FFCP PHASE1:Hg19::chr12:104674604..104674628,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:104674604..104674628,-
|short_description=p1@ENST00000549807
|description=CAGE_peak_1_at_ENST00000549807_5end
|association_with_transcript=-104bp_to_ENST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-104bp_to_ENST00000549807_5end | |||
|cluster_id=chr12:104674604..104674628,- | |||
|coexpression_cluster_id=C1655 | |||
|description=CAGE_peak_1_at_ENST00000549807_5end | |||
|id=chr12:104674604..104674628,- | |||
|ontology_enrichment_celltype=CL:0000066!3.17e-18!254;CL:0000076!1.58e-16!62;CL:0000548!4.16e-15!679;CL:0000004!4.16e-15!679;CL:0000255!4.16e-15!679;CL:0000012!1.01e-14!682;CL:0000077!1.01e-14!19;CL:0000063!2.17e-11!578;CL:0000213!2.95e-11!57;CL:0000215!2.95e-11!57;CL:0000003!5.77e-10!722;CL:0000222!4.80e-09!119;CL:0000057!5.41e-09!75;CL:0000220!6.29e-08!246;CL:0002321!1.13e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.25e-27;19!CL:0000076;1.94e-08;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.85e-27,19;CL:0000076,2.31e-16,63;CL:0000066,2.75e-12,253;CL:0000213,1.63e-11,58;CL:0000215,1.63e-11,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.89e-16!106;DOID:0050687!1.49e-14!143;DOID:14566!8.58e-12!239;DOID:162!2.38e-10!235;DOID:1749!4.89e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.13e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.87e-14,239;DOID:162,5.19e-13,235;DOID:305,1.61e-12,106;DOID:0050687,4.81e-12,143;DOID:1749,4.36e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.67e-08!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000549807 | |||
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Latest revision as of 04:17, 24 July 2015
Short description: | p1@ENST00000549807 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000549807_5end |
Coexpression cluster: | C1655_large_mesothelioma_Fibroblast_giant_oral_mesenchymal_mucinous |
Association with transcript: | -104bp_to_ENST00000549807_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.85e-27 | 19 |
squamous epithelial cell | 2.31e-16 | 63 |
epithelial cell | 2.75e-12 | 253 |
lining cell | 1.63e-11 | 58 |
barrier cell | 1.63e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.87e-14 | 239 |
cancer | 5.19e-13 | 235 |
carcinoma | 1.61e-12 | 106 |
cell type cancer | 4.81e-12 | 143 |
squamous cell carcinoma | 4.36e-09 | 14 |