FFCP PHASE1:Hg19::chr11:9685717..9685723,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:9685717..9685723,+
|short_description=p5@SWAP70
|description=CAGE_peak_5_at_SWAP70_5end
|association_with_transcript=35bp_to_ENST00000524817_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23075 | |EntrezGene=23075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17070 | |HGNC=17070 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_ENST00000524817_5end | |||
|cluster_id=chr11:9685717..9685723,+ | |||
|coexpression_cluster_id=C1651 | |||
|description=CAGE_peak_5_at_SWAP70_5end | |||
|id=chr11:9685717..9685723,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.03e-11!24;CL:0000115!2.55e-10!35;CL:0000945!2.32e-09!24;CL:0000826!2.32e-09!24;CL:0000236!1.10e-08!14;CL:0002078!1.70e-08!44;CL:0000222!2.18e-08!119;CL:0000071!4.18e-08!18;CL:0002546!4.18e-08!18;CL:0000213!5.69e-08!57;CL:0000215!5.69e-08!57;CL:0002371!9.83e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.63e-22;24!CL:1000413;1.36e-15;9!CL:0000236;1.76e-14;13!CL:0000453;2.98e-14;5!CL:0000071;4.63e-13;18!CL:0000945;1.98e-12;24!CL:0000115;1.15e-11;36!CL:0002138;3.14e-11;6!CL:0002544;5.94e-11;6!CL:0002545;4.84e-09;2!CL:0000990;6.37e-08;8!CL:0002078;1.04e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.67e-21,24;CL:1000413,4.71e-16,9;CL:0000453,2.70e-14,5;CL:0000236,1.18e-13,14;CL:0000115,1.76e-13,36;CL:0000071,3.42e-13,18;CL:0002546,3.42e-13,18;CL:0000945,1.25e-12,24;CL:0000826,1.25e-12,24;CL:0002544,5.01e-11,6;CL:0005020,1.07e-10,6;CL:0002138,1.07e-10,6;CL:0005022,1.07e-10,6;CL:0002078,2.75e-10,45;CL:0002545,5.10e-09,2;CL:0000213,6.91e-09,58;CL:0000215,6.91e-09,58;CL:0000990,6.04e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002546;4.63e-13;18!CL:0005022;3.14e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.41e-14!79;UBERON:0007798!4.41e-14!79;UBERON:0000055!2.25e-13!69;UBERON:0001981!7.97e-12!60;UBERON:0007500!7.97e-12!60;UBERON:0004537!7.97e-12!60;UBERON:0006965!7.97e-12!60;UBERON:0004872!1.18e-10!84;UBERON:0001637!1.32e-09!42;UBERON:0003509!1.32e-09!42;UBERON:0004572!1.32e-09!42;UBERON:0001009!2.72e-09!113;UBERON:0004535!3.87e-09!110;UBERON:0001986!4.18e-08!18;UBERON:0004638!4.18e-08!18;UBERON:0004852!4.18e-08!18;UBERON:0004573!1.73e-07!33;UBERON:0004571!1.73e-07!33;UBERON:0006914!2.28e-07!25;UBERON:0000947!4.63e-07!21;UBERON:0010191!4.63e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;1.36e-15;9!UBERON:0004700;1.36e-15;9!UBERON:0001917;1.36e-15;9!UBERON:0000487;3.21e-13;22!UBERON:0004638;4.63e-13;18!UBERON:0001986;4.63e-13;18!UBERON:0004852;4.63e-13;18!UBERON:0006914;1.93e-11;25!UBERON:0005800;4.84e-09;2!UBERON:0001515;4.84e-09;2!UBERON:0001473;1.96e-08;8!UBERON:0004536;1.96e-08;8!UBERON:0006558;1.96e-08;8!UBERON:0000055;5.94e-08;65!UBERON:0000490;9.04e-08;33!UBERON:0001637;1.20e-07;42!UBERON:0003509;1.20e-07;42!UBERON:0004572;1.20e-07;42!UBERON:0004573;5.41e-07;33!UBERON:0004571;5.41e-07;33!UBERON:0002465;9.46e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,4.71e-16,9;UBERON:0004700,4.71e-16,9;UBERON:0001917,4.71e-16,9;UBERON:0000487,2.03e-13,22;UBERON:0004638,3.42e-13,18;UBERON:0001986,3.42e-13,18;UBERON:0004852,3.42e-13,18;UBERON:0000055,4.56e-13,68;UBERON:0006914,1.30e-11,25;UBERON:0002049,6.75e-11,78;UBERON:0007798,6.75e-11,78;UBERON:0001637,1.40e-09,42;UBERON:0003509,1.40e-09,42;UBERON:0004572,1.40e-09,42;UBERON:0005800,5.10e-09,2;UBERON:0001515,5.10e-09,2;UBERON:0007500,8.70e-09,59;UBERON:0001981,8.70e-09,59;UBERON:0004537,8.70e-09,59;UBERON:0006965,8.70e-09,59;UBERON:0001473,4.83e-08,8;UBERON:0004536,4.83e-08,8;UBERON:0006558,4.83e-08,8;UBERON:0004535,9.39e-07,109 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,1.46379839637152,0,0.204000691244253,0,0,0,0.125542639594803,0.458480434487708,0.492603536699674,0.314843125254717,0.393364276848904,0,0.154816123316076,0,0,0,0.542270404062111,3.12772311472327,0,0,0,0,0.223915474239924,0.971680998056939,0,0.290796477559129,0.755751887377619,0.242584061187816,0.232429036905685,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,1.09162460023138,0.224723484445085,0,0.320929027076094,0.639337125799041,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0.570025487482497,0,0.365328307529268,1.75996244461323,0.546138611262131,1.77901850772711,0.426730222566507,1.20118796110804,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,2.93618594685469,1.52909291250092,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.511450247374121,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0.97364218096405,0.348259474598534,0.132957960518865,0,0,0,0.993812036833525,1.72046919021225,0,1.13061588384802,1.67799774483962,1.92582629358047,0.835979866147242,0.775250277507987,1.06729878806013,3.3472061276467,1.20848795132744,0,0.732186172644509,1.10298924103761,1.62028389576352,0.803697554556718,0.44905874525234,1.0135033243499,0,0.949265659568129,0.549605231791222,0,0,0,0,0.506522046658319,0.662045904066094,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0,0.134710672069688,0.817309515567294,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0,0,0,0.741800787835671,0,0,0.336672227908132,0,0.554128230968366,0,0,0.150238058906597,0.453728732640084,0.538168907066586,0.213557388818567,0.847727604638247,0.300091096084402,0.92747276314595,0,1.11670113798954,0.506328996723799,0.68205903612839,0.757301322732344,1.10459878370759,1.45481451136931,0.710019185033229,0.604512589365842,0.169560592310488,0.193260853163297,1.09098448236334,0.573609190778008,0.243947412259191,0,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0,0.337169380156203,0.482022059766964,0.330881918197182,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0.548751427043128,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,1.01056513432752,0.462985512576611,1.14152491340759,0.790204397959275,0,0.246217006087397,0.936017060556951,0.148631162288728,0,0.335964256397719,0.425325291727159,0,0.290633938513962,0,1.47798971368783,0.968532774145487,0,0.144119953416961,0.25248486685276,0.253991577168676,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.623912584592421,0.178428988797162,0.473107245101804,0.117141414992713,0.601892199455438,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0.496215615637554,1.68808170616869,0.561320188866147,0.768834895534206,3.58195074346692,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0.340187410553031,0.647747748306418,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.460511024178389,0.275673144969061,0.214840489736547,0,0.170453254832202,0.178064071293475,0,0.192190067365106,0.255225424989168,0,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,0,0,1.29726953372744,0.572499546967965,0.372158369359667,0,0,0,0.855877976067841,0,0.78494864019923,0.179872457583315,0,0.353437207037059,0.606547444719948,0,0.421258456238981,0,1.21856744815642,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,1.69017361519345,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.987884678879706,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.188287601553558,0,1.68471475667626,0,0,0,0,0,0.476463550915578,0,0,0,0,0.427296284509893,0.962479855263359,0,0.371606350251437,0.144269212976445,0,0,0,0.5745161103971,0,0.324621940274555,0,0,0,0,0.846458889008016,0,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0,0.492339221844278,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.455173793141999,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0,0.41827123283581,0,0,0,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| ||
|short_description=p5@SWAP70 | |||
}} | }} |
Latest revision as of 06:19, 25 September 2015
Short description: | p5@SWAP70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SWAP70_5end |
Coexpression cluster: | C1651_migratory_Burkitt_lymphoma_CD19_immature_epithelioid_Adipocyte |
Association with transcript: | 35bp_to_ENST00000524817_5end |
EntrezGene: | SWAP70 |
HGNC: | 17070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.67e-21 | 24 |
endothelial cell of artery | 4.71e-16 | 9 |
Langerhans cell | 2.70e-14 | 5 |
B cell | 1.18e-13 | 14 |
endothelial cell | 1.76e-13 | 36 |
blood vessel endothelial cell | 3.42e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.42e-13 | 18 |
lymphocyte of B lineage | 1.25e-12 | 24 |
pro-B cell | 1.25e-12 | 24 |
aortic endothelial cell | 5.01e-11 | 6 |
lymphangioblast | 1.07e-10 | 6 |
endothelial cell of lymphatic vessel | 1.07e-10 | 6 |
vascular lymphangioblast | 1.07e-10 | 6 |
meso-epithelial cell | 2.75e-10 | 45 |
thoracic aorta endothelial cell | 5.10e-09 | 2 |
lining cell | 6.91e-09 | 58 |
barrier cell | 6.91e-09 | 58 |
conventional dendritic cell | 6.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 4.71e-16 | 9 |
arterial system endothelium | 4.71e-16 | 9 |
endothelium of artery | 4.71e-16 | 9 |
simple squamous epithelium | 2.03e-13 | 22 |
blood vessel endothelium | 3.42e-13 | 18 |
endothelium | 3.42e-13 | 18 |
cardiovascular system endothelium | 3.42e-13 | 18 |
vessel | 4.56e-13 | 68 |
squamous epithelium | 1.30e-11 | 25 |
vasculature | 6.75e-11 | 78 |
vascular system | 6.75e-11 | 78 |
artery | 1.40e-09 | 42 |
arterial blood vessel | 1.40e-09 | 42 |
arterial system | 1.40e-09 | 42 |
segment of aorta | 5.10e-09 | 2 |
thoracic aorta | 5.10e-09 | 2 |
epithelial tube open at both ends | 8.70e-09 | 59 |
blood vessel | 8.70e-09 | 59 |
blood vasculature | 8.70e-09 | 59 |
vascular cord | 8.70e-09 | 59 |
lymphatic vessel | 4.83e-08 | 8 |
lymph vasculature | 4.83e-08 | 8 |
lymphatic part of lymphoid system | 4.83e-08 | 8 |
cardiovascular system | 9.39e-07 | 109 |