FFCP PHASE1:Hg19::chr17:42767234..42767244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124808 | |EntrezGene=124808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26472 | |HGNC=26472 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MW1 | |UniProt=Q96MW1 | ||
|association_with_transcript=-69bp_to_ENST00000315286,ENST00000457422,NM_001099225,NM_144609,uc002ihc.2,uc010czw.1_5end | |association_with_transcript=-69bp_to_ENST00000315286,ENST00000457422,NM_001099225,NM_144609,uc002ihc.2,uc010czw.1_5end | ||
|cluster_id=chr17:42767234..42767244,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_CCDC43_5end | |description=CAGE_peak_4_at_CCDC43_5end | ||
|id=chr17:42767234..42767244,- | |id=chr17:42767234..42767244,- | ||
|ontology_enrichment_celltype=CL:0000557!1.27e-25!71;CL:0002009!5.57e-25!65;CL:0000839!1.15e-24!70;CL:0002194!3.28e-23!63;CL:0000576!3.28e-23!63;CL:0000040!3.28e-23!63;CL:0000559!3.28e-23!63;CL:0000766!1.02e-22!76;CL:0002057!4.91e-20!42;CL:0000860!5.21e-18!45;CL:0000763!3.09e-17!112;CL:0000049!3.09e-17!112;CL:0002031!1.23e-15!124;CL:0000738!6.19e-15!140;CL:0002087!7.56e-13!119;CL:0000988!1.89e-12!182;CL:0000037!6.77e-12!172;CL:0000566!6.77e-12!172;CL:0002032!9.30e-12!165;CL:0000837!9.30e-12!165 | |ontology_enrichment_celltype=CL:0000557!1.27e-25!71;CL:0002009!5.57e-25!65;CL:0000839!1.15e-24!70;CL:0002194!3.28e-23!63;CL:0000576!3.28e-23!63;CL:0000040!3.28e-23!63;CL:0000559!3.28e-23!63;CL:0000766!1.02e-22!76;CL:0002057!4.91e-20!42;CL:0000860!5.21e-18!45;CL:0000763!3.09e-17!112;CL:0000049!3.09e-17!112;CL:0002031!1.23e-15!124;CL:0000738!6.19e-15!140;CL:0002087!7.56e-13!119;CL:0000988!1.89e-12!182;CL:0000037!6.77e-12!172;CL:0000566!6.77e-12!172;CL:0002032!9.30e-12!165;CL:0000837!9.30e-12!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.96e-61;33!CL:0002057;2.96e-61;33!CL:0000473;2.10e-57;39!CL:0000234;2.10e-57;39!CL:0000576;3.23e-30;48!CL:0000766;6.21e-21;69!CL:0000763;1.15e-07;100!CL:0000235;1.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.64e-57,48;CL:0000234,1.64e-57,48;CL:0000860,3.97e-51,42;CL:0002057,3.97e-51,42;CL:0002194,1.47e-45,59;CL:0000576,1.47e-45,59;CL:0000040,1.47e-45,59;CL:0000559,1.47e-45,59;CL:0002009,5.14e-44,61;CL:0000839,1.47e-40,66;CL:0000557,6.28e-40,67;CL:0000766,4.92e-37,72;CL:0000763,5.14e-24,108;CL:0000049,5.14e-24,108;CL:0002087,2.03e-22,115;CL:0002031,2.16e-21,120;CL:0000738,1.33e-18,136;CL:0002032,2.41e-15,161;CL:0000837,2.41e-15,161;CL:0000037,1.33e-14,168;CL:0000988,9.81e-14,177;CL:0000235,1.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-43;42!CL:0000049;7.35e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.02e-22!86;UBERON:0002371!5.09e-21!80;UBERON:0004765!1.91e-18!101;UBERON:0001434!1.91e-18!101;UBERON:0002390!8.81e-16!102;UBERON:0003061!8.81e-16!102;UBERON:0002193!4.57e-13!112;UBERON:0002405!1.52e-11!115;UBERON:0002204!8.01e-11!167;UBERON:0001737!1.40e-08!9 | |ontology_enrichment_uberon=UBERON:0001474!7.02e-22!86;UBERON:0002371!5.09e-21!80;UBERON:0004765!1.91e-18!101;UBERON:0001434!1.91e-18!101;UBERON:0002390!8.81e-16!102;UBERON:0003061!8.81e-16!102;UBERON:0002193!4.57e-13!112;UBERON:0002405!1.52e-11!115;UBERON:0002204!8.01e-11!167;UBERON:0001737!1.40e-08!9 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.46e-35,76;UBERON:0001474,2.73e-32,82;UBERON:0004765,3.05e-29,90;UBERON:0002405,3.12e-28,93;UBERON:0002390,1.10e-26,98;UBERON:0003061,1.10e-26,98;UBERON:0001434,4.14e-26,100;UBERON:0002193,5.14e-24,108;UBERON:0002204,1.10e-16,167;UBERON:0003081,2.82e-13,203;UBERON:0000926,1.00e-08,315;UBERON:0004120,1.00e-08,315;UBERON:0006603,1.00e-08,315 | |||
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| ||
|short_description=p4@CCDC43 | |short_description=p4@CCDC43 | ||
}} | }} |
Latest revision as of 22:27, 24 September 2015
Short description: | p4@CCDC43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC43_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -69bp_to_ENST00000315286, ENST00000457422, NM_001099225, NM_144609, uc002ihc.2, uc010czw.1_5end |
EntrezGene: | CCDC43 |
HGNC: | 26472 |
UniProt: | Q96MW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.64e-57 | 48 |
phagocyte | 1.64e-57 | 48 |
classical monocyte | 3.97e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.97e-51 | 42 |
monopoietic cell | 1.47e-45 | 59 |
monocyte | 1.47e-45 | 59 |
monoblast | 1.47e-45 | 59 |
promonocyte | 1.47e-45 | 59 |
macrophage dendritic cell progenitor | 5.14e-44 | 61 |
myeloid lineage restricted progenitor cell | 1.47e-40 | 66 |
granulocyte monocyte progenitor cell | 6.28e-40 | 67 |
myeloid leukocyte | 4.92e-37 | 72 |
myeloid cell | 5.14e-24 | 108 |
common myeloid progenitor | 5.14e-24 | 108 |
nongranular leukocyte | 2.03e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.16e-21 | 120 |
leukocyte | 1.33e-18 | 136 |
hematopoietic oligopotent progenitor cell | 2.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-15 | 161 |
hematopoietic stem cell | 1.33e-14 | 168 |
hematopoietic cell | 9.81e-14 | 177 |
macrophage | 1.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.46e-35 | 76 |
bone element | 2.73e-32 | 82 |
skeletal element | 3.05e-29 | 90 |
immune system | 3.12e-28 | 93 |
hematopoietic system | 1.10e-26 | 98 |
blood island | 1.10e-26 | 98 |
skeletal system | 4.14e-26 | 100 |
hemolymphoid system | 5.14e-24 | 108 |
musculoskeletal system | 1.10e-16 | 167 |
lateral plate mesoderm | 2.82e-13 | 203 |
mesoderm | 1.00e-08 | 315 |
mesoderm-derived structure | 1.00e-08 | 315 |
presumptive mesoderm | 1.00e-08 | 315 |