FFCP PHASE1:Hg19::chr2:33359687..33359717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4052 | |EntrezGene=4052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |HGNC=6714 | ||
|TSSclassifier=strong | |||
|UniProt=C9JD84 | |UniProt=C9JD84 | ||
|association_with_transcript=0bp_to_ENST00000402934,ENST00000404525_5end | |association_with_transcript=0bp_to_ENST00000402934,ENST00000404525_5end | ||
|cluster_id=chr2:33359687..33359717,+ | |||
|coexpression_cluster_id=C2697 | |||
|description=CAGE_peak_2_at_LTBP1_5end | |description=CAGE_peak_2_at_LTBP1_5end | ||
|id=chr2:33359687..33359717,+ | |id=chr2:33359687..33359717,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.60e-43!180;CL:0000680!5.53e-24!57;CL:0000056!5.53e-24!57;CL:0000355!5.53e-24!57;CL:0000057!9.60e-23!75;CL:0000187!1.17e-22!54;CL:0000183!2.60e-21!59;CL:0000192!1.34e-18!42;CL:0000514!1.34e-18!42;CL:0000393!1.43e-18!60;CL:0000211!1.43e-18!60;CL:0000359!4.02e-15!32;CL:0002620!6.62e-09!23;CL:0000222!3.35e-07!119 | |ontology_enrichment_celltype=CL:0000055!8.60e-43!180;CL:0000680!5.53e-24!57;CL:0000056!5.53e-24!57;CL:0000355!5.53e-24!57;CL:0000057!9.60e-23!75;CL:0000187!1.17e-22!54;CL:0000183!2.60e-21!59;CL:0000192!1.34e-18!42;CL:0000514!1.34e-18!42;CL:0000393!1.43e-18!60;CL:0000211!1.43e-18!60;CL:0000359!4.02e-15!32;CL:0002620!6.62e-09!23;CL:0000222!3.35e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.90e-15;32!CL:0000192;7.63e-15;43!CL:0000187;2.51e-13;55!CL:0000393;4.40e-11;61!CL:0000211;4.40e-11;61!CL:0000057;3.36e-10;73!CL:0002620;2.21e-09;23!CL:0002539;8.68e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.36e-26,58;CL:0000056,9.36e-26,58;CL:0000355,9.36e-26,58;CL:0000187,2.35e-24,55;CL:0000057,1.10e-23,76;CL:0000393,2.45e-20,61;CL:0000211,2.45e-20,61;CL:0000192,4.43e-20,43;CL:0000514,4.43e-20,43;CL:0000359,8.08e-16,32;CL:0002620,2.30e-09,23;CL:0000222,1.64e-07,121;CL:0002539,8.65e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;7.63e-15;43!CL:0000355;1.60e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.86e-33!83;UBERON:0002329!5.86e-33!83;UBERON:0003077!5.86e-33!83;UBERON:0003059!5.86e-33!83;UBERON:0007282!5.86e-33!83;UBERON:0009618!5.86e-33!83;UBERON:0007285!5.86e-33!83;UBERON:0004290!2.07e-28!70;UBERON:0002385!3.94e-24!63;UBERON:0001015!3.94e-24!63;UBERON:0000383!3.94e-24!63;UBERON:0001134!4.17e-24!61;UBERON:0002036!4.17e-24!61;UBERON:0003082!4.17e-24!61;UBERON:0000475!7.04e-23!365;UBERON:0000486!5.10e-21!82;UBERON:0005256!2.79e-19!143;UBERON:0000481!5.78e-18!347;UBERON:0000119!3.69e-17!312;UBERON:0001009!1.04e-16!113;UBERON:0004535!1.91e-16!110;UBERON:0000483!2.68e-16!309;UBERON:0000468!1.19e-15!659;UBERON:0004872!4.26e-15!84;UBERON:0001637!2.42e-14!42;UBERON:0003509!2.42e-14!42;UBERON:0004572!2.42e-14!42;UBERON:0002049!3.87e-14!79;UBERON:0007798!3.87e-14!79;UBERON:0004573!4.30e-13!33;UBERON:0004571!4.30e-13!33;UBERON:0000467!5.03e-13!625;UBERON:0003102!5.20e-13!95;UBERON:0000480!8.44e-13!626;UBERON:0001981!3.15e-12!60;UBERON:0007500!3.15e-12!60;UBERON:0004537!3.15e-12!60;UBERON:0006965!3.15e-12!60;UBERON:0000477!3.57e-12!286;UBERON:0000490!7.21e-12!138;UBERON:0000055!4.38e-11!69;UBERON:0002100!9.73e-11!216;UBERON:0004111!1.58e-10!241;UBERON:0000479!2.67e-10!787;UBERON:0002050!8.25e-10!605;UBERON:0005423!8.25e-10!605;UBERON:0000923!8.66e-10!604;UBERON:0005291!8.66e-10!604;UBERON:0006598!8.66e-10!604;UBERON:0002532!8.66e-10!604;UBERON:0002199!1.74e-09!45;UBERON:0002416!1.74e-09!45;UBERON:0000922!2.86e-09!612;UBERON:0003104!4.12e-09!238;UBERON:0009142!4.12e-09!238;UBERON:0000025!6.86e-09!194;UBERON:0003914!7.18e-09!118;UBERON:0002097!3.00e-08!40;UBERON:0007100!3.46e-08!27;UBERON:0000948!3.99e-08!24;UBERON:0005498!3.99e-08!24;UBERON:0004140!3.99e-08!24;UBERON:0009881!3.99e-08!24;UBERON:0004141!3.99e-08!24;UBERON:0003084!3.99e-08!24;UBERON:0007005!3.99e-08!24;UBERON:0004139!3.99e-08!24;UBERON:0004291!3.99e-08!24;UBERON:0007023!6.08e-08!115;UBERON:0000033!1.39e-07!123;UBERON:0000947!1.55e-07!21;UBERON:0010191!1.55e-07!21;UBERON:0000153!3.19e-07!129;UBERON:0007811!3.19e-07!129;UBERON:0001135!5.73e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.82e-12;33!UBERON:0004571;3.82e-12;33!UBERON:0002385;7.05e-12;31!UBERON:0001015;7.05e-12;31!UBERON:0000383;7.05e-12;31!UBERON:0001637;1.39e-10;42!UBERON:0003509;1.39e-10;42!UBERON:0004572;1.39e-10;42!UBERON:0002204;4.59e-09;70!UBERON:0007100;9.86e-08;25!UBERON:0000948;1.14e-07;22!UBERON:0000947;1.43e-07;21!UBERON:0010191;1.43e-07;21!UBERON:0000075;1.59e-07;16!UBERON:0001135;3.22e-07;15!UBERON:0002097;5.80e-07;41!UBERON:0002384;7.09e-07;198!UBERON:0002199;8.15e-07;46!UBERON:0002416;8.15e-07;46!UBERON:0004237;8.68e-07;10!UBERON:0004695;8.68e-07;10!UBERON:0002111;8.68e-07;10!UBERON:0004178;8.68e-07;10 | |||
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| ||
|short_description=p2@LTBP1 | |short_description=p2@LTBP1 | ||
}} | }} |
Latest revision as of 23:41, 16 September 2015
Short description: | p2@LTBP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LTBP1_5end |
Coexpression cluster: | C2697_Chondrocyte_mesenchymal_Fibroblast_Smooth_Anulus_hepatic_aorta |
Association with transcript: | 0bp_to_ENST00000402934, ENST00000404525_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | C9JD84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.36e-26 | 58 |
myoblast | 9.36e-26 | 58 |
multi-potent skeletal muscle stem cell | 9.36e-26 | 58 |
muscle cell | 2.35e-24 | 55 |
fibroblast | 1.10e-23 | 76 |
electrically responsive cell | 2.45e-20 | 61 |
electrically active cell | 2.45e-20 | 61 |
smooth muscle cell | 4.43e-20 | 43 |
smooth muscle myoblast | 4.43e-20 | 43 |
vascular associated smooth muscle cell | 8.08e-16 | 32 |
skin fibroblast | 2.30e-09 | 23 |
mesodermal cell | 1.64e-07 | 121 |
aortic smooth muscle cell | 8.65e-07 | 10 |