FFCP PHASE1:Hg19::chr18:53068940..53068951,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUG3 | |UniProt=B4DUG3 | ||
|association_with_transcript=-19bp_to_ENST00000537856,uc010xdu.1_5end | |association_with_transcript=-19bp_to_ENST00000537856,uc010xdu.1_5end | ||
|cluster_id=chr18:53068940..53068951,- | |||
|coexpression_cluster_id=C1237 | |||
|description=CAGE_peak_21_at_TCF4_5end | |description=CAGE_peak_21_at_TCF4_5end | ||
|id=chr18:53068940..53068951,- | |id=chr18:53068940..53068951,- | ||
|ontology_enrichment_celltype=CL:0002139!1.61e-19!24;CL:0000071!2.26e-14!18;CL:0002546!2.26e-14!18;CL:0000115!2.79e-11!35;CL:0002078!1.06e-10!44;CL:0000222!9.54e-10!119;CL:1000413!6.55e-09!9;CL:0000213!6.79e-09!57;CL:0000215!6.79e-09!57;CL:0005020!9.80e-07!6;CL:0002138!9.80e-07!6;CL:0005022!9.80e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.61e-19!24;CL:0000071!2.26e-14!18;CL:0002546!2.26e-14!18;CL:0000115!2.79e-11!35;CL:0002078!1.06e-10!44;CL:0000222!9.54e-10!119;CL:1000413!6.55e-09!9;CL:0000213!6.79e-09!57;CL:0000215!6.79e-09!57;CL:0005020!9.80e-07!6;CL:0002138!9.80e-07!6;CL:0005022!9.80e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.81e-42;24!CL:0000071;1.84e-30;18!CL:0000115;7.18e-26;36!CL:0002078;2.44e-18;45!CL:1000413;1.47e-17;9!CL:0002138;4.83e-13;6!CL:0002544;1.10e-12;6!CL:0000213;7.66e-12;58!CL:0000215;7.66e-12;58!CL:0002543;2.28e-09;6!CL:0002618;1.35e-07;3!CL:0002144;6.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.26e-42,24;CL:0000071,9.77e-31,18;CL:0002546,9.77e-31,18;CL:0000115,1.55e-30,36;CL:0002078,5.42e-27,45;CL:0000213,3.67e-19,58;CL:0000215,3.67e-19,58;CL:1000413,8.41e-18,9;CL:0005020,5.20e-13,6;CL:0002138,5.20e-13,6;CL:0005022,5.20e-13,6;CL:0002544,6.12e-13,6;CL:0002543,2.01e-09,6;CL:0000222,1.40e-08,121;CL:0002618,1.39e-07,3;CL:0002144,6.46e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.84e-30;18!CL:0005022;4.83e-13;6!UBERON:0004872;8.31e-09;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.74e-29!115;UBERON:0004111!1.10e-23!241;UBERON:0000025!1.74e-22!194;UBERON:0000477!6.26e-21!286;UBERON:0001049!5.03e-19!57;UBERON:0005068!5.03e-19!57;UBERON:0006241!5.03e-19!57;UBERON:0007135!5.03e-19!57;UBERON:0001017!8.01e-19!82;UBERON:0004872!6.20e-18!84;UBERON:0005743!8.30e-18!86;UBERON:0000119!1.66e-17!312;UBERON:0000483!2.47e-17!309;UBERON:0002616!5.52e-17!59;UBERON:0000073!2.86e-16!94;UBERON:0001016!2.86e-16!94;UBERON:0000955!3.87e-16!69;UBERON:0006238!3.87e-16!69;UBERON:0003080!1.64e-15!42;UBERON:0000055!1.93e-15!69;UBERON:0002346!4.72e-15!90;UBERON:0003075!7.89e-15!86;UBERON:0007284!7.89e-15!86;UBERON:0002780!8.77e-15!41;UBERON:0001890!8.77e-15!41;UBERON:0006240!8.77e-15!41;UBERON:0001986!2.26e-14!18;UBERON:0004638!2.26e-14!18;UBERON:0004852!2.26e-14!18;UBERON:0002049!3.15e-14!79;UBERON:0007798!3.15e-14!79;UBERON:0000468!6.07e-14!659;UBERON:0001009!1.10e-13!113;UBERON:0000475!3.48e-13!365;UBERON:0001893!3.94e-13!34;UBERON:0004535!5.06e-13!110;UBERON:0001981!5.57e-13!60;UBERON:0007500!5.57e-13!60;UBERON:0004537!5.57e-13!60;UBERON:0006965!5.57e-13!60;UBERON:0002020!1.37e-12!34;UBERON:0003528!1.37e-12!34;UBERON:0002791!1.64e-12!33;UBERON:0001869!2.45e-12!32;UBERON:0000487!5.03e-12!22;UBERON:0000956!5.92e-12!25;UBERON:0000203!5.92e-12!25;UBERON:0006914!6.53e-12!25;UBERON:0001950!1.20e-10!20;UBERON:0000467!1.82e-10!625;UBERON:0002619!1.95e-10!22;UBERON:0000480!2.43e-10!626;UBERON:0003056!1.42e-09!61;UBERON:0003914!3.49e-09!118;UBERON:0003915!6.55e-09!9;UBERON:0004700!6.55e-09!9;UBERON:0001917!6.55e-09!9;UBERON:0000481!6.99e-09!347;UBERON:0000924!2.06e-08!173;UBERON:0006601!2.06e-08!173;UBERON:0000153!3.03e-08!129;UBERON:0007811!3.03e-08!129;UBERON:0004121!4.00e-08!169;UBERON:0000033!7.49e-08!123;UBERON:0001637!1.45e-07!42;UBERON:0003509!1.45e-07!42;UBERON:0004572!1.45e-07!42;UBERON:0007100!6.92e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!6.74e-29!115;UBERON:0004111!1.10e-23!241;UBERON:0000025!1.74e-22!194;UBERON:0000477!6.26e-21!286;UBERON:0001049!5.03e-19!57;UBERON:0005068!5.03e-19!57;UBERON:0006241!5.03e-19!57;UBERON:0007135!5.03e-19!57;UBERON:0001017!8.01e-19!82;UBERON:0004872!6.20e-18!84;UBERON:0005743!8.30e-18!86;UBERON:0000119!1.66e-17!312;UBERON:0000483!2.47e-17!309;UBERON:0002616!5.52e-17!59;UBERON:0000073!2.86e-16!94;UBERON:0001016!2.86e-16!94;UBERON:0000955!3.87e-16!69;UBERON:0006238!3.87e-16!69;UBERON:0003080!1.64e-15!42;UBERON:0000055!1.93e-15!69;UBERON:0002346!4.72e-15!90;UBERON:0003075!7.89e-15!86;UBERON:0007284!7.89e-15!86;UBERON:0002780!8.77e-15!41;UBERON:0001890!8.77e-15!41;UBERON:0006240!8.77e-15!41;UBERON:0001986!2.26e-14!18;UBERON:0004638!2.26e-14!18;UBERON:0004852!2.26e-14!18;UBERON:0002049!3.15e-14!79;UBERON:0007798!3.15e-14!79;UBERON:0000468!6.07e-14!659;UBERON:0001009!1.10e-13!113;UBERON:0000475!3.48e-13!365;UBERON:0001893!3.94e-13!34;UBERON:0004535!5.06e-13!110;UBERON:0001981!5.57e-13!60;UBERON:0007500!5.57e-13!60;UBERON:0004537!5.57e-13!60;UBERON:0006965!5.57e-13!60;UBERON:0002020!1.37e-12!34;UBERON:0003528!1.37e-12!34;UBERON:0002791!1.64e-12!33;UBERON:0001869!2.45e-12!32;UBERON:0000487!5.03e-12!22;UBERON:0000956!5.92e-12!25;UBERON:0000203!5.92e-12!25;UBERON:0006914!6.53e-12!25;UBERON:0001950!1.20e-10!20;UBERON:0000467!1.82e-10!625;UBERON:0002619!1.95e-10!22;UBERON:0000480!2.43e-10!626;UBERON:0003056!1.42e-09!61;UBERON:0003914!3.49e-09!118;UBERON:0003915!6.55e-09!9;UBERON:0004700!6.55e-09!9;UBERON:0001917!6.55e-09!9;UBERON:0000481!6.99e-09!347;UBERON:0000924!2.06e-08!173;UBERON:0006601!2.06e-08!173;UBERON:0000153!3.03e-08!129;UBERON:0007811!3.03e-08!129;UBERON:0004121!4.00e-08!169;UBERON:0000033!7.49e-08!123;UBERON:0001637!1.45e-07!42;UBERON:0003509!1.45e-07!42;UBERON:0004572!1.45e-07!42;UBERON:0007100!6.92e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.84e-30;18!UBERON:0001986;1.84e-30;18!UBERON:0004852;1.84e-30;18!UBERON:0000487;3.15e-27;22!UBERON:0006914;6.52e-26;25!UBERON:0003915;1.47e-17;9!UBERON:0004700;1.47e-17;9!UBERON:0001917;1.47e-17;9!UBERON:0000490;4.66e-15;33!UBERON:0000055;5.74e-10;65!UBERON:0001473;1.60e-09;8!UBERON:0004536;1.60e-09;8!UBERON:0006558;1.60e-09;8!UBERON:0000956;4.87e-09;25!UBERON:0000203;4.87e-09;25!UBERON:0002619;5.72e-09;22!UBERON:0001872;6.07e-09;5!UBERON:0001893;1.46e-08;34!UBERON:0001869;1.78e-08;32!UBERON:0001950;2.04e-08;20!UBERON:0001638;3.39e-08;9!UBERON:0003920;3.39e-08;9!UBERON:0004582;3.39e-08;9!UBERON:0002465;2.04e-07;10!UBERON:0002791;3.32e-07;32!UBERON:0010523;6.21e-07;3!UBERON:0001915;6.21e-07;3!UBERON:0001982;6.21e-07;3 | |||
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| ||
|short_description=p21@TCF4 | |short_description=p21@TCF4 | ||
}} | }} |
Latest revision as of 20:53, 19 September 2015
Short description: | p21@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_TCF4_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | -19bp_to_ENST00000537856, uc010xdu.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.26e-42 | 24 |
blood vessel endothelial cell | 9.77e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.77e-31 | 18 |
endothelial cell | 1.55e-30 | 36 |
meso-epithelial cell | 5.42e-27 | 45 |
lining cell | 3.67e-19 | 58 |
barrier cell | 3.67e-19 | 58 |
endothelial cell of artery | 8.41e-18 | 9 |
lymphangioblast | 5.20e-13 | 6 |
endothelial cell of lymphatic vessel | 5.20e-13 | 6 |
vascular lymphangioblast | 5.20e-13 | 6 |
aortic endothelial cell | 6.12e-13 | 6 |
vein endothelial cell | 2.01e-09 | 6 |
mesodermal cell | 1.40e-08 | 121 |
endothelial cell of umbilical vein | 1.39e-07 | 3 |
capillary endothelial cell | 6.46e-07 | 3 |