FFCP PHASE1:Hg19::chr2:11821544..11821577,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000455754,uc002rbr.2_5end | |association_with_transcript=-8bp_to_ENST00000455754,uc002rbr.2_5end | ||
|cluster_id=chr2:11821544..11821577,+ | |||
|coexpression_cluster_id=C553 | |||
|description=CAGE_peak_1_at_ENST00000455754_5end,CAGE_peak_1_at_uc002rbr.2_5end | |description=CAGE_peak_1_at_ENST00000455754_5end,CAGE_peak_1_at_uc002rbr.2_5end | ||
|id=chr2:11821544..11821577,+ | |id=chr2:11821544..11821577,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.60e-11!24;CL:0002322!5.11e-11!5;CL:0000115!1.23e-10!35;CL:0000071!4.02e-09!18;CL:0002546!4.02e-09!18;CL:0002078!9.46e-09!44;CL:0000213!1.58e-07!57;CL:0000215!1.58e-07!57;CL:0002618!9.29e-07!3 | |ontology_enrichment_celltype=CL:0002139!3.60e-11!24;CL:0002322!5.11e-11!5;CL:0000115!1.23e-10!35;CL:0000071!4.02e-09!18;CL:0002546!4.02e-09!18;CL:0002078!9.46e-09!44;CL:0000213!1.58e-07!57;CL:0000215!1.58e-07!57;CL:0002618!9.29e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.38e-25;5!CL:0000182;4.12e-16;12!CL:0002321;2.20e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.06e-24,5;CL:0000182,3.69e-16,12;CL:0000223,1.46e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.17e-11;11!UBERON:0009497;6.90e-10;13 | |||
|ontology_enrichment_disease=DOID:162!5.56e-13!235;DOID:14566!2.16e-12!239;DOID:1240!7.58e-11!39;DOID:2531!2.57e-10!51;DOID:0060083!2.57e-10!51;DOID:0050686!5.56e-09!137;DOID:8692!3.21e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1799;7.26e-09;1!DOID:10165;7.26e-09;1!DOID:12603;7.26e-09;1!DOID:1798;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.54e-09,1;DOID:10165,4.54e-09,1;DOID:1798,4.54e-09,1;DOID:12603,4.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!4.02e-09!18;UBERON:0004638!4.02e-09!18;UBERON:0004852!4.02e-09!18;UBERON:0006914!2.90e-07!25;UBERON:0000487!4.73e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.07e-10;19!UBERON:0006925;4.07e-10;19!UBERON:0002423;1.22e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.81e-10,19;UBERON:0006925,3.81e-10,19;UBERON:0008836,3.81e-10,19;UBERON:0008835,9.80e-09,22;UBERON:0003894,9.80e-09,22;UBERON:0009854,2.40e-08,23;UBERON:0007499,1.16e-07,25;UBERON:0009497,1.16e-07,25;UBERON:0000015,1.16e-07,25;UBERON:0002423,1.16e-07,25;UBERON:0006235,1.16e-07,25;UBERON:0004161,1.16e-07,25;UBERON:0009856,2.34e-07,26 | |||
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| ||
|short_description=p1@ENST00000455754,p1@uc002rbr.2 | |short_description=p1@ENST00000455754,p1@uc002rbr.2 | ||
}} | }} |
Latest revision as of 23:47, 28 July 2015
Short description: | p1@ENST00000455754, p1@uc002rbr.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000455754_5end, CAGE_peak_1_at_uc002rbr.2_5end |
Coexpression cluster: | C553_acute_non_choriocarcinoma_endometrial_hepatoblastoma_signet_rhabdomyosarcoma |
Association with transcript: | -8bp_to_ENST00000455754, uc002rbr.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.06e-24 | 5 |
hepatocyte | 3.69e-16 | 12 |
endodermal cell | 1.46e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.81e-10 | 19 |
digestive gland | 3.81e-10 | 19 |
liver bud | 3.81e-10 | 19 |
hepatic diverticulum | 9.80e-09 | 22 |
liver primordium | 9.80e-09 | 22 |
digestive tract diverticulum | 2.40e-08 | 23 |
epithelial sac | 1.16e-07 | 25 |
epithelium of foregut-midgut junction | 1.16e-07 | 25 |
anatomical boundary | 1.16e-07 | 25 |
hepatobiliary system | 1.16e-07 | 25 |
foregut-midgut junction | 1.16e-07 | 25 |
septum transversum | 1.16e-07 | 25 |
sac | 2.34e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.54e-09 | 1 |
endocrine pancreas cancer | 4.54e-09 | 1 |
pancreatic endocrine carcinoma | 4.54e-09 | 1 |
acute leukemia | 4.91e-09 | 1 |