FFCP PHASE1:Hg19::chr12:10320256..10320267,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:10320256..10320267,-
|short_description=p8@OLR1
|description=CAGE_peak_8_at_OLR1_5end
|association_with_transcript=0bp_to_ENST00000538745_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4973 | |EntrezGene=4973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8133 | |HGNC=8133 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3G7 | |UniProt=F5H3G7 | ||
|association_with_transcript=0bp_to_ENST00000538745_5end | |||
|cluster_id=chr12:10320256..10320267,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_OLR1_5end | |||
|id=chr12:10320256..10320267,- | |||
|ontology_enrichment_celltype=CL:0000860!2.18e-43!45;CL:0002057!4.49e-42!42;CL:0002194!8.15e-35!63;CL:0000576!8.15e-35!63;CL:0000040!8.15e-35!63;CL:0000559!8.15e-35!63;CL:0002009!2.15e-33!65;CL:0000839!3.38e-30!70;CL:0000557!1.30e-29!71;CL:0000766!1.33e-28!76;CL:0002087!4.06e-16!119;CL:0000763!8.68e-16!112;CL:0000049!8.68e-16!112;CL:0002031!4.25e-14!124;CL:0000738!7.07e-13!140;CL:0002032!1.13e-08!165;CL:0000837!1.13e-08!165;CL:0000037!1.69e-08!172;CL:0000566!1.69e-08!172;CL:0000988!1.75e-07!182;CL:0002541!1.99e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-134;33!CL:0002057;2.56e-134;33!CL:0000473;9.65e-92;39!CL:0000234;9.65e-92;39!CL:0000576;3.39e-59;48!CL:0000766;1.43e-33;69!CL:0000763;9.84e-16;100!CL:0002087;3.04e-15;104!CL:0002541;1.11e-09;3!CL:0000738;3.14e-09;136 | |||
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|ontology_enrichment_development_v019=CL:0002057;3.30e-83;42!CL:0000049;8.67e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.17e-25!80;UBERON:0001474!1.73e-22!86;UBERON:0002390!1.50e-20!102;UBERON:0003061!1.50e-20!102;UBERON:0004765!1.03e-18!101;UBERON:0001434!1.03e-18!101;UBERON:0002405!3.56e-18!115;UBERON:0002193!1.11e-17!112;UBERON:0000062!2.38e-14!511;UBERON:0001049!2.84e-11!57;UBERON:0005068!2.84e-11!57;UBERON:0006241!2.84e-11!57;UBERON:0007135!2.84e-11!57;UBERON:0002780!3.00e-10!41;UBERON:0001890!3.00e-10!41;UBERON:0006240!3.00e-10!41;UBERON:0001893!3.90e-10!34;UBERON:0000955!5.50e-10!69;UBERON:0006238!5.50e-10!69;UBERON:0001017!6.11e-10!82;UBERON:0003080!6.67e-10!42;UBERON:0002616!1.17e-09!59;UBERON:0002791!3.00e-09!33;UBERON:0005743!3.65e-09!86;UBERON:0002204!3.81e-09!167;UBERON:0002020!7.76e-09!34;UBERON:0003528!7.76e-09!34;UBERON:0000467!2.50e-08!625;UBERON:0000480!2.82e-08!626;UBERON:0001869!4.66e-08!32;UBERON:0000923!1.08e-07!604;UBERON:0005291!1.08e-07!604;UBERON:0006598!1.08e-07!604;UBERON:0002532!1.08e-07!604;UBERON:0000073!1.12e-07!94;UBERON:0001016!1.12e-07!94;UBERON:0002050!1.21e-07!605;UBERON:0005423!1.21e-07!605;UBERON:0000476!1.99e-07!3;UBERON:0000920!1.99e-07!3;UBERON:0000922!2.73e-07!612;UBERON:0007023!2.86e-07!115;UBERON:0000468!3.74e-07!659;UBERON:0003075!6.62e-07!86;UBERON:0007284!6.62e-07!86;UBERON:0002619!6.99e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.11e-09;3!UBERON:0000920;1.11e-09;3!UBERON:0002336;2.24e-07;1!UBERON:0011215;2.24e-07;1!UBERON:0001018;2.24e-07;1!UBERON:0002473;2.24e-07;1!UBERON:0005340;2.24e-07;1!UBERON:0003544;2.24e-07;1!UBERON:0005970;2.24e-07;1!UBERON:0002316;2.24e-07;1!UBERON:0001020;2.24e-07;1!UBERON:0002437;2.24e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.07e-59,76;UBERON:0001474,2.53e-54,82;UBERON:0004765,4.16e-49,90;UBERON:0002405,2.22e-47,93;UBERON:0002390,9.84e-45,98;UBERON:0003061,9.84e-45,98;UBERON:0001434,9.52e-44,100;UBERON:0002193,3.63e-40,108;UBERON:0002204,2.91e-24,167;UBERON:0003081,4.61e-19,203;UBERON:0000926,1.83e-11,315;UBERON:0004120,1.83e-11,315;UBERON:0006603,1.83e-11,315;UBERON:0002384,6.30e-11,371;UBERON:0000920,9.14e-10,3;UBERON:0002336,2.63e-07,1;UBERON:0011215,2.63e-07,1;UBERON:0001018,2.63e-07,1;UBERON:0002473,2.63e-07,1;UBERON:0005340,2.63e-07,1;UBERON:0003544,2.63e-07,1;UBERON:0005970,2.63e-07,1;UBERON:0002316,2.63e-07,1;UBERON:0001020,2.63e-07,1;UBERON:0002437,2.63e-07,1 | |||
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| ||
|short_description=p8@OLR1 | |||
}} | }} |
Latest revision as of 21:39, 15 September 2015
Short description: | p8@OLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_OLR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000538745_5end |
EntrezGene: | OLR1 |
HGNC: | 8133 |
UniProt: | F5H3G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.77e-112 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.77e-112 | 42 |
defensive cell | 1.59e-97 | 48 |
phagocyte | 1.59e-97 | 48 |
monopoietic cell | 4.81e-77 | 59 |
monocyte | 4.81e-77 | 59 |
monoblast | 4.81e-77 | 59 |
promonocyte | 4.81e-77 | 59 |
macrophage dendritic cell progenitor | 2.12e-74 | 61 |
myeloid lineage restricted progenitor cell | 1.76e-68 | 66 |
granulocyte monocyte progenitor cell | 2.12e-67 | 67 |
myeloid leukocyte | 1.91e-62 | 72 |
myeloid cell | 3.63e-40 | 108 |
common myeloid progenitor | 3.63e-40 | 108 |
nongranular leukocyte | 1.95e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 1.11e-35 | 120 |
leukocyte | 6.44e-31 | 136 |
hematopoietic oligopotent progenitor cell | 2.36e-25 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-25 | 161 |
hematopoietic stem cell | 4.35e-24 | 168 |
hematopoietic cell | 1.31e-22 | 177 |
mesenchymal cell | 1.02e-11 | 354 |
connective tissue cell | 2.20e-11 | 361 |
motile cell | 3.33e-10 | 386 |
chorionic membrane mesenchymal stem cell | 9.14e-10 | 3 |
multi fate stem cell | 9.31e-09 | 427 |
somatic stem cell | 1.47e-08 | 433 |
stem cell | 2.67e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.07e-59 | 76 |
bone element | 2.53e-54 | 82 |
skeletal element | 4.16e-49 | 90 |
immune system | 2.22e-47 | 93 |
hematopoietic system | 9.84e-45 | 98 |
blood island | 9.84e-45 | 98 |
skeletal system | 9.52e-44 | 100 |
hemolymphoid system | 3.63e-40 | 108 |
musculoskeletal system | 2.91e-24 | 167 |
lateral plate mesoderm | 4.61e-19 | 203 |
mesoderm | 1.83e-11 | 315 |
mesoderm-derived structure | 1.83e-11 | 315 |
presumptive mesoderm | 1.83e-11 | 315 |
connective tissue | 6.30e-11 | 371 |
egg chorion | 9.14e-10 | 3 |
corpus callosum | 2.63e-07 | 1 |
central nervous system cell part cluster | 2.63e-07 | 1 |
axon tract | 2.63e-07 | 1 |
intercerebral commissure | 2.63e-07 | 1 |
dorsal telencephalic commissure | 2.63e-07 | 1 |
brain white matter | 2.63e-07 | 1 |
brain commissure | 2.63e-07 | 1 |
white matter | 2.63e-07 | 1 |
nervous system commissure | 2.63e-07 | 1 |
cerebral hemisphere white matter | 2.63e-07 | 1 |