FFCP PHASE1:Hg19::chr2:30482284..30482291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:30482284..30482291,+ | |||
|coexpression_cluster_id=C4220 | |||
|description=CAGE_peak_at_chr2:30482284..30482291,+ | |description=CAGE_peak_at_chr2:30482284..30482291,+ | ||
|id=chr2:30482284..30482291,+ | |id=chr2:30482284..30482291,+ | ||
|ontology_enrichment_celltype=CL:0002620!3.59e-08!23;CL:0000057!8.89e-07!75 | |ontology_enrichment_celltype=CL:0002620!3.59e-08!23;CL:0000057!8.89e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002580;4.11e-20;3!CL:0002334;4.35e-19;12!CL:0002617;5.25e-14;2!CL:0000136;9.42e-13;13!CL:0002615;4.01e-10;3!CL:0002579;7.14e-10;3!CL:0002616;3.31e-08;1!CL:0002581;1.14e-07;1!CL:0002620;7.54e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.44e-20,3;CL:0002334,2.74e-19,12;CL:0000136,1.70e-15,15;CL:0002617,2.46e-14,2;CL:0002615,4.02e-10,3;CL:0000057,5.53e-10,76;CL:0002579,7.47e-10,3;CL:0002616,3.10e-08,1;CL:0002581,6.97e-08,1;CL:0002620,8.53e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,9.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!8.31e-08!6;UBERON:0002358!8.31e-08!6;UBERON:0003684!8.31e-08!6;UBERON:0001178!8.31e-08!6;UBERON:0004457!2.25e-07!12;UBERON:0000042!2.25e-07!12;UBERON:0004923!3.93e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.77e-18;6!UBERON:0002358;2.77e-18;6!UBERON:0003684;2.77e-18;6!UBERON:0001178;2.77e-18;6!UBERON:0000310;4.16e-16;10!UBERON:0001443;1.25e-14;11!UBERON:0005406;3.54e-14;2!UBERON:0004457;3.06e-12;9!UBERON:0000042;3.06e-12;9!UBERON:0002171;4.98e-08;1!UBERON:0006518;4.98e-08;1!UBERON:0008949;4.98e-08;1!UBERON:0000101;4.98e-08;1!UBERON:0002167;4.98e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.91e-18,6;UBERON:0002358,2.91e-18,6;UBERON:0003684,2.91e-18,6;UBERON:0001178,2.91e-18,6;UBERON:0000310,2.23e-16,10;UBERON:0001443,7.14e-15,11;UBERON:0005406,2.02e-14,2;UBERON:0004457,3.39e-09,12;UBERON:0000042,3.39e-09,12;UBERON:0002171,5.33e-08,1;UBERON:0006518,5.33e-08,1;UBERON:0008949,5.33e-08,1;UBERON:0000101,5.33e-08,1;UBERON:0002167,5.33e-08,1;UBERON:0002097,7.49e-07,41 | |||
|phase1_expression=1.63510541343501,2.99740733447376,0.986680828671798,7.00513088471913,3.12872766099101,4.36169262050184,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0.0764134057479513,0,0.236132343941038,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0.25618263945135,0.260118695119756,0.822189523018381,0.276350017785848,0.869409257205157,0.444859689486181,0.267540828089713,0,0,0.383220493601921,1.03088233644789,0,0.95569624297229,0,0,0.451725357233318,0.511946444617674,0,0,0,0.604820229674197,0,0.144824403882799,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.573673241497627,0.709336764396714,0,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.340296549480063,0.358779271377724,2.13557388818567,0.423863802319124,0,0.412210116953756,2.06112432036503,1.11670113798954,0.168776332241266,0.584622030967192,0.504867548488229,1.10459878370759,0,0.710019185033229,1.20902517873168,0.169560592310488,0,0,0,0.121973706129595,0,0.348581828608555,0,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06375246633948,4.16029747645464,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,1.24053903909388,1.38115775959256,4.2099014164961,0.768834895534206,2.04682899626681,2.89537058058494,1.48418066444991,0,0.177561725313127,0,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.786746489756545,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0.996239941255349,0,0,0.20453736500431,0.123084805461069,1.24415835064723,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.457987967009312,0.533034776018635,0,0.156980256395025,0.332423363800313,0.225595660617181,0,0,0,0,0,0,0.282706142867882,0,0,0,1.22206028986725,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0,2.41981432097328,0.61214552326098,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0.418411385249333,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0,0,0,0,0.268733889946905,0.720599767084807,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,2.07119527673598,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0.33946505990805,1.2754495206101,0,1.11728983594649,0,0,0,0,5.2061731150044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0.40341013740704,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0.496211178389294,0.527613733078862,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.156986185701028,0,0,0.9131587205094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| |phase1_expression=1.63510541343501,2.99740733447376,0.986680828671798,7.00513088471913,3.12872766099101,4.36169262050184,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0.0764134057479513,0,0.236132343941038,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0.25618263945135,0.260118695119756,0.822189523018381,0.276350017785848,0.869409257205157,0.444859689486181,0.267540828089713,0,0,0.383220493601921,1.03088233644789,0,0.95569624297229,0,0,0.451725357233318,0.511946444617674,0,0,0,0.604820229674197,0,0.144824403882799,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.573673241497627,0.709336764396714,0,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.340296549480063,0.358779271377724,2.13557388818567,0.423863802319124,0,0.412210116953756,2.06112432036503,1.11670113798954,0.168776332241266,0.584622030967192,0.504867548488229,1.10459878370759,0,0.710019185033229,1.20902517873168,0.169560592310488,0,0,0,0.121973706129595,0,0.348581828608555,0,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06375246633948,4.16029747645464,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,1.24053903909388,1.38115775959256,4.2099014164961,0.768834895534206,2.04682899626681,2.89537058058494,1.48418066444991,0,0.177561725313127,0,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.786746489756545,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0.996239941255349,0,0,0.20453736500431,0.123084805461069,1.24415835064723,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.457987967009312,0.533034776018635,0,0.156980256395025,0.332423363800313,0.225595660617181,0,0,0,0,0,0,0.282706142867882,0,0,0,1.22206028986725,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0,2.41981432097328,0.61214552326098,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0.418411385249333,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0,0,0,0,0.268733889946905,0.720599767084807,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,2.07119527673598,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0,0.39997479170986,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0.33946505990805,1.2754495206101,0,1.11728983594649,0,0,0,0,5.2061731150044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0.40341013740704,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0.496211178389294,0.527613733078862,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.156986185701028,0,0,0.9131587205094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| ||
|short_description=p@chr2:30482284..30482291,+ | |short_description=p@chr2:30482284..30482291,+ | ||
}} | }} |
Latest revision as of 09:32, 29 July 2015
Short description: | p@chr2:30482284..30482291, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:30482284..30482291, + |
Coexpression cluster: | C4220_Adipocyte_Preadipocyte_normal_Mesenchymal_tenocyte_penis_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.44e-20 | 3 |
preadipocyte | 2.74e-19 | 12 |
fat cell | 1.70e-15 | 15 |
adipocyte of breast | 2.46e-14 | 2 |
adipocyte of omentum tissue | 4.02e-10 | 3 |
fibroblast | 5.53e-10 | 76 |
omentum preadipocyte | 7.47e-10 | 3 |
perirenal adipocyte cell | 3.10e-08 | 1 |
perirenal preadipocyte | 6.97e-08 | 1 |
skin fibroblast | 8.53e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.91e-18 | 6 |
peritoneum | 2.91e-18 | 6 |
abdominal cavity | 2.91e-18 | 6 |
visceral peritoneum | 2.91e-18 | 6 |
breast | 2.23e-16 | 10 |
chest | 7.14e-15 | 11 |
perirenal fat | 2.02e-14 | 2 |
cavity lining | 3.39e-09 | 12 |
serous membrane | 3.39e-09 | 12 |
lower lobe of right lung | 5.33e-08 | 1 |
right lung lobe | 5.33e-08 | 1 |
lower lobe of lung | 5.33e-08 | 1 |
lobe of lung | 5.33e-08 | 1 |
right lung | 5.33e-08 | 1 |
skin of body | 7.49e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.10e-08 | 1 |