FFCP PHASE1:Hg19::chr18:6729698..6729724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79822 | |EntrezGene=79822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25509 | |HGNC=25509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-96bp_to_ENST00000400091_5end | |association_with_transcript=-96bp_to_ENST00000400091_5end | ||
|cluster_id=chr18:6729698..6729724,+ | |||
|coexpression_cluster_id=C3738 | |||
|description=CAGE_peak_1_at_ARHGAP28_5end | |description=CAGE_peak_1_at_ARHGAP28_5end | ||
|id=chr18:6729698..6729724,+ | |id=chr18:6729698..6729724,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.62e-10!347;UBERON:0000468!6.11e-09!659;UBERON:0000922!2.84e-08!612;UBERON:0002050!9.03e-07!605;UBERON:0005423!9.03e-07!605 | |ontology_enrichment_uberon=UBERON:0000481!6.62e-10!347;UBERON:0000468!6.11e-09!659;UBERON:0000922!2.84e-08!612;UBERON:0002050!9.03e-07!605;UBERON:0005423!9.03e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.62e-07;17!UBERON:0000922;2.08e-07;49!UBERON:0004905;5.11e-07;8!UBERON:0000982;5.11e-07;8!UBERON:0004770;5.11e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.22e-07,17;UBERON:0004905,5.89e-07,8;UBERON:0000982,5.89e-07,8;UBERON:0004770,5.89e-07,8;UBERON:0001007,8.24e-07,145;UBERON:0001555,8.24e-07,145;UBERON:0007026,8.24e-07,145 | |||
|phase1_expression=1.63510541343501,2.99740733447376,7.18867460889453,2.00146596706261,12.9618717383913,6.97870819280295,2.53299878168311,0,1.82829939739887,0.245733936501509,0,0.873765488520689,0.527533956456907,32.5505508284923,31.1513533184241,0,0,0,0,1.84681587115182,1.42800483870977,2.19418305034661,0.572471974262113,0.684372125364421,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.79007586580942,1.0843174571537,1.50401373190767,1.44846518960824,0,0,0.945348171640679,0.443458794925128,1.05401742831751,3.73290365168481,0.364295288292542,0,0,0,0,0,0,0,0.993812036833525,0,1.38856200643038,2.26123176769604,0,4.67700671298115,0.417989933073621,0.258416759169329,0.35576626268671,2.34304428935269,1.20848795132744,0,1.46437234528902,0.367663080345869,1.62028389576352,9.37647146982838,18.1868791827198,11.3737595288155,6.13266549863533,8.54339093611316,10.6257011479636,0,0,0,0.993943903390637,0.12663051166458,1.32409180813219,0,1.41867352879343,3.92474320099615,0,0.49333509683432,9.02512002659322,0.404132016209064,0.163461903113459,11.04909221808,29.3849721484799,1.64025002283658,0.312160076830321,0,0.149448680551801,3.05329696473789,4.37056949793955,2.66856532734272,5.10385428137233,5.89604723096486,11.1591843669827,1.18800285728205,1.7308685049499,0,0,5.72342787443825,7.38199267244589,0,1.75591048352335,0,2.55404700141215,0,0,1.2813443329114,1.27159140695737,0.300091096084402,0,0.515281080091258,0.37223371266318,0.168776332241266,0.876933046450788,0.252433774244115,2.11714766877288,7.59736467048416,0,0.403008392910561,1.3564847384839,0,0,0,1.46368447355514,5.4337205011809,6.15827897208447,7.3599349060913,6.30802127189071,5.83963774521328,0,7.71889125831462,0,0,0,4.96888560167344,3.37169380156203,4.33819853790268,3.639701100169,5.22910665821775,2.60997681022206,3.64044532032444,4.70931516300831,1.92373578473195,6.64339909162183,0,3.2925920906512,0,0,0,0,0,16.6034392033203,0.171567810298526,1.64625428112938,1.1240175325762,0,0.185176890317059,0.651616610620649,2.07986957055916,0,1.15930404975077,0.587043471179108,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,1.23344192779897,2.1798003441664,1.466765716419,0.387815147273333,3.57656445851882,0.845302752556,0.531876233169741,0,0.771622122786426,1.41849132023278,0.799266537048298,8.43570162583071,1.08524321078289,0,0,4.6200953336531,0.791951872933429,1.80863626235752,0,1.29964888536674,0,0,0,0.718874566474748,3.44585807502342,2.85273810081437,0.868687840005475,2.05476322550383,2.68591444859843,0,0,0,0,1.77866236955724,2.60279707715243,1.54657762555539,0.670065061337395,0,0,0,0,25.8879047527385,22.5076734476855,22.5149969670781,0.207970861530807,0.356857977594324,0.473107245101804,0.468565659970853,6.62081419400982,6.82222512167955,6.2083842775503,2.65690239414175,5.16233671916769,4.95236602468072,8.02784745597236,7.20601190002797,0,0,0,0.303127571446259,3.32870879020994,1.20956117331872,4.71404834855676,2.91577749247319,2.52594084989766,3.20347873139252,6.14048698880044,1.28683136914886,1.48418066444991,0.462629081407967,0.710246901252508,2.7101961484557,1.55776328755086,0.813472649219715,18.4914957875182,0.200506470303285,0.368323955743585,3.55924789310281,4.18809686415449,7.73634048260602,0,0.616122696835318,1.56869953835371,0,0.211103257785751,3.4120015221269,0.510281115829547,3.23873874153209,3.08454505380579,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,3.40035338437484,6.86770986137576,5.03307949515587,0.574265537996172,0,0,3.963499449977,3.69716681075147,5.98664331431905,2.48105830472155,2.47066563197029,8.99103502268217,3.49429172406014,7.74578710126615,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,13.397701296948,4.11293252134344,1.71567174531442,0.767693373934002,24.8204613059674,0.636406495851874,0,11.1520923701655,7.96157386234559,3.76999687506197,0.202182481573316,0,0,0.48763373908959,0,0,6.00599610195137,0.282810863907425,2.26016233240486,0,0,0.438450885253763,3.47265320560013,17.7091583052591,0,0,0.563391205064483,0.286822704408103,0.982490410131212,0,1.06428319221179,1.26664581178598,23.0506425071931,9.48682934414288,12.9475846490644,0,0,0,3.76575203107117,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,16.3621575394771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,7.47191714286659,1.57768678274367,3.23185814404687,0,1.19372242368845,6.83018765915069,1.22864280839693,0,0.422008249231538,1.8922479853894,0,0,1.9924798825107,4.97311047956066,0,0,0,0,0,0.537063524026827,0,3.15658898038188,0,1.11136990144637,0,0.371072392647405,1.99613798001194,0,0.0874599999961957,15.2249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|short_description=p1@ARHGAP28 | |short_description=p1@ARHGAP28 | ||
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Latest revision as of 06:33, 20 September 2015
Short description: | p1@ARHGAP28 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP28_5end |
Coexpression cluster: | C3738_medulloblastoma_leiomyoblastoma_normal_tridermal_colon_synovial_rhabdomyosarcoma |
Association with transcript: | -96bp_to_ENST00000400091_5end |
EntrezGene: | ARHGAP28 |
HGNC: | 25509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.22e-07 | 17 |
articulation | 5.89e-07 | 8 |
skeletal joint | 5.89e-07 | 8 |
articular system | 5.89e-07 | 8 |
digestive system | 8.24e-07 | 145 |
digestive tract | 8.24e-07 | 145 |
primitive gut | 8.24e-07 | 145 |