FFCP PHASE1:Hg19::chr18:56246346..56246375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=0bp_to_AK092133,AX747371_5end | |association_with_transcript=0bp_to_AK092133,AX747371_5end | ||
|cluster_id=chr18:56246346..56246375,- | |||
|coexpression_cluster_id=C1324 | |||
|description=CAGE_peak_6_at_ALPK2_5end | |description=CAGE_peak_6_at_ALPK2_5end | ||
|id=chr18:56246346..56246375,- | |id=chr18:56246346..56246375,- | ||
|ontology_enrichment_celltype=CL:0000055!4.29e-21!180;CL:0000057!6.53e-20!75;CL:0002620!1.86e-11!23;CL:0002334!4.92e-10!12;CL:0000048!8.64e-10!430;CL:0000723!4.45e-09!436;CL:0000034!3.50e-08!444;CL:0000548!7.99e-08!679;CL:0000004!7.99e-08!679;CL:0000255!7.99e-08!679;CL:0000144!1.48e-07!625;CL:0000012!1.63e-07!682;CL:0000077!2.51e-07!19;CL:0000219!4.15e-07!390;CL:0000134!7.61e-07!358 | |ontology_enrichment_celltype=CL:0000055!4.29e-21!180;CL:0000057!6.53e-20!75;CL:0002620!1.86e-11!23;CL:0002334!4.92e-10!12;CL:0000048!8.64e-10!430;CL:0000723!4.45e-09!436;CL:0000034!3.50e-08!444;CL:0000548!7.99e-08!679;CL:0000004!7.99e-08!679;CL:0000255!7.99e-08!679;CL:0000144!1.48e-07!625;CL:0000012!1.63e-07!682;CL:0000077!2.51e-07!19;CL:0000219!4.15e-07!390;CL:0000134!7.61e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002334;9.73e-15;12!CL:0002620;2.52e-13;23!CL:0000077;6.37e-08;19!CL:0000057;7.76e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.06e-19,76;CL:0002334,2.14e-14,12;CL:0002620,2.45e-13,23;CL:0000219,1.12e-09,386;CL:0000048,4.09e-09,427;CL:0000134,4.35e-09,354;CL:0000723,1.11e-08,433;CL:0002320,1.54e-08,361;CL:0000034,3.96e-08,441;CL:0000077,4.70e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.85e-10;5!DOID:450;4.85e-10;5!DOID:66;4.85e-10;5!DOID:423;4.85e-10;5!DOID:0080000;4.85e-10;5!DOID:11722;4.85e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.00e-10,5;DOID:450,5.00e-10,5;DOID:66,5.00e-10,5;DOID:423,5.00e-10,5;DOID:0080000,5.00e-10,5;DOID:11722,5.00e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.33e-10!83;UBERON:0002329!4.33e-10!83;UBERON:0003077!4.33e-10!83;UBERON:0003059!4.33e-10!83;UBERON:0007282!4.33e-10!83;UBERON:0009618!4.33e-10!83;UBERON:0007285!4.33e-10!83;UBERON:0002199!8.15e-09!45;UBERON:0002416!8.15e-09!45;UBERON:0004290!2.20e-08!70;UBERON:0002097!3.15e-08!40;UBERON:0002384!3.82e-07!375;UBERON:0000486!6.99e-07!82 | |ontology_enrichment_uberon=UBERON:0000914!4.33e-10!83;UBERON:0002329!4.33e-10!83;UBERON:0003077!4.33e-10!83;UBERON:0003059!4.33e-10!83;UBERON:0007282!4.33e-10!83;UBERON:0009618!4.33e-10!83;UBERON:0007285!4.33e-10!83;UBERON:0002199!8.15e-09!45;UBERON:0002416!8.15e-09!45;UBERON:0004290!2.20e-08!70;UBERON:0002097!3.15e-08!40;UBERON:0002384!3.82e-07!375;UBERON:0000486!6.99e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.97e-09;41!UBERON:0002199;5.03e-08;46!UBERON:0002416;5.03e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.61e-12,46;UBERON:0002416,1.61e-12,46;UBERON:0002097,5.01e-11,41;UBERON:0002384,3.54e-09,371;UBERON:0003102,1.26e-07,99 | |||
|phase1_expression=2.72517568905835,1.2846031433459,2.25527046553554,0,0.446961094427288,4.36169262050184,0,1.26343974685366,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,1.46379839637152,0.369363174230364,0.408001382488506,0.626909442956176,1.43117993565528,1.09499540058307,1.38096903554283,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,1.0246428261164,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0.918251677112708,2.24650318953266,0.639337125799041,0,0,0,0.290209238628584,0,0,0,1.5644487552606,1.3031330682307,0,2.20966581592539,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,3.00802746381534,1.15877215168659,0,0,0.189069634328136,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,17.4780118673449,0.573673241497627,0,2.24271040056923,0,1.72667283892012,1.55605517699883,0,0.163461903113459,0.302714855289863,0,0,0.312160076830321,0,0,0.117434498643765,0.485618833104395,0.421352420106746,0.408308342509787,0,0,1.18800285728205,0.494533858557114,0,0,0,0.125118519871964,0.554128230968366,2.19488810440419,9.19463387397059,0.600952235626387,0.226864366320042,21.8855355540412,6.40672166455702,17.1664839939245,17.7053746689797,10.5113579823208,17.7771972631484,5.21127197728451,15.864975230679,4.77441325289873,33.8261257487113,18.6861294243868,0.646584227275248,42.6011511019937,15.9188315199672,4.40857540007268,0,0.272746120590835,0,0,0,0,0,0,0,9.38697193978896,3.85944562915731,1.38134921352481,0.928735856063958,1.44375896333917,0.236613600079688,0.505754070234305,0.241011029883482,0.661763836394364,0.871517776369625,0,0.269662616320329,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.70445216541493,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.66004457238855,4.13669490424889,0,0,1.06375246633948,2.08014873822732,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0.325736184293735,0,0,7.53598442648965,5.22920075160176,10.497164074116,0,0,0,2.63587341040741,1.14861935834114,0,2.31650090668127,0.410952645100767,4.65558504423729,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,4.57535895367776,3.7470087647404,1.89242898040722,2.34282829985426,0,0,0,1.32845119707087,0.368738337083406,5.82120216936155,0,0,0,0,0,0,0,0,4.21783273291921,18.2619748212794,4.49056151092918,7.17579235831925,5.11707249066703,5.95159508231348,1.48418066444991,2.00472601943452,1.24293207719189,1.14978018419333,0.519254429183621,1.27831416305955,0,0,0,2.18147451512753,1.63882051206045,3.2781103739856,0,0.15403067420883,0,0,1.05551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.773365746336976,0,0.15350367472613,0.964856007391714,0.429680979473094,0,0.511359764496605,1.69160867728801,0,0,0,0,0.464845549297286,4.40737285562896,0.6970372701606,0,0,1.73986598415015,0,0.286249773483982,1.48863347743867,1.89827654831236,3.62197368455267,0,0,0.636406495851874,0,0.719489830333259,1.37268514868027,0.942499218765491,0.202182481573316,0,0,0,0,0,0,1.1312434556297,0,0,0,1.31535265576129,0,0,0.202910376962704,0,0.281695602532241,0,0.392996164052485,0.35667105148125,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0.306806047506464,0,1.55519793830904,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,2.53197677433632,0,0,0,0,0,0,0,0.123563938946503,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.411125773940253,0.19871461170299,0,0,0.961905843018405,0,0.599428828746391,0,0,0,0,0,0,2.8539883275459,2.824276850433,1.32597682927218,0.288950589901519,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0.599037001496973,0,0.89268582976749,0.0671834724867263,4.32359860250884,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0.316801009558219,0,0,0,0.662091970365432,0,0,1.72844298240254,0.979762080328227,0,0,3.40776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49254802886874,3.03827302801392,0,0.378806010550178,0.754703705257725,0,0.228840068396924,2.41969478021182,1.08806040407946,0,1.91156120596443,0,1.08684069813382,0,0.53168342911599,1.5652351854352,2.70463696194993,2.66563648518157,1.62748293281865,2.72772988803839,0.751873899297419,0.464033759878494,2.78667122089031,5.200360940621,4.8075398725591,4.7144928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| ||
|short_description=p6@ALPK2 | |short_description=p6@ALPK2 | ||
}} | }} |
Latest revision as of 00:02, 20 September 2015
Short description: | p6@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALPK2_5end |
Coexpression cluster: | C1324_Fibroblast_Preadipocyte_basal_migratory_mesenchymal_Smooth_spindle |
Association with transcript: | 0bp_to_AK092133, AX747371_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.06e-19 | 76 |
preadipocyte | 2.14e-14 | 12 |
skin fibroblast | 2.45e-13 | 23 |
motile cell | 1.12e-09 | 386 |
multi fate stem cell | 4.09e-09 | 427 |
mesenchymal cell | 4.35e-09 | 354 |
somatic stem cell | 1.11e-08 | 433 |
connective tissue cell | 1.54e-08 | 361 |
stem cell | 3.96e-08 | 441 |
mesothelial cell | 4.70e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
integument | 1.61e-12 | 46 |
integumental system | 1.61e-12 | 46 |
skin of body | 5.01e-11 | 41 |
connective tissue | 3.54e-09 | 371 |
surface structure | 1.26e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.00e-10 | 5 |
myotonic disease | 5.00e-10 | 5 |
muscle tissue disease | 5.00e-10 | 5 |
myopathy | 5.00e-10 | 5 |
muscular disease | 5.00e-10 | 5 |
myotonic dystrophy | 5.00e-10 | 5 |