FFCP PHASE1:Hg19::chr12:105415655..105415668,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:105415655..105415668,-
|short_description=p5@ALDH1L2
|description=CAGE_peak_5_at_ALDH1L2_5end
|association_with_transcript=-381bp_to_AK094088_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=160428 | |EntrezGene=160428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26777 | |HGNC=26777 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-381bp_to_AK094088_5end | |||
|cluster_id=chr12:105415655..105415668,- | |||
|description=CAGE_peak_5_at_ALDH1L2_5end | |||
|id=chr12:105415655..105415668,- | |||
|ontology_enrichment_celltype=CL:0000057!3.24e-21!75;CL:0000055!5.78e-20!180;CL:0002620!1.31e-10!23;CL:0002334!3.27e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.01e-14;12!CL:0002580;5.26e-12;3!CL:0000135;8.02e-12;3!CL:0000388;8.02e-12;3!CL:0002615;2.02e-11;3!CL:0002579;2.02e-11;3!CL:0002622;2.02e-11;3!CL:0000499;6.54e-09;28!CL:0002617;1.72e-08;2!CL:0000136;8.58e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.34e-14,12;CL:0000057,2.80e-12,76;CL:0000135,4.26e-12,3;CL:0002580,4.26e-12,3;CL:0000388,4.26e-12,3;CL:0002615,7.67e-12,3;CL:0002579,1.47e-11,3;CL:0000136,1.77e-11,15;CL:0002622,2.11e-11,3;CL:0000499,4.83e-09,28;CL:0002617,1.15e-08,2;CL:0002320,9.30e-08,361;CL:0000134,1.76e-07,354;CL:0000048,1.85e-07,427;CL:0000723,3.24e-07,433;CL:0000034,6.66e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.75e-09!95;UBERON:0002097!1.75e-07!40;UBERON:0003688!3.16e-07!6;UBERON:0002358!3.16e-07!6;UBERON:0003684!3.16e-07!6;UBERON:0001178!3.16e-07!6;UBERON:0002199!4.86e-07!45;UBERON:0002416!4.86e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.15e-21;6!UBERON:0002358;4.15e-21;6!UBERON:0003684;4.15e-21;6!UBERON:0001178;4.15e-21;6!UBERON:0004457;7.39e-14;9!UBERON:0000042;7.39e-14;9!UBERON:0007846;8.02e-12;3!UBERON:0000043;8.02e-12;3!UBERON:0007845;8.02e-12;3!UBERON:0000310;3.26e-09;10!UBERON:0003104;1.29e-08;7!UBERON:0009142;1.29e-08;7!UBERON:0001443;2.42e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.17e-21,6;UBERON:0002358,1.17e-21,6;UBERON:0003684,1.17e-21,6;UBERON:0001178,1.17e-21,6;UBERON:0007846,4.26e-12,3;UBERON:0000043,4.26e-12,3;UBERON:0007845,4.26e-12,3;UBERON:0004457,1.73e-10,12;UBERON:0000042,1.73e-10,12;UBERON:0000310,2.44e-09,10;UBERON:0001443,1.87e-08,11;UBERON:0002384,2.67e-07,371 | |||
|phase1_expression=1.63510541343501,4.28201047781966,1.9733616573436,2.00146596706261,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,3.61439152384566,1.50401373190767,1.44846518960824,0.795285947051099,0.486634870302636,0,0.443458794925128,0,0,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.51956613997496,0.397227542439656,0.286836620748814,1.41867352879343,0,1.06748995729705,0.49333509683432,0,0.269421344139376,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.816616685019573,0.491337269247072,0.723280468230358,1.18800285728205,0.741800787835671,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.717558542755448,1.2813443329114,0.847727604638247,0.900273288253207,0.515262646192195,1.28820270022815,2.97786970130544,0.337552664482532,0.584622030967192,0,1.19664868234989,0.484938170456436,1.77504796258307,0.503760491138201,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0.555530670951178,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0.857479297891735,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.857867961948885,1.08524321078289,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,2.15662369942424,3.44585807502342,0,0.723906533337896,0,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,1.24782516918484,2.3195768543631,1.26161932027148,0.702848489956279,0.902838299183157,0,0,0.664225598535437,0,0.521301686808497,0,0,0,0,0,0,0,0.604780586659361,2.97729369382532,1.38115775959256,4.2099014164961,1.28139149255701,2.04682899626681,1.93024705372329,0,0.154209693802656,0.355123450626254,0.410635780069046,1.03850885836724,0.232420756919918,0,0,0.644566922551274,1.37777337797528,2.00300284807389,1.44236856455367,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,3.21367859688319,0.580024309752732,0,0.15350367472613,0,0.751941714077915,0.435050081742686,0.170453254832202,0.890320356467374,0.826424576804891,0.384380134730212,0.127612712494584,0.809262246844399,2.32422774648643,0.62962469366128,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,1.71175595213568,0,0,0.539617372749944,0.823611089208164,0.235624804691373,0,0,0,0,0.974853958525138,0,0.136499911407986,1.97967604735198,0,0,1.32687795048244,0,0,1.31178950409327,0,0,0,0.143411352204052,0.491245205065606,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.20453736500431,0,2.17727711363265,0.0898683511473268,0,1.53471711068062,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.32681539055697,0,0.230850775511391,0,0,0.359030577639089,0.651884231532048,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0.39961921916426,0,0.114536596165916,0.171594997861965,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0.895528817321244,0,0,0.189403005275089,0.251567901752575,0.889811221596536,1.37304041038154,0.302461847526478,0.15543720058278,0,0,0.899606224327209,0,0,0.53168342911599,0,0,0,0,0.181848659202559,0.107410557042488,0.928067519756987,1.19428766609585,0.400027764663154,3.43395705182793,2.02049693259551,0,0,0,0,0,0,1.22368352253234,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,1.63804924423206,0.245772908753719,0.422624246717254,0,0.320075189082423,1.20550485762571,0,0,0.279759015438889,0,0.127894371303652,0,0.471797825567689,0,0.509197589862076,0,0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| ||
|short_description=p5@ALDH1L2 | |||
}} | }} |
Latest revision as of 01:00, 16 September 2015
Short description: | p5@ALDH1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALDH1L2_5end |
Coexpression cluster: | NA |
Association with transcript: | -381bp_to_AK094088_5end |
EntrezGene: | ALDH1L2 |
HGNC: | 26777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.34e-14 | 12 |
fibroblast | 2.80e-12 | 76 |
fibrocyte | 4.26e-12 | 3 |
preadipocyte of the breast | 4.26e-12 | 3 |
tendon cell | 4.26e-12 | 3 |
adipocyte of omentum tissue | 7.67e-12 | 3 |
omentum preadipocyte | 1.47e-11 | 3 |
fat cell | 1.77e-11 | 15 |
prostate stromal cell | 2.11e-11 | 3 |
stromal cell | 4.83e-09 | 28 |
adipocyte of breast | 1.15e-08 | 2 |
connective tissue cell | 9.30e-08 | 361 |
mesenchymal cell | 1.76e-07 | 354 |
multi fate stem cell | 1.85e-07 | 427 |
somatic stem cell | 3.24e-07 | 433 |
stem cell | 6.66e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.17e-21 | 6 |
peritoneum | 1.17e-21 | 6 |
abdominal cavity | 1.17e-21 | 6 |
visceral peritoneum | 1.17e-21 | 6 |
dense regular connective tissue | 4.26e-12 | 3 |
tendon | 4.26e-12 | 3 |
regular connective tissue | 4.26e-12 | 3 |
cavity lining | 1.73e-10 | 12 |
serous membrane | 1.73e-10 | 12 |
breast | 2.44e-09 | 10 |
chest | 1.87e-08 | 11 |
connective tissue | 2.67e-07 | 371 |