FFCP PHASE1:Hg19::chr18:56246235..56246259,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=43bp_to_AY044450_5end | |association_with_transcript=43bp_to_AY044450_5end | ||
|cluster_id=chr18:56246235..56246259,- | |||
|description=CAGE_peak_4_at_ALPK2_5end | |description=CAGE_peak_4_at_ALPK2_5end | ||
|id=chr18:56246235..56246259,- | |id=chr18:56246235..56246259,- | ||
|ontology_enrichment_celltype=CL:0000055!1.26e-23!180;CL:0000057!2.95e-17!75;CL:0000077!1.06e-09!19;CL:0002620!2.72e-09!23;CL:0000048!3.15e-08!430;CL:0000723!1.45e-07!436;CL:0000034!2.18e-07!444 | |ontology_enrichment_celltype=CL:0000055!1.26e-23!180;CL:0000057!2.95e-17!75;CL:0000077!1.06e-09!19;CL:0002620!2.72e-09!23;CL:0000048!3.15e-08!430;CL:0000723!1.45e-07!436;CL:0000034!2.18e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.36e-15;23!CL:0000077;1.18e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.37e-17,76;CL:0002620,2.21e-15,23;CL:0000077,1.09e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.60e-10;5!DOID:450;4.60e-10;5!DOID:66;4.60e-10;5!DOID:423;4.60e-10;5!DOID:0080000;4.60e-10;5!DOID:11722;4.60e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.38e-10,5;DOID:450,4.38e-10,5;DOID:66,4.38e-10,5;DOID:423,4.38e-10,5;DOID:0080000,4.38e-10,5;DOID:11722,4.38e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!7.70e-09!70;UBERON:0000914!2.78e-08!83;UBERON:0002329!2.78e-08!83;UBERON:0003077!2.78e-08!83;UBERON:0003059!2.78e-08!83;UBERON:0007282!2.78e-08!83;UBERON:0009618!2.78e-08!83;UBERON:0007285!2.78e-08!83;UBERON:0002199!4.40e-08!45;UBERON:0002416!4.40e-08!45;UBERON:0001134!4.70e-08!61;UBERON:0002036!4.70e-08!61;UBERON:0003082!4.70e-08!61;UBERON:0002385!1.91e-07!63;UBERON:0001015!1.91e-07!63;UBERON:0000383!1.91e-07!63;UBERON:0002097!3.07e-07!40;UBERON:0005256!4.84e-07!143;UBERON:0000486!8.05e-07!82 | |ontology_enrichment_uberon=UBERON:0004290!7.70e-09!70;UBERON:0000914!2.78e-08!83;UBERON:0002329!2.78e-08!83;UBERON:0003077!2.78e-08!83;UBERON:0003059!2.78e-08!83;UBERON:0007282!2.78e-08!83;UBERON:0009618!2.78e-08!83;UBERON:0007285!2.78e-08!83;UBERON:0002199!4.40e-08!45;UBERON:0002416!4.40e-08!45;UBERON:0001134!4.70e-08!61;UBERON:0002036!4.70e-08!61;UBERON:0003082!4.70e-08!61;UBERON:0002385!1.91e-07!63;UBERON:0001015!1.91e-07!63;UBERON:0000383!1.91e-07!63;UBERON:0002097!3.07e-07!40;UBERON:0005256!4.84e-07!143;UBERON:0000486!8.05e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.11e-10;6!UBERON:0002358;3.11e-10;6!UBERON:0003684;3.11e-10;6!UBERON:0001178;3.11e-10;6!UBERON:0002097;4.28e-08;41!UBERON:0002199;4.27e-07;46!UBERON:0002416;4.27e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.69e-10,41;UBERON:0003688,3.41e-10,6;UBERON:0002358,3.41e-10,6;UBERON:0003684,3.41e-10,6;UBERON:0001178,3.41e-10,6;UBERON:0002199,9.17e-10,46;UBERON:0002416,9.17e-10,46;UBERON:0003102,1.40e-07,99 | |||
|phase1_expression=0.908391896352783,0.856402095563933,2.67813367782345,2.00146596706261,2.23480547213644,0,2.53299878168311,0,0.261185628199839,0,0,0.655324116390517,0,0,0,0,0,0,0.487932798790507,2.21617904538218,0.612002073732759,0.626909442956176,7.72837165253853,3.14811177667634,7.03038781730896,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0,3.00802746381534,1.30361867064741,0,0,0,1.10864698731282,0.702678285545008,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0.886413581652058,64.3508618752243,4.30254931123221,1.06400514659507,7.28880880184999,0,0.74000264525148,1.8672662123986,0,0,0.454072282934794,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.245668634623536,0,0,1.48360157567134,0,0.718618141816238,0,0,0.831192346452549,0.438977620880838,13.1789752193578,0.300476117813194,0.226864366320042,7.89314397030993,4.05759038755278,9.74886745333984,8.10245959427886,4.84346887420663,7.9868567414145,3.16398655763703,6.24472429292685,3.50773218580315,24.4860761016791,7.82424138459544,2.7479829659198,28.0457578088125,9.16844093871526,1.3564847384839,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,10.9514672630871,0.643240938192885,1.38134921352481,0.928735856063958,0,0.473227200159376,0.337169380156203,0.964044119533928,0.110293972732394,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,0.87192013766656,0.7333828582095,2.19761916788222,0,0,1.32969058292435,2.08014873822732,0,0,0,0.714889968290738,0,0,0.65147236858747,0.710783897485092,0,10.2489388200259,3.48613383440118,24.1934638660578,0,0,0,3.83399768786532,2.29723871668228,0,2.17171960001369,0.410952645100767,3.40215830155802,0,0,0,0,1.01637849688985,0,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0.12269149171914,0,0,2.28767947683888,5.17444067511769,2.36553622550902,1.52283839490527,0,0,0,0.664225598535437,0.184369168541703,1.65078867489357,0,0,0,0,0,0,0,0.30239029332968,3.47350930946288,10.7423381301644,1.96462066103151,5.38184426873944,4.60536524160033,2.41280881715411,0,0.771048469013278,0.177561725313127,0.821271560138091,0,0.697262270759755,0.120859449591622,0,0,4.24813458209045,3.82391452814106,7.0807184078089,0,0.0770153371044148,0,1.46139224653261,0.949964660035881,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,3.21367859688319,0.386682873168488,0.154048617114644,0,0.413509717453592,0.322260734604821,0,0.426133137080504,0.890320356467374,0,0,0,0,4.18360994367557,20.147990197161,0.6970372701606,0.308033580176089,0,0.869932992075073,0.37064843820784,0.286249773483982,1.86079184679834,2.53103539774981,8.76898892049594,0.255897791311334,0.855877976067841,0.318203247925937,0,2.87795932133304,1.92175920815238,0.589062011728432,0,0,0.421258456238981,0.975267478179181,0,0,2.59349831675173,3.67654123079653,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.281695602532241,0,0.589494246078727,0,0.354761064070598,0.844430541190656,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.70481688083848,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,2.48655523978033,0,0.409074730008619,0,4.0435146396035,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0.569710279235006,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,2.53197677433632,0,0,0,0,0,0,0.889563386041866,0.741383633679017,0.208843899010911,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0.411125773940253,0.19871461170299,0,0,0.480952921509202,0,0.19980960958213,0,0,0,0,0.124252535565433,0,5.57207244901818,6.06696508611533,3.36594118199862,0.866851769704557,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0.429226048136571,0.223171457441873,0.53746777989381,1.08089965062721,0,0.157566364614447,0.0824158583811665,0,0,0.677386656526276,0,0,0,0,0,0.2249738915515,0,0,0,1.81253126788156,0.104909176269996,0,0.717149357331379,0,1.42939065274673,0,0,0,1.72844298240254,0,0,0,2.04465626142506,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.8697064787778,1.66441758450784,0.757612021100357,0.50313580350515,0,0.457680136793847,1.20984739010591,0.777186002913902,0,0.796483835818512,0,0.465788870628778,0.8294124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|short_description=p4@ALPK2 | |short_description=p4@ALPK2 | ||
}} | }} |
Latest revision as of 00:00, 20 September 2015
Short description: | p4@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_AY044450_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.37e-17 | 76 |
skin fibroblast | 2.21e-15 | 23 |
mesothelial cell | 1.09e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.69e-10 | 41 |
omentum | 3.41e-10 | 6 |
peritoneum | 3.41e-10 | 6 |
abdominal cavity | 3.41e-10 | 6 |
visceral peritoneum | 3.41e-10 | 6 |
integument | 9.17e-10 | 46 |
integumental system | 9.17e-10 | 46 |
surface structure | 1.40e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.38e-10 | 5 |
myotonic disease | 4.38e-10 | 5 |
muscle tissue disease | 4.38e-10 | 5 |
myopathy | 4.38e-10 | 5 |
muscular disease | 4.38e-10 | 5 |
myotonic dystrophy | 4.38e-10 | 5 |