FFCP PHASE1:Hg19::chr22:26875366..26875397,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89781 | |EntrezGene=89781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15844 | |HGNC=15844 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481910_5end | |association_with_transcript=0bp_to_ENST00000481910_5end | ||
|cluster_id=chr22:26875366..26875397,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_4_at_HPS4_5end | |description=CAGE_peak_4_at_HPS4_5end | ||
|id=chr22:26875366..26875397,- | |id=chr22:26875366..26875397,- | ||
|ontology_enrichment_celltype=CL:0000037!6.91e-10!172;CL:0000566!6.91e-10!172;CL:0000988!1.11e-08!182;CL:0002032!4.15e-08!165;CL:0000837!4.15e-08!165;CL:0000763!6.14e-07!112;CL:0000049!6.14e-07!112 | |ontology_enrichment_celltype=CL:0000037!6.91e-10!172;CL:0000566!6.91e-10!172;CL:0000988!1.11e-08!182;CL:0002032!4.15e-08!165;CL:0000837!4.15e-08!165;CL:0000763!6.14e-07!112;CL:0000049!6.14e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000817;2.22e-07;1!CL:0000785;2.36e-07;1!CL:0000819;2.36e-07;1!CL:0002032;3.36e-07;1!CL:0000557;3.36e-07;1!CL:0000037;6.20e-07;1!CL:0001024;6.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.51e-11,168;CL:0000988,1.61e-10,177;CL:0002032,1.72e-09,161;CL:0000837,1.72e-09,161;CL:0000817,5.50e-09,3;CL:0000819,2.36e-07,1;CL:0000763,3.88e-07,108;CL:0000049,3.88e-07,108;CL:0001024,6.38e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.07e-18;3 | |||
|ontology_enrichment_disease=DOID:1240!1.08e-31!39;DOID:2531!3.86e-28!51;DOID:0060083!3.86e-28!51;DOID:8692!1.25e-27!31;DOID:0050686!1.33e-10!137;DOID:162!4.22e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.79e-27;39!DOID:8692;6.38e-26;31!DOID:2531;1.90e-23;51!DOID:0060083;1.90e-23;51!DOID:1036;3.10e-11;8!DOID:0060073;2.36e-07;1!DOID:8675;2.36e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.56e-39,51;DOID:0060083,1.56e-39,51;DOID:1240,1.45e-37,39;DOID:8692,1.46e-27,31;DOID:0050686,2.63e-13,137;DOID:1036,4.41e-11,8;DOID:162,1.66e-08,235;DOID:14566,3.16e-08,239;DOID:0060073,2.36e-07,1;DOID:8675,2.36e-07,1;DOID:8552,7.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004733!9.19e-08!12;UBERON:0002028!9.19e-08!12;UBERON:0007277!9.19e-08!12;UBERON:0004732!4.80e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.10e-12;2!UBERON:0005058;2.10e-12;2!UBERON:0009113;2.10e-12;2!UBERON:0002037;3.47e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.62e-09,6;UBERON:0006215,3.62e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.382067028739756,0.410502947249729,0.393553906568396,0,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,3.96513985737078,1.12101712596307,5.26768169550154,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.390178042679635,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,10.153651286537,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0.352193736052904,0.414656231081544,0.288239906833923,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0.522870902049801,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,106.037871537687,10.0309999121264,2.07254154547469,0.798317485731266,1.53204296105893,8.89029047440308,1.29848776109822,0.842391534340376,3.19528550646469,0.156679895773023,0,0.169291777801603,1.76646882614069,5.04499267977619,0.425846237690326,0,0.307240764308458,0.894704431569664,0.333698283423817,0.586164286206121,0.556812347790485,0,1.6227340708559,0.99921590399346,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0,0,1.26675244876796,0,0.276283915531148,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45802306691627,0.347249989866585,0,0,3.05163472634166,8.29344449484185,2.65992857058193,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,1.09886179476517,1.82832850090172,0,0,0,0,2.54298526368606,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,23.9015773872522,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794305140223502,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.26961417541674,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,3.28370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0.303298235083296,1.42732666772484,0,0,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,0.511577485214607,0.970423302570136,0.629063767423586,0,0,0.212574920101683,0,0,0,282.877079319496,0,0,0,0,0,0,0.41023272848151,0.504143392443436,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0.19024743058172,0.546974809018219,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0,0.345701962667338,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,4.77957932786445,2.91751157190532,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 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| ||
|short_description=p4@HPS4 | |short_description=p4@HPS4 | ||
}} | }} |
Latest revision as of 12:40, 19 September 2015
Short description: | p4@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HPS4_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000481910_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.51e-11 | 168 |
hematopoietic cell | 1.61e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.72e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-09 | 161 |
precursor B cell | 5.50e-09 | 3 |
B-1 B cell | 2.36e-07 | 1 |
myeloid cell | 3.88e-07 | 108 |
common myeloid progenitor | 3.88e-07 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.62e-09 | 6 |
rhombic lip | 3.62e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.56e-39 | 51 |
immune system cancer | 1.56e-39 | 51 |
leukemia | 1.45e-37 | 39 |
myeloid leukemia | 1.46e-27 | 31 |
organ system cancer | 2.63e-13 | 137 |
chronic leukemia | 4.41e-11 | 8 |
cancer | 1.66e-08 | 235 |
disease of cellular proliferation | 3.16e-08 | 239 |
lymphatic system cancer | 2.36e-07 | 1 |
lymphosarcoma | 2.36e-07 | 1 |
chronic myeloid leukemia | 7.57e-07 | 1 |