FFCP PHASE1:Hg19::chr2:27712699..27712706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26160 | |EntrezGene=26160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30391 | |HGNC=30391 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ56 | |UniProt=F5GZ56 | ||
|association_with_transcript=-43bp_to_ENST00000416524_5end | |association_with_transcript=-43bp_to_ENST00000416524_5end | ||
|cluster_id=chr2:27712699..27712706,- | |||
|description=CAGE_peak_4_at_IFT172_5end | |description=CAGE_peak_4_at_IFT172_5end | ||
|id=chr2:27712699..27712706,- | |id=chr2:27712699..27712706,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;4.76e-13;1!CL:0000222;4.76e-13;1!CL:0000557;4.76e-13;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.76e-13;1!UBERON:0010122;3.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.42e-18!115;UBERON:0001049!2.62e-15!57;UBERON:0005068!2.62e-15!57;UBERON:0006241!2.62e-15!57;UBERON:0007135!2.62e-15!57;UBERON:0003075!9.89e-14!86;UBERON:0007284!9.89e-14!86;UBERON:0000073!1.31e-13!94;UBERON:0001016!1.31e-13!94;UBERON:0002616!4.75e-13!59;UBERON:0002346!7.25e-13!90;UBERON:0005743!7.23e-11!86;UBERON:0000955!1.40e-10!69;UBERON:0006238!1.40e-10!69;UBERON:0001017!1.49e-10!82;UBERON:0002780!1.65e-10!41;UBERON:0001890!1.65e-10!41;UBERON:0006240!1.65e-10!41;UBERON:0003080!5.02e-10!42;UBERON:0004121!2.68e-09!169;UBERON:0000924!6.37e-09!173;UBERON:0006601!6.37e-09!173;UBERON:0001893!1.21e-08!34;UBERON:0002020!1.50e-08!34;UBERON:0003528!1.50e-08!34;UBERON:0002791!4.32e-08!33;UBERON:0003056!7.09e-08!61;UBERON:0001869!1.64e-07!32;UBERON:0000033!4.70e-07!123;UBERON:0003076!7.19e-07!15;UBERON:0003057!7.19e-07!15;UBERON:0000153!9.01e-07!129;UBERON:0007811!9.01e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;1.19e-14;13!UBERON:0006834;4.76e-13;1!UBERON:0000941;4.76e-13;1!UBERON:0001785;4.76e-13;1!UBERON:0002464;4.76e-13;1!UBERON:0004904;4.76e-13;1!UBERON:0001021;4.76e-13;1!UBERON:0004733;2.32e-09;12!UBERON:0002028;2.32e-09;12!UBERON:0002298;9.62e-09;6!UBERON:0001897;3.69e-07;2!UBERON:0001873;3.69e-07;2!UBERON:0002148;3.69e-07;2!UBERON:0003714;3.69e-07;2!UBERON:0005162;3.69e-07;2!UBERON:0000122;3.69e-07;2!UBERON:0006331;3.69e-07;2!UBERON:0009662;3.69e-07;2!UBERON:0010225;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004732,1.04e-14,13;UBERON:0000941,4.23e-13,1;UBERON:0001785,4.23e-13,1;UBERON:0002464,4.23e-13,1;UBERON:0004904,4.23e-13,1;UBERON:0001021,4.23e-13,1;UBERON:0003902,4.23e-13,1;UBERON:0005425,4.23e-13,1;UBERON:0003076,7.25e-13,15;UBERON:0003057,7.25e-13,15;UBERON:0006834,9.73e-13,1;UBERON:0004733,2.13e-09,12;UBERON:0002028,2.13e-09,12;UBERON:0007277,2.13e-09,12;UBERON:0002298,9.63e-09,6;UBERON:0001016,2.17e-07,89;UBERON:0001873,2.58e-07,2;UBERON:0010122,2.58e-07,2;UBERON:0001897,2.91e-07,2;UBERON:0010225,2.91e-07,2;UBERON:0007023,2.95e-07,114;UBERON:0003714,3.48e-07,2;UBERON:0005162,3.48e-07,2;UBERON:0000122,3.48e-07,2;UBERON:0001049,3.99e-07,56;UBERON:0005068,3.99e-07,56;UBERON:0006241,3.99e-07,56;UBERON:0007135,3.99e-07,56;UBERON:0002148,4.98e-07,2;UBERON:0006331,4.98e-07,2;UBERON:0009662,4.98e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0.71153252537342,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,1.43418310374407,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.877955241761676,0,0,0,0.358779271377724,0,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0.508681776931463,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.288239906833923,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.1466765716419,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0,0,0,0.0920809889358963,0.114814448164607,0.546273504020151,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0.537101224341368,0.290033387828457,0,0.267096106940212,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0.66614393599564,0,0,0,0.36408156524854,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.333926115068718,0,1.26675244876796,0.398495976502139,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,0.120596438625408,1.52581736317083,0.221158519862449,0,0.219385397153973,0,0,0.692552326534174,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0.166211681900156,0,0.392125068635479,0.167821586975843,0,0,0.210998064528027,0,0.141353071433941,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.67401132980677,0.802577647298789,0.468528891450678,0.364909578431332,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.189559738885464,0,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0,0.193978032976839,0,0.225980740780532,0,0,0.316553979779393,0,0.400794101257669,0,0,0,0.114536596165916,0,0.288109595976299,0.124252535565433,0,0,0.104602846312333,0,0,0,0.821432273351958,1.27746588066972,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0.403100834920358,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,0,0,0.275078873194468,0,0,0,0.425246896606173,0,0.0788057072991982,0.314727528809989,0,0,0.191915197319445,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,1.16354660725395,0.26446520348538,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0.655745261419609,0.314108192500469,0,0,0.3755727921195,1.72022758707021,0.554645257684261,0.931446044120752,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0.761610424337591,0.813741466409323,0,0.107410557042488,0.928067519756987,0,0.400027764663154,0.343395705182793,0,1.26184898228651,0,0.643324774124777,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0.255788742607303,2.04867141653695,0.314531883711793,0.109209638192014,0,0,0.123935764259002,0,0.318004350653419,0.15772349000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| 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| ||
|short_description=p4@IFT172 | |short_description=p4@IFT172 | ||
}} | }} |
Latest revision as of 17:38, 16 September 2015
Short description: | p4@IFT172 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFT172_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000416524_5end |
EntrezGene: | IFT172 |
HGNC: | 30391 |
UniProt: | F5GZ56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of nervous system | 1.04e-14 | 13 |
cranial nerve II | 4.23e-13 | 1 |
cranial nerve | 4.23e-13 | 1 |
nerve trunk | 4.23e-13 | 1 |
nerve connecting eye with brain | 4.23e-13 | 1 |
nerve | 4.23e-13 | 1 |
retinal neural layer | 4.23e-13 | 1 |
presumptive neural retina | 4.23e-13 | 1 |
posterior neural tube | 7.25e-13 | 15 |
chordal neural plate | 7.25e-13 | 15 |
uterus or analog | 9.73e-13 | 1 |
segmental subdivision of hindbrain | 2.13e-09 | 12 |
hindbrain | 2.13e-09 | 12 |
presumptive hindbrain | 2.13e-09 | 12 |
brainstem | 9.63e-09 | 6 |
nervous system | 2.17e-07 | 89 |
caudate nucleus | 2.58e-07 | 2 |
future caudate nucleus | 2.58e-07 | 2 |
dorsal plus ventral thalamus | 2.91e-07 | 2 |
thalamic complex | 2.91e-07 | 2 |
adult organism | 2.95e-07 | 114 |
neural tissue | 3.48e-07 | 2 |
multi cell component structure | 3.48e-07 | 2 |
neuron projection bundle | 3.48e-07 | 2 |
neural tube | 3.99e-07 | 56 |
neural rod | 3.99e-07 | 56 |
future spinal cord | 3.99e-07 | 56 |
neural keel | 3.99e-07 | 56 |
locus ceruleus | 4.98e-07 | 2 |
brainstem nucleus | 4.98e-07 | 2 |
hindbrain nucleus | 4.98e-07 | 2 |