FFCP PHASE1:Hg19::chr18:28622680..28622694,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1825 | |EntrezGene=1825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3037 | |HGNC=3037 | ||
|TSSclassifier=strong | |||
|UniProt=Q14574 | |UniProt=Q14574 | ||
|association_with_transcript=86bp_to_ENST00000360428,ENST00000434452,NM_001941,NM_024423,uc002kwi.3,uc002kwj.3_5end | |association_with_transcript=86bp_to_ENST00000360428,ENST00000434452,NM_001941,NM_024423,uc002kwi.3,uc002kwj.3_5end | ||
|cluster_id=chr18:28622680..28622694,- | |||
|coexpression_cluster_id=C1302 | |||
|description=CAGE_peak_5_at_DSC3_5end | |description=CAGE_peak_5_at_DSC3_5end | ||
|id=chr18:28622680..28622694,- | |id=chr18:28622680..28622694,- | ||
|ontology_enrichment_celltype=CL:0002076!1.94e-18!43;CL:0000066!3.48e-15!254;CL:0000223!1.11e-12!59;CL:0002251!2.18e-11!21;CL:0000076!2.28e-10!62;CL:0002159!3.44e-09!13;CL:0002368!6.21e-09!13;CL:0000622!6.49e-08!5 | |ontology_enrichment_celltype=CL:0002076!1.94e-18!43;CL:0000066!3.48e-15!254;CL:0000223!1.11e-12!59;CL:0002251!2.18e-11!21;CL:0000076!2.28e-10!62;CL:0002159!3.44e-09!13;CL:0002368!6.21e-09!13;CL:0000622!6.49e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.19e-18;42!CL:0002251;9.16e-15;20!CL:0000622;1.35e-12;5!CL:0002368;1.45e-12;13!CL:0002159;4.57e-12;14!CL:0000154;2.11e-10;6!CL:0000150;2.45e-09;9!CL:0000244;2.61e-09;4!CL:0000731;2.61e-09;4!CL:0000349;2.84e-09;19!CL:0002623;1.25e-08;3!CL:0002621;8.24e-08;3!CL:0000307;3.43e-07;3!CL:0000076;8.81e-07;63!CL:0000240;9.31e-07;6!CL:0000311;9.31e-07;6!CL:0000079;9.31e-07;6!CL:0000237;9.31e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.75e-23,42;CL:0000066,5.28e-19,253;CL:0000223,5.12e-15,58;CL:0002251,9.31e-15,20;CL:0000076,1.08e-13,63;CL:0002368,1.07e-12,13;CL:0000622,1.39e-12,5;CL:0002159,5.44e-12,14;CL:0000154,2.15e-10,6;CL:0000244,2.12e-09,4;CL:0000731,2.12e-09,4;CL:0000349,2.33e-09,19;CL:0000150,2.51e-09,9;CL:0002623,1.26e-08,3;CL:0002621,9.25e-08,3;CL:0000068,2.89e-07,3;CL:0000069,2.89e-07,3;CL:0000307,2.89e-07,3;CL:0000377,2.89e-07,3;CL:0000240,9.97e-07,6;CL:0000311,9.97e-07,6;CL:0000079,9.97e-07,6;CL:0000237,9.97e-07,6;CL:0000036,9.97e-07,6;CL:0000357,9.97e-07,6;CL:0000114,9.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;6.92e-08;58!CL:0000377;3.43e-07;3!CL:0000357;9.31e-07;6!CL:0000114;9.31e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.45e-11!14 | |ontology_enrichment_disease=DOID:1749!1.45e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.59e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.30e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.53e-13!169;UBERON:0000925!3.53e-13!169;UBERON:0006595!3.53e-13!169;UBERON:0001004!1.48e-12!72;UBERON:0000161!3.40e-10!35;UBERON:0000478!1.51e-09!24;UBERON:0005631!2.90e-09!14;UBERON:0000158!2.90e-09!14;UBERON:0000065!2.98e-09!53;UBERON:0000166!6.20e-09!21;UBERON:0005910!9.66e-08!6;UBERON:0001007!9.96e-08!155;UBERON:0001555!9.96e-08!155;UBERON:0007026!9.96e-08!155;UBERON:0003729!2.83e-07!5;UBERON:0000165!6.88e-07!28;UBERON:0000930!6.88e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;9.77e-12;28!UBERON:0000486;6.14e-11;12!UBERON:0000161;7.18e-11;19!UBERON:0000166;7.18e-11;19!UBERON:0000478;4.85e-10;24!UBERON:0005631;6.54e-10;10!UBERON:0000158;6.54e-10;10!UBERON:0005910;3.68e-09;6!UBERON:0003729;3.93e-08;13!UBERON:0001949;8.24e-08;3!UBERON:0001723;1.00e-07;3!UBERON:0001033;1.00e-07;3!UBERON:0000305;1.62e-07;7!UBERON:0000365;1.96e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.26e-15,160;UBERON:0000925,1.26e-15,160;UBERON:0006595,1.26e-15,160;UBERON:0000161,3.42e-14,36;UBERON:0005631,2.30e-13,14;UBERON:0000158,2.30e-13,14;UBERON:0000166,2.36e-13,22;UBERON:0001004,1.71e-12,74;UBERON:0003102,8.97e-12,99;UBERON:0000165,3.21e-11,29;UBERON:0000930,3.21e-11,29;UBERON:0000478,4.28e-10,24;UBERON:0005910,2.98e-09,6;UBERON:0003729,4.14e-08,13;UBERON:0000033,5.04e-08,56;UBERON:0000153,8.92e-08,62;UBERON:0007811,8.92e-08,62;UBERON:0001949,9.25e-08,3;UBERON:0001723,9.91e-08,3;UBERON:0001033,9.91e-08,3;UBERON:0010056,9.91e-08,3;UBERON:0001007,1.13e-07,145;UBERON:0001555,1.13e-07,145;UBERON:0007026,1.13e-07,145;UBERON:0000305,1.27e-07,7;UBERON:0000065,1.47e-07,54;UBERON:0000365,1.67e-07,5;UBERON:0001444,2.14e-07,49;UBERON:0003124,2.35e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.9319446983431,1.84636884759917,0,0,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,2.71085326900425,0.739508020333575,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.130979075497713,4.00724817121796,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23312862571041,0,0,0,0,0,0,0,0,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,6.81865301477087,4.01526433544605,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,12.1822816803574,2.24803506515239,9.14813648945841,9.25884451585296,0,0,0,0,0.939269553886573,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,4.70349958956807,3.54437743105966,8.86629374758198,6.39394664730716,6.51750554580859,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,1.93907573636667,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,1.50719688529793,0.871533458600294,2.19940580600526,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,0,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60911646545913,4.05156351317944,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,1.13345112812495,0,0.082509499920588,5.74265537996172,3.25030123018261,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,4.62797763010739,3.65161127993702,5.99779748724545,8.19378024929954,0,0,0,0,0,0,0,0,0,0.632758849437452,0.571890581771475,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0.286822704408103,1.47373561519682,0,0,0,0,0,0,2.79044126903985,2.68120910214315,4.3556393944529,0.941438007767792,1.72202149068492,5.05414427002877,4.87773168890343,4.59446800413919,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,1.48482340416319,5.52889263778618,0,0,0.222617410045812,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17499872630438,5.23449862113298,0,0,0,0,0,0,0,0,0,0,0,0,28.0241725999993,1.92375646259493,0,0,0.628303510868405,0,4.46601623624687,0.549585560411174,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.494255755786011,0.417687798021821,0,0,0,0,0.978323094660449,0,0,0,0,0.126373159256976,0.450970258243478,2.38482840213668,0,0,0,0,0,0,0,10.2892017285097,0.609414446062818,0.698906672968121,0,0,0,0,10.4748137807493,0,1.12990370390266,0,0,0,0,0,0,0.599428828746391,0,0.916292769327325,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.201550417460179,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0.2249738915515,6.96421759102155,0,31.530860634331,0,0,1.5840050477911,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0.414239055347196,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.751288044986092,0.380805212168795,0.406870733204662,0,0.537052785212442,0,0,0,0,0,0,0,3.64550705337374,0.782982875895635,0,0.463044948647668,0,0,0,1.75427239662966,0.353378291891762,1.15748422962549,0,0,1.38172136692479,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,9.37192701720278,6.22077260032973,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.63699922809025,0.943757786781923,7.52057253938884,2.4260389891571,0,0,0,0.0752103283492573,0,0,0,2.12903492763126,0,0,0,0,0,0,0,5.45832296228224,0,1.66091155931474,0,0,0,0,1.33053555243958,0,0,0,0,0,1.00108261702862,1.17739639275771,0,2.80272163313789,0,0,0,0.0714765441766563,0,0,0,0,11.8113213572931,19.8033433428982,17.9727512071664,0,0,0,0.423387050190929,0.4582137370881,0.31020638566432,0,0,0.098150233615243,0,0,0,0,10.1999308542419,0,0,0,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96409332466223,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0.322944549180031,0.496597714366863,1.34558235096736,0,0,13.9338718654055,4.44903291410865,4.98405192307948,2.07994395638761,0,0.407016343054873,2.66818364694289,0,0,2.34640942403454,0.244482888365733,2.84827324821017,1.33151354837103,0.402547587182052,0.320568492303233 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| ||
|short_description=p5@DSC3 | |short_description=p5@DSC3 | ||
}} | }} |
Latest revision as of 04:26, 19 September 2015
Short description: | p5@DSC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DSC3_5end |
Coexpression cluster: | C1302_keratoacanthoma_cervical_immature_salivary_malignant_oral_Keratinocyte |
Association with transcript: | 86bp_to_ENST00000360428, ENST00000434452, NM_001941, NM_024423, uc002kwi.3, uc002kwj.3_5end |
EntrezGene: | DSC3 |
HGNC: | 3037 |
UniProt: | Q14574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.75e-23 | 42 |
epithelial cell | 5.28e-19 | 253 |
endodermal cell | 5.12e-15 | 58 |
epithelial cell of alimentary canal | 9.31e-15 | 20 |
squamous epithelial cell | 1.08e-13 | 63 |
respiratory epithelial cell | 1.07e-12 | 13 |
acinar cell | 1.39e-12 | 5 |
general ecto-epithelial cell | 5.44e-12 | 14 |
protein secreting cell | 2.15e-10 | 6 |
transitional epithelial cell | 2.12e-09 | 4 |
urothelial cell | 2.12e-09 | 4 |
extraembryonic cell | 2.33e-09 | 19 |
glandular epithelial cell | 2.51e-09 | 9 |
acinar cell of salivary gland | 1.26e-08 | 3 |
gingival epithelial cell | 9.25e-08 | 3 |
duct epithelial cell | 2.89e-07 | 3 |
branched duct epithelial cell | 2.89e-07 | 3 |
tracheal epithelial cell | 2.89e-07 | 3 |
tracheoblast | 2.89e-07 | 3 |
stratified squamous epithelial cell | 9.97e-07 | 6 |
keratin accumulating cell | 9.97e-07 | 6 |
stratified epithelial cell | 9.97e-07 | 6 |
keratinizing barrier epithelial cell | 9.97e-07 | 6 |
epithelial fate stem cell | 9.97e-07 | 6 |
stratified epithelial stem cell | 9.97e-07 | 6 |
surface ectodermal cell | 9.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.26e-15 | 160 |
endoderm | 1.26e-15 | 160 |
presumptive endoderm | 1.26e-15 | 160 |
orifice | 3.42e-14 | 36 |
extraembryonic membrane | 2.30e-13 | 14 |
membranous layer | 2.30e-13 | 14 |
oral opening | 2.36e-13 | 22 |
respiratory system | 1.71e-12 | 74 |
surface structure | 8.97e-12 | 99 |
mouth | 3.21e-11 | 29 |
stomodeum | 3.21e-11 | 29 |
extraembryonic structure | 4.28e-10 | 24 |
transitional epithelium | 2.98e-09 | 6 |
mouth mucosa | 4.14e-08 | 13 |
head | 5.04e-08 | 56 |
anterior region of body | 8.92e-08 | 62 |
craniocervical region | 8.92e-08 | 62 |
gingival epithelium | 9.25e-08 | 3 |
tongue | 9.91e-08 | 3 |
gustatory system | 9.91e-08 | 3 |
future tongue | 9.91e-08 | 3 |
digestive system | 1.13e-07 | 145 |
digestive tract | 1.13e-07 | 145 |
primitive gut | 1.13e-07 | 145 |
amnion | 1.27e-07 | 7 |
respiratory tract | 1.47e-07 | 54 |
urothelium | 1.67e-07 | 5 |
subdivision of head | 2.14e-07 | 49 |
chorion | 2.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.30e-14 | 14 |