FFCP PHASE1:Hg19::chr21:46424426..46424445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=378825 | |EntrezGene=378825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=19725 | |HGNC=19725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=196bp_to_ENST00000422199,NR_024089,uc002zgo.2_5end | |association_with_transcript=196bp_to_ENST00000422199,NR_024089,uc002zgo.2_5end | ||
|cluster_id=chr21:46424426..46424445,- | |||
|coexpression_cluster_id=C2636 | |||
|description=CAGE_peak_2_at_LINC00162_5end | |description=CAGE_peak_2_at_LINC00162_5end | ||
|id=chr21:46424426..46424445,- | |id=chr21:46424426..46424445,- | ||
|ontology_enrichment_celltype=CL:0002150!1.72e-08!3;CL:0000861!1.72e-08!3 | |ontology_enrichment_celltype=CL:0002150!1.72e-08!3;CL:0000861!1.72e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.46e-08;19!CL:0002541;5.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.46e-08,19;CL:0000066,1.55e-08,253;CL:0002541,6.09e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.77e-12;29 | |||
|ontology_enrichment_disease=DOID:162!9.69e-09!235;DOID:14566!2.44e-08!239;DOID:305!4.44e-08!106;DOID:0050687!1.28e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.20e-14,235;DOID:14566,2.22e-13,239;DOID:305,6.50e-12,106;DOID:0050687,4.07e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.48e-23!9;UBERON:0002298!6.82e-13!8;UBERON:0001557!2.85e-12!19;UBERON:0008947!1.13e-09!38;UBERON:0003258!1.13e-09!38;UBERON:0001049!9.53e-09!57;UBERON:0005068!9.53e-09!57;UBERON:0006241!9.53e-09!57;UBERON:0007135!9.53e-09!57;UBERON:0001896!1.82e-07!3;UBERON:0005290!1.82e-07!3;UBERON:0010096!1.82e-07!3;UBERON:0006331!2.93e-07!3;UBERON:0000988!3.06e-07!3;UBERON:0002616!3.10e-07!59;UBERON:0001041!3.35e-07!98;UBERON:0000955!3.66e-07!69;UBERON:0006238!3.66e-07!69;UBERON:0000065!5.33e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.39e-44;9!UBERON:0001557;6.39e-44;9!UBERON:0000072;5.15e-09;37!UBERON:0000065;1.25e-07;44!UBERON:0003124;5.64e-07;3!UBERON:0000920;5.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.56e-44,9;UBERON:0001557,3.00e-24,19;UBERON:0008947,3.96e-09,38;UBERON:0003258,3.96e-09,38;UBERON:0000072,1.22e-08,47;UBERON:0000065,2.82e-07,54;UBERON:0000920,6.09e-07,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,9.10962360306798,8.42923450390509,7.71235295627142,10.5882213823098,11.3297310928051,8.30447166888838,6.0674088672074,8.82996593064057,7.31019598198142,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05984602216551,7.26584846284905,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31843088410143,0,0,0,0,0,0,0,1.28236630762607,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,4.37004683161367,0,0,0,0,0,0,1.99396161812156,0.330991955875499,1.2557316736289,0,0,0,0,0.489961987071888,0,0,0,3.87025325156341,4.23918039099876,3.69519556739442,0,0,0,3.83717389010903,0,0,0,0.0801588202515337,0,1.39866726707491,0,0,0,0,3.97608113809384,0,0,0,0,0.866851769704557,1.20084057741958,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.904980694530854,0.13223260174269,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0.110929051536852,0.683060432355218,0,0,0,0,2.58792401667989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55262956876259,0,0.53168342911599,0,4.65798587891377,4.18885733385675,0,0,2.14821114084977,0,0,1.20008329398946,0,0,0,0,0,4.4369029634086,2.04035332961045,0,9.7894681802587,0,0,8.55207793356958,5.12398523243055,0,0,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,1.15525666150338,0,0,0,0,5.64774192369856,0,0,0,0.739280431085226,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,1.96308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,2.36069478971826,1.49418284228802,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LINC00162 | |short_description=p2@LINC00162 | ||
}} | }} |
Latest revision as of 20:21, 18 September 2015
Short description: | p2@LINC00162 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00162_5end |
Coexpression cluster: | C2636_Hep2_Mammary_cervical_mesenchymal_mesothelioma_giant_pagetoid |
Association with transcript: | 196bp_to_ENST00000422199, NR_024089, uc002zgo.2_5end |
EntrezGene: | LINC00162 |
HGNC: | 19725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.46e-08 | 19 |
epithelial cell | 1.55e-08 | 253 |
chorionic membrane mesenchymal stem cell | 6.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.56e-44 | 9 |
upper respiratory tract | 3.00e-24 | 19 |
respiratory primordium | 3.96e-09 | 38 |
endoderm of foregut | 3.96e-09 | 38 |
segment of respiratory tract | 1.22e-08 | 47 |
respiratory tract | 2.82e-07 | 54 |
egg chorion | 6.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.20e-14 | 235 |
disease of cellular proliferation | 2.22e-13 | 239 |
carcinoma | 6.50e-12 | 106 |
cell type cancer | 4.07e-11 | 143 |