FFCP PHASE1:Hg19::chr17:72966776..72966789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:72966776..72966789,+ | |||
|coexpression_cluster_id=C1435 | |||
|description=CAGE_peak_at_chr17:72966776..72966789,+ | |description=CAGE_peak_at_chr17:72966776..72966789,+ | ||
|id=chr17:72966776..72966789,+ | |id=chr17:72966776..72966789,+ | ||
|ontology_enrichment_celltype=CL:0000115!6.06e-21!35;CL:0002139!1.52e-19!24;CL:0002078!3.72e-15!44;CL:0000071!4.83e-14!18;CL:0002546!4.83e-14!18;CL:0000213!3.89e-10!57;CL:0000215!3.89e-10!57;CL:0002543!3.76e-07!6;CL:0005020!3.87e-07!6;CL:0002138!3.87e-07!6;CL:0005022!3.87e-07!6;CL:0002144!8.93e-07!3 | |ontology_enrichment_celltype=CL:0000115!6.06e-21!35;CL:0002139!1.52e-19!24;CL:0002078!3.72e-15!44;CL:0000071!4.83e-14!18;CL:0002546!4.83e-14!18;CL:0000213!3.89e-10!57;CL:0000215!3.89e-10!57;CL:0002543!3.76e-07!6;CL:0005020!3.87e-07!6;CL:0002138!3.87e-07!6;CL:0005022!3.87e-07!6;CL:0002144!8.93e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000115;7.49e-16;36!CL:0002139;1.34e-15;24!CL:0002144;6.58e-14;3!CL:0000071;8.94e-14;18!CL:0002078;4.29e-10;45!CL:0002262;2.63e-09;2!CL:1000398;2.63e-09;2!CL:0000213;7.67e-09;58!CL:0000215;7.67e-09;58!CL:0002544;9.34e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.23e-19,36;CL:0002139,1.23e-15,24;CL:0002078,4.64e-15,45;CL:0000071,6.30e-14,18;CL:0002546,6.30e-14,18;CL:0002144,8.19e-14,3;CL:0000213,5.67e-11,58;CL:0000215,5.67e-11,58;CL:0002262,2.06e-09,2;CL:1000398,2.06e-09,2;CL:0002544,7.45e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;8.94e-14;18!UBERON:0004872;1.81e-09;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.30e-52!115;UBERON:0004111!4.60e-20!241;UBERON:0000477!1.28e-18!286;UBERON:0000025!3.72e-18!194;UBERON:0001049!3.30e-17!57;UBERON:0005068!3.30e-17!57;UBERON:0006241!3.30e-17!57;UBERON:0007135!3.30e-17!57;UBERON:0003080!5.82e-15!42;UBERON:0001986!4.83e-14!18;UBERON:0004638!4.83e-14!18;UBERON:0004852!4.83e-14!18;UBERON:0002616!7.07e-14!59;UBERON:0002780!7.33e-14!41;UBERON:0001890!7.33e-14!41;UBERON:0006240!7.33e-14!41;UBERON:0001893!2.70e-13!34;UBERON:0002791!2.18e-12!33;UBERON:0000483!2.71e-12!309;UBERON:0003075!3.55e-12!86;UBERON:0007284!3.55e-12!86;UBERON:0000119!5.53e-12!312;UBERON:0001869!1.22e-11!32;UBERON:0002619!1.93e-11!22;UBERON:0001950!3.07e-11!20;UBERON:0002346!3.14e-11!90;UBERON:0000487!8.14e-11!22;UBERON:0002020!1.36e-10!34;UBERON:0003528!1.36e-10!34;UBERON:0000955!1.69e-10!69;UBERON:0006238!1.69e-10!69;UBERON:0005743!4.60e-10!86;UBERON:0001017!5.23e-10!82;UBERON:0000956!1.11e-09!25;UBERON:0000203!1.11e-09!25;UBERON:0003056!2.37e-09!61;UBERON:0006914!4.32e-09!25;UBERON:0000468!9.75e-09!659;UBERON:0000467!1.38e-08!625;UBERON:0000480!1.58e-08!626;UBERON:0000073!2.33e-08!94;UBERON:0001016!2.33e-08!94;UBERON:0000055!4.68e-08!69;UBERON:0000064!6.63e-08!219;UBERON:0002465!2.05e-07!10;UBERON:0004872!6.36e-07!84;UBERON:0001915!8.93e-07!3;UBERON:0001982!8.93e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!6.30e-52!115;UBERON:0004111!4.60e-20!241;UBERON:0000477!1.28e-18!286;UBERON:0000025!3.72e-18!194;UBERON:0001049!3.30e-17!57;UBERON:0005068!3.30e-17!57;UBERON:0006241!3.30e-17!57;UBERON:0007135!3.30e-17!57;UBERON:0003080!5.82e-15!42;UBERON:0001986!4.83e-14!18;UBERON:0004638!4.83e-14!18;UBERON:0004852!4.83e-14!18;UBERON:0002616!7.07e-14!59;UBERON:0002780!7.33e-14!41;UBERON:0001890!7.33e-14!41;UBERON:0006240!7.33e-14!41;UBERON:0001893!2.70e-13!34;UBERON:0002791!2.18e-12!33;UBERON:0000483!2.71e-12!309;UBERON:0003075!3.55e-12!86;UBERON:0007284!3.55e-12!86;UBERON:0000119!5.53e-12!312;UBERON:0001869!1.22e-11!32;UBERON:0002619!1.93e-11!22;UBERON:0001950!3.07e-11!20;UBERON:0002346!3.14e-11!90;UBERON:0000487!8.14e-11!22;UBERON:0002020!1.36e-10!34;UBERON:0003528!1.36e-10!34;UBERON:0000955!1.69e-10!69;UBERON:0006238!1.69e-10!69;UBERON:0005743!4.60e-10!86;UBERON:0001017!5.23e-10!82;UBERON:0000956!1.11e-09!25;UBERON:0000203!1.11e-09!25;UBERON:0003056!2.37e-09!61;UBERON:0006914!4.32e-09!25;UBERON:0000468!9.75e-09!659;UBERON:0000467!1.38e-08!625;UBERON:0000480!1.58e-08!626;UBERON:0000073!2.33e-08!94;UBERON:0001016!2.33e-08!94;UBERON:0000055!4.68e-08!69;UBERON:0000064!6.63e-08!219;UBERON:0002465!2.05e-07!10;UBERON:0004872!6.36e-07!84;UBERON:0001915!8.93e-07!3;UBERON:0001982!8.93e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;6.58e-14;3!UBERON:0001915;6.58e-14;3!UBERON:0001982;6.58e-14;3!UBERON:0004638;8.94e-14;18!UBERON:0001986;8.94e-14;18!UBERON:0004852;8.94e-14;18!UBERON:0000487;5.05e-11;22!UBERON:0006914;1.54e-09;25!UBERON:0001281;2.63e-09;2!UBERON:0003497;2.63e-09;2!UBERON:0003909;2.63e-09;2!UBERON:0003835;2.63e-09;2!UBERON:0000922;3.85e-08;49!UBERON:0002108;1.28e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.30e-14,18;UBERON:0001986,6.30e-14,18;UBERON:0004852,6.30e-14,18;UBERON:0010523,8.19e-14,3;UBERON:0001915,8.19e-14,3;UBERON:0001982,8.19e-14,3;UBERON:0000487,3.81e-11,22;UBERON:0006914,1.21e-09,25;UBERON:0001281,2.06e-09,2;UBERON:0003497,2.06e-09,2;UBERON:0003909,2.06e-09,2;UBERON:0003835,2.06e-09,2;UBERON:0004872,3.86e-09,83;UBERON:0000055,7.90e-09,68;UBERON:0003914,2.86e-08,117;UBERON:0007500,1.15e-07,59;UBERON:0001981,1.15e-07,59;UBERON:0004537,1.15e-07,59;UBERON:0006965,1.15e-07,59;UBERON:0002049,2.57e-07,78;UBERON:0007798,2.57e-07,78;UBERON:0002108,2.77e-07,4;UBERON:0001009,9.67e-07,112 | |||
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|short_description=p@chr17:72966776..72966789,+ | |short_description=p@chr17:72966776..72966789,+ | ||
}} | }} |
Latest revision as of 20:58, 25 July 2015
Short description: | p@chr17:72966776..72966789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:72966776..72966789, + |
Coexpression cluster: | C1435_Renal_lung_retina_Mesenchymal_placenta_Hepatic_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.23e-19 | 36 |
endothelial cell of vascular tree | 1.23e-15 | 24 |
meso-epithelial cell | 4.64e-15 | 45 |
blood vessel endothelial cell | 6.30e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.30e-14 | 18 |
capillary endothelial cell | 8.19e-14 | 3 |
lining cell | 5.67e-11 | 58 |
barrier cell | 5.67e-11 | 58 |
endothelial cell of sinusoid | 2.06e-09 | 2 |
endothelial cell of hepatic sinusoid | 2.06e-09 | 2 |
aortic endothelial cell | 7.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.30e-14 | 18 |
endothelium | 6.30e-14 | 18 |
cardiovascular system endothelium | 6.30e-14 | 18 |
microcirculatory vessel | 8.19e-14 | 3 |
endothelium of capillary | 8.19e-14 | 3 |
capillary | 8.19e-14 | 3 |
simple squamous epithelium | 3.81e-11 | 22 |
squamous epithelium | 1.21e-09 | 25 |
hepatic sinusoid | 2.06e-09 | 2 |
abdomen blood vessel | 2.06e-09 | 2 |
sinusoid | 2.06e-09 | 2 |
abdominal segment blood vessel | 2.06e-09 | 2 |
splanchnic layer of lateral plate mesoderm | 3.86e-09 | 83 |
vessel | 7.90e-09 | 68 |
epithelial tube | 2.86e-08 | 117 |
epithelial tube open at both ends | 1.15e-07 | 59 |
blood vessel | 1.15e-07 | 59 |
blood vasculature | 1.15e-07 | 59 |
vascular cord | 1.15e-07 | 59 |
vasculature | 2.57e-07 | 78 |
vascular system | 2.57e-07 | 78 |
small intestine | 2.77e-07 | 4 |
circulatory system | 9.67e-07 | 112 |