FFCP PHASE1:Hg19::chr2:16080823..16080836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4613 | |EntrezGene=4613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7559 | |HGNC=7559 | ||
|TSSclassifier=strong | |||
|UniProt=P04198,B4DRZ1 | |UniProt=P04198,B4DRZ1 | ||
|association_with_transcript=137bp_to_ENST00000281043,ENST00000426211_5end | |association_with_transcript=137bp_to_ENST00000281043,ENST00000426211_5end | ||
|cluster_id=chr2:16080823..16080836,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_5_at_MYCN_5end | |description=CAGE_peak_5_at_MYCN_5end | ||
|id=chr2:16080823..16080836,+ | |id=chr2:16080823..16080836,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.92e-09!5;CL:0000039!3.37e-08!7;CL:0000586!3.37e-08!7;CL:0000047!3.57e-08!8;CL:0000540!6.89e-08!6;CL:0000031!6.89e-08!6;CL:0000404!6.89e-08!6 | |ontology_enrichment_celltype=CL:0002322!1.92e-09!5;CL:0000039!3.37e-08!7;CL:0000586!3.37e-08!7;CL:0000047!3.57e-08!8;CL:0000540!6.89e-08!6;CL:0000031!6.89e-08!6;CL:0000404!6.89e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002321;1.02e-18;15!CL:0002322;1.41e-18;5!CL:0000540;3.29e-16;6!CL:0000404;3.29e-16;6!CL:0000333;5.06e-12;5!CL:0002319;1.61e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.18e-18,5;CL:0000047,1.21e-18,8;CL:0000540,3.04e-16,6;CL:0000031,3.04e-16,6;CL:0000404,3.04e-16,6;CL:0000133,6.22e-10,59;CL:0000221,7.83e-08,72;CL:0002319,1.56e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.29e-16;6!UBERON:0003056;5.62e-09;3!UBERON:0005425;4.60e-07;1 | |||
|ontology_enrichment_disease=DOID:3095!6.99e-09!22;DOID:2994!6.99e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:169;4.29e-10;6!DOID:3095;8.82e-07;22!DOID:2994;8.82e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.30e-10,6;DOID:3095,9.28e-07,22;DOID:2994,9.28e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.18e-36!94;UBERON:0001016!2.18e-36!94;UBERON:0001017!9.51e-35!82;UBERON:0005743!6.38e-34!86;UBERON:0001049!2.32e-32!57;UBERON:0005068!2.32e-32!57;UBERON:0006241!2.32e-32!57;UBERON:0007135!2.32e-32!57;UBERON:0001893!3.12e-30!34;UBERON:0002780!5.76e-30!41;UBERON:0001890!5.76e-30!41;UBERON:0006240!5.76e-30!41;UBERON:0003080!4.95e-29!42;UBERON:0002791!6.03e-29!33;UBERON:0000955!7.09e-28!69;UBERON:0006238!7.09e-28!69;UBERON:0001869!1.40e-27!32;UBERON:0002020!1.52e-27!34;UBERON:0003528!1.52e-27!34;UBERON:0002616!3.73e-27!59;UBERON:0000956!1.23e-23!25;UBERON:0000203!1.23e-23!25;UBERON:0003056!7.61e-23!61;UBERON:0002619!1.57e-22!22;UBERON:0003075!1.97e-22!86;UBERON:0007284!1.97e-22!86;UBERON:0002346!7.13e-21!90;UBERON:0001950!9.36e-20!20;UBERON:0007023!2.62e-19!115;UBERON:0004121!2.54e-17!169;UBERON:0000924!1.50e-16!173;UBERON:0006601!1.50e-16!173;UBERON:0000153!6.72e-16!129;UBERON:0007811!6.72e-16!129;UBERON:0000033!1.67e-14!123;UBERON:0001871!1.04e-12!7;UBERON:0000473!1.27e-08!8;UBERON:0000349!1.87e-08!5;UBERON:0002420!6.72e-08!9;UBERON:0007245!6.72e-08!9;UBERON:0010009!6.72e-08!9;UBERON:0010011!6.72e-08!9;UBERON:0000454!6.72e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.84e-12;2!UBERON:0000122;1.84e-12;2!UBERON:0000013;5.06e-12;5!UBERON:0002410;5.06e-12;5!UBERON:0002619;8.98e-12;22!UBERON:0000010;3.32e-11;8!UBERON:0000956;2.58e-10;25!UBERON:0000203;2.58e-10;25!UBERON:0001950;1.08e-09;20!UBERON:0000922;4.19e-09;49!UBERON:0002780;7.18e-09;41!UBERON:0001890;7.18e-09;41!UBERON:0001893;2.11e-08;34!UBERON:0001871;4.12e-08;6!UBERON:0001016;6.23e-08;83!UBERON:0001869;2.28e-07;32!UBERON:0002791;2.49e-07;32!UBERON:0003528;4.19e-07;34!UBERON:0002020;4.19e-07;34!UBERON:0002902;4.60e-07;1!UBERON:0002336;4.60e-07;1!UBERON:0000941;4.60e-07;1!UBERON:0001785;4.60e-07;1!UBERON:0002464;4.60e-07;1!UBERON:0004904;4.60e-07;1!UBERON:0011215;4.60e-07;1!UBERON:0001018;4.60e-07;1!UBERON:0001021;4.60e-07;1!UBERON:0002473;4.60e-07;1!UBERON:0005340;4.60e-07;1!UBERON:0003544;4.60e-07;1!UBERON:0005970;4.60e-07;1!UBERON:0009899;4.60e-07;1!UBERON:0002316;4.60e-07;1!UBERON:0001020;4.60e-07;1!UBERON:0002437;4.60e-07;1!UBERON:0000955;4.72e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.68e-27,89;UBERON:0001017,2.81e-19,81;UBERON:0005162,1.95e-12,2;UBERON:0000122,1.95e-12,2;UBERON:0002780,4.02e-12,41;UBERON:0001890,4.02e-12,41;UBERON:0003080,4.02e-12,41;UBERON:0006240,4.02e-12,41;UBERON:0000013,5.07e-12,5;UBERON:0002410,5.07e-12,5;UBERON:0004121,5.41e-12,171;UBERON:0000924,5.41e-12,171;UBERON:0006601,5.41e-12,171;UBERON:0002619,9.62e-12,22;UBERON:0000955,1.25e-11,68;UBERON:0006238,1.25e-11,68;UBERON:0003056,2.78e-11,61;UBERON:0000010,3.07e-11,8;UBERON:0000956,2.74e-10,25;UBERON:0000203,2.74e-10,25;UBERON:0001950,1.26e-09,20;UBERON:0001893,1.43e-09,34;UBERON:0011216,3.82e-09,223;UBERON:0000073,4.79e-09,53;UBERON:0002616,4.79e-09,53;UBERON:0001049,1.76e-08,56;UBERON:0005068,1.76e-08,56;UBERON:0006241,1.76e-08,56;UBERON:0007135,1.76e-08,56;UBERON:0001871,4.55e-08,6;UBERON:0002791,6.38e-08,32;UBERON:0001869,6.38e-08,32;UBERON:0003075,7.34e-08,82;UBERON:0007284,7.34e-08,82;UBERON:0003528,2.03e-07,34;UBERON:0002020,2.03e-07,34;UBERON:0002346,2.13e-07,86;UBERON:0000941,3.85e-07,1;UBERON:0001785,3.85e-07,1;UBERON:0002464,3.85e-07,1;UBERON:0004904,3.85e-07,1;UBERON:0001021,3.85e-07,1;UBERON:0003902,3.85e-07,1;UBERON:0005425,3.85e-07,1;UBERON:0002336,5.84e-07,1;UBERON:0011215,5.84e-07,1;UBERON:0001018,5.84e-07,1;UBERON:0002473,5.84e-07,1;UBERON:0005340,5.84e-07,1;UBERON:0003544,5.84e-07,1;UBERON:0005970,5.84e-07,1;UBERON:0002316,5.84e-07,1;UBERON:0001020,5.84e-07,1;UBERON:0002437,5.84e-07,1;UBERON:0002902,6.57e-07,1;UBERON:0009899,6.57e-07,1 | |||
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| ||
|short_description=p5@MYCN | |short_description=p5@MYCN | ||
}} | }} |
Latest revision as of 19:18, 17 September 2015
Short description: | p5@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 137bp_to_ENST00000281043, ENST00000426211_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | P04198B4DRZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.18e-18 | 5 |
neuronal stem cell | 1.21e-18 | 8 |
neuron | 3.04e-16 | 6 |
neuroblast | 3.04e-16 | 6 |
electrically signaling cell | 3.04e-16 | 6 |
neurectodermal cell | 6.22e-10 | 59 |
ectodermal cell | 7.83e-08 | 72 |
neural cell | 1.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.30e-10 | 6 |
germ cell and embryonal cancer | 9.28e-07 | 22 |
germ cell cancer | 9.28e-07 | 22 |