FFCP PHASE1:Hg19::chr17:74463679..74463701,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=15 | |EntrezGene=15 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19 | |HGNC=19 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc002jro.2_5end | |association_with_transcript=28bp_to_uc002jro.2_5end | ||
|cluster_id=chr17:74463679..74463701,+ | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_1_at_AANAT_5end | |description=CAGE_peak_1_at_AANAT_5end | ||
|id=chr17:74463679..74463701,+ | |id=chr17:74463679..74463701,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.87e-25;3!UBERON:0006238;1.46e-07;10 | |||
|ontology_enrichment_disease=DOID:171!1.19e-14!10;DOID:169!4.93e-14!6;DOID:3095!3.72e-10!22;DOID:2994!3.72e-10!22;DOID:3093!1.74e-07!11 | |ontology_enrichment_disease=DOID:171!1.19e-14!10;DOID:169!4.93e-14!6;DOID:3095!3.72e-10!22;DOID:2994!3.72e-10!22;DOID:3093!1.74e-07!11 | ||
|ontology_enrichment_disease_v019=DOID:171;4.58e-08;10!DOID:3095;6.85e-08;22!DOID:2994;6.85e-08;22!DOID:3093;5.31e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.50e-08,10;DOID:3095,6.85e-08,22;DOID:2994,6.85e-08,22;DOID:3093,5.31e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!5.34e-20!2;UBERON:0002757!5.34e-20!2;UBERON:0010134!5.34e-20!2;UBERON:0002784!5.34e-20!2;UBERON:0005408!5.34e-20!2;UBERON:0001899!5.34e-20!2;UBERON:0000013!1.02e-16!5;UBERON:0002410!1.02e-16!5;UBERON:0006331!9.42e-13!3;UBERON:0003296!1.81e-10!4;UBERON:0010133!1.81e-10!4;UBERON:0005418!2.08e-10!1;UBERON:0001389!2.08e-10!1;UBERON:0000026!2.08e-10!1;UBERON:0008784!2.08e-10!1;UBERON:0006058!2.08e-10!1;UBERON:0003663!2.08e-10!1;UBERON:0001383!2.08e-10!1;UBERON:0004256!2.08e-10!1;UBERON:0002529!2.08e-10!1;UBERON:0004708!2.08e-10!1;UBERON:0002101!2.08e-10!1;UBERON:0004709!2.08e-10!1;UBERON:0003661!2.08e-10!1;UBERON:0002471!2.08e-10!1;UBERON:0004357!2.08e-10!1;UBERON:0009872!2.08e-10!1;UBERON:0004347!2.08e-10!1;UBERON:0005420!2.08e-10!1;UBERON:0005732!2.08e-10!1;UBERON:0006057!2.08e-10!1;UBERON:0000978!2.08e-10!1;UBERON:0002103!2.08e-10!1;UBERON:0001665!2.08e-10!1;UBERON:0003823!2.08e-10!1;UBERON:0000154!2.08e-10!1;UBERON:0005733!2.08e-10!1;UBERON:0005730!2.08e-10!1;UBERON:0003112!3.61e-10!1;UBERON:0000032!3.61e-10!1;UBERON:0005253!3.61e-10!1;UBERON:0003128!3.61e-10!1;UBERON:0002241!3.61e-10!1;UBERON:0001703!3.61e-10!1;UBERON:0004761!3.61e-10!1;UBERON:0009617!3.61e-10!1;UBERON:0002038!3.96e-10!1;UBERON:0009661!3.96e-10!1;UBERON:0000073!1.12e-09!94;UBERON:0001016!1.12e-09!94;UBERON:0000010!1.54e-09!8;UBERON:0000966!2.04e-08!5;UBERON:0005388!2.04e-08!5;UBERON:0001802!2.04e-08!5;UBERON:0000970!1.30e-07!20;UBERON:0002104!2.96e-07!21;UBERON:0002346!6.72e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0003296;2.26e-19;4!UBERON:0010133;2.26e-19;4!UBERON:0002784;2.26e-19;4!UBERON:0000966;1.88e-15;5!UBERON:0005388;1.88e-15;5!UBERON:0001802;1.88e-15;5!UBERON:0001894;1.68e-11;7!UBERON:0002360;2.49e-10;2!UBERON:0000094;2.49e-10;2!UBERON:0010743;2.49e-10;2!UBERON:0000970;8.30e-09;20!UBERON:0002104;2.05e-08;21!UBERON:0000020;9.89e-08;23!UBERON:0001032;1.97e-07;24!UBERON:0004456;1.97e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.30e-37,2;UBERON:0002757,1.30e-37,2;UBERON:0010134,1.30e-37,2;UBERON:0005408,1.30e-37,2;UBERON:0001899,1.30e-37,2;UBERON:0003296,2.26e-19,4;UBERON:0010133,2.26e-19,4;UBERON:0002784,2.26e-19,4;UBERON:0000966,4.81e-13,6;UBERON:0005388,4.81e-13,6;UBERON:0001802,4.81e-13,6;UBERON:0001894,1.68e-11,7;UBERON:0006222,1.68e-11,7;UBERON:0002360,2.49e-10,2;UBERON:0000094,2.49e-10,2;UBERON:0010743,2.49e-10,2;UBERON:0000970,2.05e-08,21;UBERON:0002104,2.05e-08,21;UBERON:0000020,1.97e-07,24;UBERON:0001032,1.97e-07,24;UBERON:0004456,1.97e-07,24;UBERON:0001016,5.98e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0,0,0,0,5.04586413454137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9539585227364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0363312394521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81367616868034,0,0,0.109209638192014,1.01839517972415,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,605.343074542464,178.230372775977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.00470132931232,9.63883031569632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0.596852325484105,0,0,3.4081560191083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,1.0135880080915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0,0,0,0,5.04586413454137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9539585227364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0363312394521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81367616868034,0,0,0.109209638192014,1.01839517972415,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,605.343074542464,178.230372775977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.00470132931232,9.63883031569632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0.596852325484105,0,0,3.4081560191083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,1.0135880080915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@AANAT | |short_description=p1@AANAT | ||
}} | }} |
Latest revision as of 15:10, 17 September 2015
Short description: | p1@AANAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AANAT_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 28bp_to_uc002jro.2_5end |
EntrezGene: | AANAT |
HGNC: | 19 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.30e-37 | 2 |
regional part of epithalamus | 1.30e-37 | 2 |
secretory circumventricular organ | 1.30e-37 | 2 |
circumventricular organ | 1.30e-37 | 2 |
epithalamus | 1.30e-37 | 2 |
gland of diencephalon | 2.26e-19 | 4 |
neuroendocrine gland | 2.26e-19 | 4 |
regional part of diencephalon | 2.26e-19 | 4 |
retina | 4.81e-13 | 6 |
photoreceptor array | 4.81e-13 | 6 |
posterior segment of eyeball | 4.81e-13 | 6 |
diencephalon | 1.68e-11 | 7 |
future diencephalon | 1.68e-11 | 7 |
meninx | 2.49e-10 | 2 |
membrane organ | 2.49e-10 | 2 |
meningeal cluster | 2.49e-10 | 2 |
eye | 2.05e-08 | 21 |
visual system | 2.05e-08 | 21 |
sense organ | 1.97e-07 | 24 |
sensory system | 1.97e-07 | 24 |
entire sense organ system | 1.97e-07 | 24 |
nervous system | 5.98e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.50e-08 | 10 |
germ cell and embryonal cancer | 6.85e-08 | 22 |
germ cell cancer | 6.85e-08 | 22 |
nervous system cancer | 5.31e-07 | 11 |