FFCP PHASE1:Hg19::chr12:113623378..113623400,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:113623378..113623400,+
|short_description=p4@C12orf52
|description=CAGE_peak_4_at_C12orf52_5end
|association_with_transcript=13bp_to_ENST00000436053_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84934 | |EntrezGene=84934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25925 | |HGNC=25925 | ||
|TSSclassifier=strong | |||
|UniProt=Q96K30 | |UniProt=Q96K30 | ||
|association_with_transcript=13bp_to_ENST00000436053_5end | |||
|cluster_id=chr12:113623378..113623400,+ | |||
|description=CAGE_peak_4_at_C12orf52_5end | |||
|id=chr12:113623378..113623400,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.00e-39!254;CL:0002321!1.13e-15!248;CL:0000220!2.73e-15!246;CL:0000076!2.41e-13!62;CL:0000548!6.44e-12!679;CL:0000004!6.44e-12!679;CL:0000255!6.44e-12!679;CL:0000012!1.47e-11!682;CL:0000223!7.05e-10!59;CL:0000063!1.31e-09!578;CL:0002076!9.16e-08!43;CL:0000077!9.31e-08!19;CL:0000213!4.37e-07!57;CL:0000215!4.37e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.27e-07;19!CL:1000449;6.71e-07;15!CL:0000076;6.75e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-40,253;CL:0002321,3.48e-15,250;CL:0000076,1.03e-13,63;CL:0000223,5.64e-10,58;CL:0000077,5.58e-08,19;CL:0002076,1.66e-07,42;CL:0000213,2.19e-07,58;CL:0000215,2.19e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.09e-27!239;DOID:162!1.18e-27!235;DOID:305!6.92e-21!106;DOID:0050687!3.74e-19!143;DOID:0050686!2.85e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:305;6.14e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.08e-27,235;DOID:14566,8.84e-27,239;DOID:305,3.76e-21,106;DOID:0050687,9.11e-19,143;DOID:0050686,6.25e-11,137 | |||
|ontology_enrichment_uberon=UBERON:0001048!4.42e-10!168;UBERON:0003104!1.28e-08!238;UBERON:0009142!1.28e-08!238;UBERON:0005177!3.98e-08!107;UBERON:0001041!1.51e-07!98;UBERON:0004119!1.68e-07!169;UBERON:0000925!1.68e-07!169;UBERON:0006595!1.68e-07!169;UBERON:0000063!1.91e-07!97;UBERON:0009569!2.73e-07!113;UBERON:0001737!3.75e-07!9;UBERON:0000481!4.31e-07!347;UBERON:0000072!5.76e-07!46;UBERON:0008947!7.89e-07!38;UBERON:0003258!7.89e-07!38;UBERON:0000466!8.45e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;3.62e-08;37!UBERON:0001737;1.81e-07;9!UBERON:0001557;1.81e-07;9!UBERON:0000353;5.35e-07;15!UBERON:0002113;6.00e-07;24!UBERON:0011143;6.00e-07;24!UBERON:0006555;6.71e-07;15!UBERON:0004819;6.71e-07;15!UBERON:0001285;6.71e-07;15!UBERON:0007684;6.71e-07;15!UBERON:0006554;6.93e-07;30!UBERON:0001008;6.93e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.78e-10,101;UBERON:0001048,3.28e-08,160;UBERON:0002100,3.41e-08,199;UBERON:0009569,1.06e-07,112;UBERON:0001737,2.36e-07,9;UBERON:0008947,2.92e-07,38;UBERON:0003258,2.92e-07,38;UBERON:0005172,7.77e-07,54;UBERON:0005173,7.77e-07,54 | |||
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| ||
|short_description=p4@C12orf52 | |||
}} | }} |
Latest revision as of 12:15, 16 September 2015
Short description: | p4@C12orf52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C12orf52_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000436053_5end |
EntrezGene: | C12orf52 |
HGNC: | 25925 |
UniProt: | Q96K30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.92e-40 | 253 |
embryonic cell | 3.48e-15 | 250 |
squamous epithelial cell | 1.03e-13 | 63 |
endodermal cell | 5.64e-10 | 58 |
mesothelial cell | 5.58e-08 | 19 |
endo-epithelial cell | 1.66e-07 | 42 |
lining cell | 2.19e-07 | 58 |
barrier cell | 2.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.78e-10 | 101 |
primordium | 3.28e-08 | 160 |
trunk | 3.41e-08 | 199 |
subdivision of trunk | 1.06e-07 | 112 |
larynx | 2.36e-07 | 9 |
respiratory primordium | 2.92e-07 | 38 |
endoderm of foregut | 2.92e-07 | 38 |
abdomen element | 7.77e-07 | 54 |
abdominal segment element | 7.77e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.08e-27 | 235 |
disease of cellular proliferation | 8.84e-27 | 239 |
carcinoma | 3.76e-21 | 106 |
cell type cancer | 9.11e-19 | 143 |
organ system cancer | 6.25e-11 | 137 |