FFCP PHASE1:Hg19::chr11:95523621..95523710,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:95523621..95523710,+
|short_description=p1@CEP57
|description=CAGE_peak_1_at_CEP57_5end
|association_with_transcript=0bp_to_ENST00000325486,ENST0000032554...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9702 | |EntrezGene=9702 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30794 | |HGNC=30794 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XR8,F5H7J4,F5GZ93,F5H6R3,F5GXS6,F5H1B0,F5H0C6,F5H5F7 | |UniProt=Q86XR8,F5H7J4,F5GZ93,F5H6R3,F5GXS6,F5H1B0,F5H0C6,F5H5F7 | ||
|association_with_transcript=0bp_to_ENST00000325486,ENST00000325542,ENST00000535497,ENST00000538095,ENST00000539855,ENST00000540830,ENST00000541365,ENST00000544522,NM_001243776,NM_001243777,NM_014679,uc001pfo.1,uc001pfp.1,uc001pfq.1,uc001pfr.1,uc009ywn.1,uc010ruh.1,uc010rui.1_5end | |||
|cluster_id=chr11:95523621..95523710,+ | |||
|description=CAGE_peak_1_at_CEP57_5end | |||
|id=chr11:95523621..95523710,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.39e-12!53;CL:0000051!4.39e-12!53;CL:0000838!4.46e-12!52;CL:0000037!7.45e-09!172;CL:0000566!7.45e-09!172;CL:0002032!4.89e-08!165;CL:0000837!4.89e-08!165;CL:0000988!1.81e-07!182;CL:0000084!4.80e-07!25;CL:0000827!4.80e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.83e-07;53!CL:0000084;4.70e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.39e-12,53;CL:0000051,4.39e-12,53;CL:0000838,4.46e-12,52;CL:0000037,2.68e-08,168;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000988,2.72e-07,177;CL:0000084,4.80e-07,25;CL:0000827,4.80e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;2.83e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.00e-29!235;DOID:14566!1.22e-28!239;DOID:0050687!3.81e-20!143;DOID:0050686!4.36e-14!137;DOID:305!9.68e-14!106;DOID:2531!4.32e-12!51;DOID:0060083!4.32e-12!51;DOID:1240!1.45e-11!39;DOID:3095!1.75e-09!22;DOID:2994!1.75e-09!22;DOID:8692!2.92e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.90e-09;22!DOID:2994;1.90e-09;22!DOID:1240;3.87e-09;39!DOID:8692;4.24e-09;31!DOID:2531;3.61e-08;51!DOID:0060083;3.61e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.00e-29,235;DOID:14566,1.22e-28,239;DOID:0050687,3.81e-20,143;DOID:0050686,4.36e-14,137;DOID:305,9.68e-14,106;DOID:2531,4.32e-12,51;DOID:0060083,4.32e-12,51;DOID:1240,1.45e-11,39;DOID:3095,1.75e-09,22;DOID:2994,1.75e-09,22;DOID:8692,2.92e-09,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CEP57 | |||
}} | }} |
Latest revision as of 04:58, 25 September 2015
Short description: | p1@CEP57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEP57_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325486, ENST00000325542, ENST00000535497, ENST00000538095, ENST00000539855, ENST00000540830, ENST00000541365, ENST00000544522, NM_001243776, NM_001243777, NM_014679, uc001pfo.1, uc001pfp.1, uc001pfq.1, uc001pfr.1, uc009ywn.1, uc010ruh.1, uc010rui.1_5end |
EntrezGene: | CEP57 |
HGNC: | 30794 |
UniProt: | Q86XR8F5H7J4F5GZ93F5H6R3F5GXS6F5H1B0F5H0C6F5H5F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.39e-12 | 53 |
common lymphoid progenitor | 4.39e-12 | 53 |
lymphoid lineage restricted progenitor cell | 4.46e-12 | 52 |
hematopoietic stem cell | 2.68e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic cell | 2.72e-07 | 177 |
T cell | 4.80e-07 | 25 |
pro-T cell | 4.80e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.00e-29 | 235 |
disease of cellular proliferation | 1.22e-28 | 239 |
cell type cancer | 3.81e-20 | 143 |
organ system cancer | 4.36e-14 | 137 |
carcinoma | 9.68e-14 | 106 |
hematologic cancer | 4.32e-12 | 51 |
immune system cancer | 4.32e-12 | 51 |
leukemia | 1.45e-11 | 39 |
germ cell and embryonal cancer | 1.75e-09 | 22 |
germ cell cancer | 1.75e-09 | 22 |
myeloid leukemia | 2.92e-09 | 31 |