FFCP PHASE1:Hg19::chr17:68130693..68130703,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:68130693..68130703,+ | |||
|coexpression_cluster_id=C835 | |||
|description=CAGE_peak_at_chr17:68130693..68130703,+ | |description=CAGE_peak_at_chr17:68130693..68130703,+ | ||
|id=chr17:68130693..68130703,+ | |id=chr17:68130693..68130703,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.67e-23;1!UBERON:0007123;1.13e-18;5!UBERON:0007297;1.85e-12;2!UBERON:0003918;7.08e-10;10!UBERON:0007687;7.08e-10;10 | |||
|ontology_enrichment_disease=DOID:4468!6.36e-10!2 | |ontology_enrichment_disease=DOID:4468!6.36e-10!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!8.98e-35!15;UBERON:0003057!8.98e-35!15;UBERON:0001049!4.55e-32!57;UBERON:0005068!4.55e-32!57;UBERON:0006241!4.55e-32!57;UBERON:0007135!4.55e-32!57;UBERON:0007023!1.60e-30!115;UBERON:0002298!1.66e-27!8;UBERON:0003075!6.13e-24!86;UBERON:0007284!6.13e-24!86;UBERON:0004733!3.25e-23!12;UBERON:0002028!3.25e-23!12;UBERON:0007277!3.25e-23!12;UBERON:0001017!9.04e-23!82;UBERON:0002346!1.22e-22!90;UBERON:0002616!2.76e-22!59;UBERON:0005743!1.73e-21!86;UBERON:0004732!2.49e-21!13;UBERON:0000073!5.39e-19!94;UBERON:0001016!5.39e-19!94;UBERON:0000955!3.80e-18!69;UBERON:0006238!3.80e-18!69;UBERON:0002308!2.63e-17!9;UBERON:0000125!2.63e-17!9;UBERON:0000988!1.09e-14!3;UBERON:0006331!1.25e-14!3;UBERON:0002240!1.72e-14!3;UBERON:0001896!1.98e-14!3;UBERON:0005290!1.98e-14!3;UBERON:0010096!1.98e-14!3;UBERON:0002020!4.78e-13!34;UBERON:0003528!4.78e-13!34;UBERON:0002680!1.50e-12!9;UBERON:0001895!1.50e-12!9;UBERON:0010092!1.50e-12!9;UBERON:0002420!6.67e-12!9;UBERON:0007245!6.67e-12!9;UBERON:0010009!6.67e-12!9;UBERON:0010011!6.67e-12!9;UBERON:0000454!6.67e-12!9;UBERON:0001893!1.47e-10!34;UBERON:0002780!2.00e-10!41;UBERON:0001890!2.00e-10!41;UBERON:0006240!2.00e-10!41;UBERON:0002148!2.12e-10!2;UBERON:0009662!2.12e-10!2;UBERON:0003080!3.91e-10!42;UBERON:0009663!4.06e-10!7;UBERON:0004121!2.14e-09!169;UBERON:0001869!4.46e-09!32;UBERON:0000924!4.60e-09!173;UBERON:0006601!4.60e-09!173;UBERON:0000153!5.22e-09!129;UBERON:0007811!5.22e-09!129;UBERON:0005174!7.08e-09!5;UBERON:0001137!7.08e-09!5;UBERON:0002791!7.89e-09!33;UBERON:0000033!1.80e-08!123;UBERON:0006947!2.26e-07!3;UBERON:0004054!2.26e-07!3;UBERON:0000477!2.39e-07!286;UBERON:0004111!2.64e-07!241;UBERON:0000025!7.90e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.67e-23;1!UBERON:0006868;1.67e-23;1!UBERON:0002046;1.13e-18;5!UBERON:0002298;1.52e-15;6!UBERON:0000341;1.85e-12;2!UBERON:0002148;2.90e-12;2!UBERON:0006331;2.90e-12;2!UBERON:0009662;2.90e-12;2!UBERON:0006947;9.66e-09;3!UBERON:0004054;9.66e-09;3!UBERON:0000988;1.30e-08;3!UBERON:0001896;1.30e-08;3!UBERON:0005290;1.30e-08;3!UBERON:0004733;2.96e-08;12!UBERON:0002028;2.96e-08;12!UBERON:0004732;1.09e-07;13!UBERON:0005904;7.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.10e-23,1;UBERON:0006868,2.10e-23,1;UBERON:0002046,1.13e-18,5;UBERON:0004117,1.13e-18,5;UBERON:0007689,1.13e-18,5;UBERON:0007123,1.13e-18,5;UBERON:0003091,1.13e-18,5;UBERON:0002298,1.41e-15,6;UBERON:0000341,1.65e-12,2;UBERON:0002148,3.24e-12,2;UBERON:0006331,3.24e-12,2;UBERON:0009662,3.24e-12,2;UBERON:0009722,5.00e-09,11;UBERON:0007690,5.00e-09,11;UBERON:0006947,1.04e-08,3;UBERON:0004054,1.04e-08,3;UBERON:0001896,1.12e-08,3;UBERON:0005290,1.12e-08,3;UBERON:0010096,1.12e-08,3;UBERON:0000988,1.40e-08,3;UBERON:0004733,2.85e-08,12;UBERON:0002028,2.85e-08,12;UBERON:0007277,2.85e-08,12;UBERON:0004732,1.05e-07,13;UBERON:0005904,7.70e-07,4;UBERON:0003076,8.58e-07,15;UBERON:0003057,8.58e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60058834087354,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.16354660725395,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0.187967835959707,0,0,0,0,0,1.46067277649303,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.517164979309476,0,2.85677317756488,0,0,0,1.2729431655633,5.2550469129137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60058834087354,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.16354660725395,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0.187967835959707,0,0,0,0,0,1.46067277649303,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.517164979309476,0,2.85677317756488,0,0,0,1.2729431655633,5.2550469129137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:68130693..68130703,+ | |short_description=p@chr17:68130693..68130703,+ | ||
}} | }} |
Latest revision as of 20:24, 25 July 2015
Short description: | p@chr17:68130693..68130703, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:68130693..68130703, + |
Coexpression cluster: | C835_kidney_thyroid_mesothelioma_throat_salivary_seminal_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.10e-23 | 1 |
seminal fluid secreting gland | 2.10e-23 | 1 |
thyroid gland | 1.13e-18 | 5 |
pharyngeal pouch | 1.13e-18 | 5 |
thyroid diverticulum | 1.13e-18 | 5 |
pharyngeal pouch 2 | 1.13e-18 | 5 |
thyroid primordium | 1.13e-18 | 5 |
brainstem | 1.41e-15 | 6 |
throat | 1.65e-12 | 2 |
locus ceruleus | 3.24e-12 | 2 |
brainstem nucleus | 3.24e-12 | 2 |
hindbrain nucleus | 3.24e-12 | 2 |
entire pharyngeal arch endoderm | 5.00e-09 | 11 |
early pharyngeal endoderm | 5.00e-09 | 11 |
male genital duct | 1.04e-08 | 3 |
internal male genitalia | 1.04e-08 | 3 |
medulla oblongata | 1.12e-08 | 3 |
myelencephalon | 1.12e-08 | 3 |
future myelencephalon | 1.12e-08 | 3 |
pons | 1.40e-08 | 3 |
segmental subdivision of hindbrain | 2.85e-08 | 12 |
hindbrain | 2.85e-08 | 12 |
presumptive hindbrain | 2.85e-08 | 12 |
segmental subdivision of nervous system | 1.05e-07 | 13 |
duct of male reproductive system | 7.70e-07 | 4 |
posterior neural tube | 8.58e-07 | 15 |
chordal neural plate | 8.58e-07 | 15 |