034,47.7436947064988,54.4267007910511,46.7538779483678,30.7780449341397,30.3357323539843,13.8224004559489,93.7691926908708,84.7385044868124,65.2111028939743,63.3586480060762,43.1449502897084,39.1384071699964,49.5007058177148,48.4479144313575,37.3589085970414,50.2394103316495,38.1621501814146,20.4916668879401,28.1873850898051,20.6427543187624,19.8256992868539,13.4522055115569,33.4497787664348,0.393419540227666,1.17903228824749,1.85041349099558,1.83905144929746,0.32592226663359,0,0,0.445641827540694,1.76763544484902,2.87994062958707,2.97884250141517,0.896639238079726,1.43065282315866,0.493313713811028,0.552700035571697,1.15921234294021,0.296573126324121,0.267540828089713,0,0.679856056185397,0,1.03088233644789,0.506039384039006,1.91139248594458,1.30216690771284,1.90090408889675,2.25862678616659,1.79181255616186,0,1.89421801635213,0.821127996921047,0.201606743224732,0,0,2.43806866313962,2.68280343881454,0.255725123687061,0,0.50133791063589,0,0,0,0.0945348171640679,0.443458794925128,0.790513071238134,1.76821751921912,0,0,4.86821090482025,5.39802185627728,6.1160661838678,1.43094374583205,1.71598473234038,0.371457501329565,9.34183314623514,17.2046919021225,20.4812895948481,7.34900324501212,13.423981958717,23.6601516068458,20.6905016871442,11.3703374034505,7.1153252537342,4.68608857870538,8.45941565929209,10.6438094800592,5.6134273236079,8.45625084795498,34.0259618110339,2.67899184852239,4.04152870727106,3.49095589498299,18.397996495906,12.3404535743857,15.9385517219454,5.27121669744253,3.87780264148325,0,0.496971951695318,0.25326102332916,0,0,0.354668382198357,0,4.2699598291882,0.98667019366864,0,1.34710672069688,0.980771418680752,0.151357427644931,0,0.468642863667593,0,2.2818872861778,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.491337269247072,0.206651562351531,0,0,0,1.43723628363248,0.505008341862199,0,0.277064115484183,0.438977620880838,0,0.300476117813194,1.58805056424029,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0,0,0.323292113637624,0,0.403008392910561,0.67824236924195,0.386521706326594,0,0,0,0.397589304964456,0.464775771478074,0.207322110030741,0.756962552626885,0.36497735907583,0,0,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,9.59602091012043,7.01208869017229,0,1.47008711385542,2.53510069643662,0.982827216677626,1.77236972004421,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,1.62904152655162,2.07986957055916,0,0.695582429850461,0.117408694235822,3.89789408954899,7.40776820122577,2.09279567458058,0,0,15.2654543774186,4.91408956792399,16.6466901763376,0.93733833986777,0,0.283550194484773,0,0,0,12.3165809473986,33.8105986610788,13.0616712790686,14.844355201947,14.3916374106073,0.253991577168676,2.67391897890794,1.17217447210047,1.71072446022705,0.616964956219941,1.50171528921959,0.857479297891735,0,0,0,0.258543431515556,0,1.690605505112,0,1.04007436911366,0.257207374262142,0,0.799266537048298,0,2.71310802695722,0.823240336780769,0,0.710783897485092,0.791951872933429,0.301439377059586,0,0.599837947092342,12.162378064119,11.5519131029389,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0,0,0.394061520403854,0.215627574859517,1.28343036279748,0,0,0,0.335032530668698,0,7.49007023947182,14.9580729602012,3.31532410748828,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,7.44364894042395,11.2171384425681,7.79111171965144,0.303127571446259,0,0.30239029332968,0,0.460385919864187,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0.483437798366489,0,0,0,0,0.131124414959424,0.902399225814824,0.308061348417659,2.35304930753057,0,0,12.5106722477986,19.7308698120758,5.39789790255348,13.880452742126,0.812839312631559,0.501689773854853,0,0,0.447749509444357,5.48149691614836,10.9802889430458,0.769350375349168,0.656029291399411,0.650756789328606,2.88514832613622,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,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| ||
|short_description=p1@LYL1 | |short_description=p1@LYL1 | ||
}} | }} |
Latest revision as of 00:09, 16 September 2015
Short description: | p1@LYL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYL1_5end |
Coexpression cluster: | C3755_CD14CD16_acute_CD19_granulocyte_CD133_CD14_Whole |
Association with transcript: | 0bp_to_ENST00000264824, uc002mwi.2_5end |
EntrezGene: | LYL1 |
HGNC: | 6734 |
UniProt: | P12980 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.35e-43 | 108 |
hematopoietic system | 7.81e-40 | 98 |
blood island | 7.81e-40 | 98 |
immune system | 5.42e-33 | 93 |
bone marrow | 2.83e-30 | 76 |
lateral plate mesoderm | 2.45e-29 | 203 |
bone element | 5.96e-26 | 82 |
skeletal element | 3.44e-21 | 90 |
skeletal system | 1.79e-16 | 100 |
adult organism | 3.62e-15 | 114 |
blood | 4.37e-11 | 15 |
haemolymphatic fluid | 4.37e-11 | 15 |
organism substance | 4.37e-11 | 15 |
blood vessel endothelium | 6.43e-11 | 18 |
endothelium | 6.43e-11 | 18 |
cardiovascular system endothelium | 6.43e-11 | 18 |
mesoderm | 1.96e-08 | 315 |
mesoderm-derived structure | 1.96e-08 | 315 |
presumptive mesoderm | 1.96e-08 | 315 |
simple squamous epithelium | 1.16e-07 | 22 |
endothelial tube | 5.35e-07 | 9 |
arterial system endothelium | 5.35e-07 | 9 |
endothelium of artery | 5.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.61e-17 | 31 |
leukemia | 8.10e-15 | 39 |
hematologic cancer | 7.45e-13 | 51 |
immune system cancer | 7.45e-13 | 51 |