FFCP PHASE1:Hg19::chr12:107168099..107168119,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:107168099..107168119,+
|short_description=p6@RIC8B
|description=CAGE_peak_6_at_RIC8B_5end
|association_with_transcript=-253bp_to_ENST00000392837_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55188 | |EntrezGene=55188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25555 | |HGNC=25555 | ||
|TSSclassifier=strong | |||
|UniProt=B7WPL0 | |UniProt=B7WPL0 | ||
|association_with_transcript=-253bp_to_ENST00000392837_5end | |||
|cluster_id=chr12:107168099..107168119,+ | |||
|description=CAGE_peak_6_at_RIC8B_5end | |||
|id=chr12:107168099..107168119,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;4.41e-07;1!CL:0000501;4.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,5.14e-07,1;CL:0000501,5.14e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.41e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.26e-07!94;UBERON:0001016!1.26e-07!94;UBERON:0001017!5.53e-07!82;UBERON:0002020!6.51e-07!34;UBERON:0003528!6.51e-07!34;UBERON:0005743!6.68e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.54e-13;4!UBERON:0002435;1.54e-13;4!UBERON:0000204;1.54e-13;4!UBERON:0009663;2.34e-13;7!UBERON:0002370;1.69e-12;2!UBERON:0003714;1.69e-12;2!UBERON:0005058;1.69e-12;2!UBERON:0009113;1.69e-12;2!UBERON:0002420;2.03e-10;9!UBERON:0000125;2.03e-10;9!UBERON:0007245;2.03e-10;9!UBERON:0002308;2.03e-10;9!UBERON:0010009;2.03e-10;9!UBERON:0010011;2.03e-10;9!UBERON:0000454;2.03e-10;9!UBERON:0005383;1.28e-08;3!UBERON:0005382;1.28e-08;3!UBERON:0001882;4.41e-07;1!UBERON:0001874;4.41e-07;1!UBERON:0002134;4.41e-07;1!UBERON:0000941;4.41e-07;1!UBERON:0001785;4.41e-07;1!UBERON:0002464;4.41e-07;1!UBERON:0004904;4.41e-07;1!UBERON:0001021;4.41e-07;1!UBERON:0005208;4.41e-07;1!UBERON:0004145;4.41e-07;1!UBERON:0005946;4.41e-07;1!UBERON:0005403;4.41e-07;1!UBERON:0005965;4.41e-07;1!UBERON:0002078;4.41e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,8.30e-14,4;UBERON:0002435,8.30e-14,4;UBERON:0000204,8.30e-14,4;UBERON:0010082,8.30e-14,4;UBERON:0009663,1.83e-13,7;UBERON:0003714,9.00e-13,2;UBERON:0002420,1.68e-10,9;UBERON:0000125,1.68e-10,9;UBERON:0007245,1.68e-10,9;UBERON:0002308,1.68e-10,9;UBERON:0010009,1.68e-10,9;UBERON:0010011,1.68e-10,9;UBERON:0000454,1.68e-10,9;UBERON:0005383,4.86e-09,3;UBERON:0005382,4.86e-09,3;UBERON:0001874,2.23e-07,1;UBERON:0002134,3.60e-07,1;UBERON:0005208,3.60e-07,1;UBERON:0005946,3.60e-07,1;UBERON:0005965,3.60e-07,1;UBERON:0002078,3.60e-07,1;UBERON:0000941,4.06e-07,1;UBERON:0001785,4.06e-07,1;UBERON:0002464,4.06e-07,1;UBERON:0004904,4.06e-07,1;UBERON:0001021,4.06e-07,1;UBERON:0003902,4.06e-07,1;UBERON:0005425,4.06e-07,1;UBERON:0002370,7.75e-07,4;UBERON:0005058,7.75e-07,4;UBERON:0009113,7.75e-07,4;UBERON:0003295,7.75e-07,4;UBERON:0005562,7.75e-07,4;UBERON:0001882,8.18e-07,1;UBERON:0005403,8.18e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0.85870796139317,0.410623275218653,0.627713197974014,0.229240217243854,0.492603536699674,0.550975469195755,0,0.383829398097213,0.154816123316076,1.83884244895785,0.30120591877825,0,0.232401601740905,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0.755751887377619,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.768482119587302,0.709446689665756,1.03423704220986,0.645484683583826,2.70852973188684,0.376484679085209,0.545812300115692,0.674170453335254,0.918251677112708,0.962787081228281,0.639337125799041,0.659702600373432,0.199463657621632,0,1.7412554317715,0,2.4912889959823,0.502497330513487,0.521482918420201,0.65156653411535,1.81619850790011,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0.378139268656271,0.443458794925128,0.614843499851882,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.446498641420399,0,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.529636723252875,0.860509862246441,0.354668382198357,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0,0.491337269247072,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0.113432183160021,1.4351170855109,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0.675105328965065,0.194874010322397,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0.508681776931463,0.193260853163297,0,0,0.975789649036763,0.397589304964456,0.232387885739037,0.518305275076852,0,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.220587945464788,0.435758888184812,0.237270619111097,0.539325232640658,0.588664395376038,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0.425325291727159,0.179117045405697,0,0.383382679165211,0,0.352193736052904,0.207328115540772,0.144119953416961,0.12624243342638,0.317489471460845,0,0,1.71072446022705,0,0.300343057843917,0.571652865261156,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,1.20575750823834,0,0.299918973546171,1.2162378064119,0,0,0.479249710983165,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0,0.254094624222463,1.30139853857622,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.60818530127658,0,0.686286847621712,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0.546273504020151,0.131124414959424,0,0.231046011313244,0,0,0.422206515571503,0,0.510281115829547,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0.650756789328606,0.309123034943167,0.54941678891006,0.165018999841176,0,0,0,0.290012154876366,0.308097234229289,0.614014698904518,0,0.214840489736547,0.580066775656914,0.340906509664404,0.178064071293475,0,0.192190067365106,0.127612712494584,0.10115778085555,0.929691098594572,0,0,0,0,0.869932992075073,0.37064843820784,0.429374660225974,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0.608731130888112,0,0,0.286822704408103,0.196498082026242,0.7133421029625,0,0,0,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0,0,0.432807638929335,1.06712765022621,0.159426272728822,0,0.191505370132367,0,0,0,0.228234679033192,0.626719583092093,0,0,0,0.605399121573143,0,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0.835218521685727,0,0,0,0,0,0.586032717087576,0.242721043499027,0.222886768554957,0,0.71623345421307,0,0,0,0.844016498463076,0,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0.537063524026827,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0.344743373241465,0.583209226766509,0.520874984799877,1.77148277162768,0.60298219312704,0,0.110579259931225,0,0.219385397153973,0.10893846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| ||
|short_description=p6@RIC8B | |||
}} | }} |
Latest revision as of 03:08, 16 September 2015
Short description: | p6@RIC8B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RIC8B_5end |
Coexpression cluster: | NA |
Association with transcript: | -253bp_to_ENST00000392837_5end |
EntrezGene: | RIC8B |
HGNC: | 25555 |
UniProt: | B7WPL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 5.14e-07 | 1 |
granulosa cell | 5.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 8.30e-14 | 4 |
striatum | 8.30e-14 | 4 |
ventral part of telencephalon | 8.30e-14 | 4 |
future corpus striatum | 8.30e-14 | 4 |
telencephalic nucleus | 1.83e-13 | 7 |
neural tissue | 9.00e-13 | 2 |
basal ganglion | 1.68e-10 | 9 |
neural nucleus | 1.68e-10 | 9 |
nuclear complex of neuraxis | 1.68e-10 | 9 |
nucleus of brain | 1.68e-10 | 9 |
aggregate regional part of brain | 1.68e-10 | 9 |
collection of basal ganglia | 1.68e-10 | 9 |
cerebral subcortex | 1.68e-10 | 9 |
caudate-putamen | 4.86e-09 | 3 |
dorsal striatum | 4.86e-09 | 3 |
putamen | 2.23e-07 | 1 |
tricuspid valve | 3.60e-07 | 1 |
right atrium valve | 3.60e-07 | 1 |
outflow tract of atrium | 3.60e-07 | 1 |
outflow part of right atrium | 3.60e-07 | 1 |
right cardiac atrium | 3.60e-07 | 1 |
cranial nerve II | 4.06e-07 | 1 |
cranial nerve | 4.06e-07 | 1 |
nerve trunk | 4.06e-07 | 1 |
nerve connecting eye with brain | 4.06e-07 | 1 |
nerve | 4.06e-07 | 1 |
retinal neural layer | 4.06e-07 | 1 |
presumptive neural retina | 4.06e-07 | 1 |
thymus | 7.75e-07 | 4 |
hemolymphoid system gland | 7.75e-07 | 4 |
thymic region | 7.75e-07 | 4 |
pharyngeal gland | 7.75e-07 | 4 |
thymus primordium | 7.75e-07 | 4 |
nucleus accumbens | 8.18e-07 | 1 |
ventral striatum | 8.18e-07 | 1 |