FFCP PHASE1:Hg19::chr19:12992274..12992332,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1777 | |EntrezGene=1777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2960 | |HGNC=2960 | ||
|TSSclassifier=strong | |||
|UniProt=O00115 | |UniProt=O00115 | ||
|association_with_transcript=2bp_to_ENST00000222219,NM_001375,uc002mvn.1,uc010xmr.1_5end | |association_with_transcript=2bp_to_ENST00000222219,NM_001375,uc002mvn.1,uc010xmr.1_5end | ||
|cluster_id=chr19:12992274..12992332,- | |||
|description=CAGE_peak_1_at_DNASE2_5end | |description=CAGE_peak_1_at_DNASE2_5end | ||
|id=chr19:12992274..12992332,- | |id=chr19:12992274..12992332,- | ||
|ontology_enrichment_celltype=CL:0000055!4.57e-12!180;CL:0000325!1.47e-09!39;CL:0000222!7.94e-09!119;CL:0000066!1.74e-08!254;CL:0002321!6.44e-08!248;CL:0000220!6.75e-08!246;CL:0000136!7.87e-08!15 | |ontology_enrichment_celltype=CL:0000055!4.57e-12!180;CL:0000325!1.47e-09!39;CL:0000222!7.94e-09!119;CL:0000066!1.74e-08!254;CL:0002321!6.44e-08!248;CL:0000220!6.75e-08!246;CL:0000136!7.87e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.59e-08;19!CL:0000136;2.26e-07;13!CL:0000134;2.98e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.44e-09,121;CL:0000066,1.96e-08,253;CL:0002321,3.84e-08,250;CL:0000349,5.73e-08,19;CL:0000136,7.87e-08,15;CL:0002078,7.40e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.63e-08!118;UBERON:0000055!9.10e-08!69;UBERON:0002049!9.50e-08!79;UBERON:0007798!9.50e-08!79;UBERON:0004872!1.04e-07!84;UBERON:0005631!1.08e-07!14;UBERON:0000158!1.08e-07!14;UBERON:0001637!2.76e-07!42;UBERON:0003509!2.76e-07!42;UBERON:0004572!2.76e-07!42;UBERON:0009569!6.77e-07!113 | |ontology_enrichment_uberon=UBERON:0003914!3.63e-08!118;UBERON:0000055!9.10e-08!69;UBERON:0002049!9.50e-08!79;UBERON:0007798!9.50e-08!79;UBERON:0004872!1.04e-07!84;UBERON:0005631!1.08e-07!14;UBERON:0000158!1.08e-07!14;UBERON:0001637!2.76e-07!42;UBERON:0003509!2.76e-07!42;UBERON:0004572!2.76e-07!42;UBERON:0009569!6.77e-07!113 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.16e-08,117;UBERON:0005631,1.08e-07,14;UBERON:0000158,1.08e-07,14;UBERON:0000055,1.46e-07,68;UBERON:0002049,1.51e-07,78;UBERON:0007798,1.51e-07,78;UBERON:0004872,1.64e-07,83;UBERON:0001637,2.76e-07,42;UBERON:0003509,2.76e-07,42;UBERON:0004572,2.76e-07,42 | |||
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| ||
|short_description=p1@DNASE2 | |short_description=p1@DNASE2 | ||
}} | }} |
Latest revision as of 21:43, 15 September 2015
Short description: | p1@DNASE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNASE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000222219, NM_001375, uc002mvn.1, uc010xmr.1_5end |
EntrezGene: | DNASE2 |
HGNC: | 2960 |
UniProt: | O00115 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.44e-09 | 121 |
epithelial cell | 1.96e-08 | 253 |
embryonic cell | 3.84e-08 | 250 |
extraembryonic cell | 5.73e-08 | 19 |
fat cell | 7.87e-08 | 15 |
meso-epithelial cell | 7.40e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 4.16e-08 | 117 |
extraembryonic membrane | 1.08e-07 | 14 |
membranous layer | 1.08e-07 | 14 |
vessel | 1.46e-07 | 68 |
vasculature | 1.51e-07 | 78 |
vascular system | 1.51e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 1.64e-07 | 83 |
artery | 2.76e-07 | 42 |
arterial blood vessel | 2.76e-07 | 42 |
arterial system | 2.76e-07 | 42 |