FFCP PHASE1:Hg19::chr17:38633713..38633724,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38633713..38633724,- | |||
|coexpression_cluster_id=C436 | |||
|description=CAGE_peak_at_chr17:38633713..38633724,- | |description=CAGE_peak_at_chr17:38633713..38633724,- | ||
|id=chr17:38633713..38633724,- | |id=chr17:38633713..38633724,- | ||
|ontology_enrichment_celltype=CL:0002076!4.52e-26!43;CL:0000066!3.83e-21!254;CL:0002368!2.75e-20!13;CL:0000223!4.74e-19!59;CL:0002159!1.11e-13!13;CL:0000244!1.94e-12!4;CL:0000731!1.94e-12!4;CL:0002251!4.31e-11!21;CL:0002202!7.68e-11!9;CL:0002632!7.68e-11!9;CL:0000622!1.05e-09!5;CL:0000362!1.79e-09!8;CL:0000068!1.83e-09!3;CL:0000069!1.83e-09!3;CL:0000307!1.83e-09!3;CL:0000377!1.83e-09!3;CL:0002541!4.23e-09!3;CL:0000240!2.88e-08!6;CL:0000311!2.88e-08!6;CL:0000079!2.88e-08!6;CL:0000237!2.88e-08!6;CL:0000036!2.88e-08!6;CL:0000357!2.88e-08!6;CL:0000114!2.88e-08!6;CL:0000154!4.48e-08!6;CL:0002327!2.27e-07!4;CL:0000317!2.38e-07!2;CL:1000448!2.38e-07!2;CL:0002308!2.38e-07!2;CL:0002140!2.38e-07!2;CL:0000575!4.82e-07!2;CL:0002077!8.70e-07!33 | |ontology_enrichment_celltype=CL:0002076!4.52e-26!43;CL:0000066!3.83e-21!254;CL:0002368!2.75e-20!13;CL:0000223!4.74e-19!59;CL:0002159!1.11e-13!13;CL:0000244!1.94e-12!4;CL:0000731!1.94e-12!4;CL:0002251!4.31e-11!21;CL:0002202!7.68e-11!9;CL:0002632!7.68e-11!9;CL:0000622!1.05e-09!5;CL:0000362!1.79e-09!8;CL:0000068!1.83e-09!3;CL:0000069!1.83e-09!3;CL:0000307!1.83e-09!3;CL:0000377!1.83e-09!3;CL:0002541!4.23e-09!3;CL:0000240!2.88e-08!6;CL:0000311!2.88e-08!6;CL:0000079!2.88e-08!6;CL:0000237!2.88e-08!6;CL:0000036!2.88e-08!6;CL:0000357!2.88e-08!6;CL:0000114!2.88e-08!6;CL:0000154!4.48e-08!6;CL:0002327!2.27e-07!4;CL:0000317!2.38e-07!2;CL:1000448!2.38e-07!2;CL:0002308!2.38e-07!2;CL:0002140!2.38e-07!2;CL:0000575!4.82e-07!2;CL:0002077!8.70e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.50e-26;14!CL:0000362;1.28e-21;9!CL:0000240;1.14e-20;6!CL:0000311;1.14e-20;6!CL:0000079;1.14e-20;6!CL:0000237;1.14e-20;6!CL:0000244;4.66e-18;4!CL:0000731;4.66e-18;4!CL:0000317;4.35e-17;2!CL:1000448;4.35e-17;2!CL:0002308;4.35e-17;2!CL:0002140;4.35e-17;2!CL:0000575;3.76e-16;2!CL:0000312;1.87e-14;5!CL:0002231;1.17e-11;3!CL:0000307;2.57e-11;3!CL:0002076;2.05e-10;42!CL:0002077;4.12e-10;34!CL:0002368;1.20e-09;13!CL:0002252;2.13e-09;1!CL:0002336;6.21e-09;1!CL:0002261;6.21e-09;1!CL:0002170;6.21e-09;1!CL:0002327;9.37e-09;4!CL:0000622;2.35e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.51e-26,14;CL:0000362,1.46e-21,9;CL:0000240,1.37e-20,6;CL:0000311,1.37e-20,6;CL:0000079,1.37e-20,6;CL:0000237,1.37e-20,6;CL:0000036,1.37e-20,6;CL:0000357,1.37e-20,6;CL:0000114,1.37e-20,6;CL:0000244,3.11e-18,4;CL:0000731,3.11e-18,4;CL:0000317,4.54e-17,2;CL:1000448,4.54e-17,2;CL:0002308,4.54e-17,2;CL:0002140,4.54e-17,2;CL:0000575,2.99e-16,2;CL:0000312,2.10e-14,5;CL:0000066,1.08e-13,253;CL:0002076,1.26e-13,42;CL:0002231,1.15e-11,3;CL:0000068,2.93e-11,3;CL:0000069,2.93e-11,3;CL:0000307,2.93e-11,3;CL:0000377,2.93e-11,3;CL:0002077,2.15e-10,34;CL:0002368,9.64e-10,13;CL:0000223,1.71e-09,58;CL:0002252,2.22e-09,1;CL:0002336,6.72e-09,1;CL:0002261,6.72e-09,1;CL:0002170,6.72e-09,1;CL:0002327,8.51e-09,4;CL:0000076,1.53e-08,63;CL:0000622,2.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;1.14e-20;6!CL:0000114;1.14e-20;6!CL:0000377;2.57e-11;3!CL:0000223;2.36e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;6.21e-09;1!DOID:3149;6.21e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.07e-08,1;DOID:3149,1.07e-08,1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.54e-17,2;UBERON:0007771,4.54e-17,2;UBERON:0003297,4.54e-17,2;UBERON:0001821,4.54e-17,2;UBERON:0003487,4.54e-17,2;UBERON:0001820,4.54e-17,2;UBERON:0005089,4.54e-17,2;UBERON:0005088,4.54e-17,2;UBERON:0000365,1.05e-14,5;UBERON:0001003,6.90e-13,15;UBERON:0007376,6.90e-13,15;UBERON:0007383,6.90e-13,15;UBERON:0005910,2.41e-12,6;UBERON:0003102,4.30e-09,99;UBERON:0001911,8.51e-09,4;UBERON:0005333,8.51e-09,4;UBERON:0008425,8.51e-09,4;UBERON:0005311,8.51e-09,4;UBERON:0005085,1.29e-08,31;UBERON:0000964,1.40e-08,4;UBERON:0010409,1.40e-08,4;UBERON:0004348,1.40e-08,4;UBERON:0005427,1.40e-08,4;UBERON:0004119,7.20e-07,160;UBERON:0000925,7.20e-07,160;UBERON:0006595,7.20e-07,160 | |||
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| ||
|short_description=p@chr17:38633713..38633724,- | |short_description=p@chr17:38633713..38633724,- | ||
}} | }} |
Latest revision as of 16:30, 25 July 2015
Short description: | p@chr17:38633713..38633724, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38633713..38633724, - |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 4.54e-17 | 2 |
epidermis gland | 4.54e-17 | 2 |
gland of integumental system | 4.54e-17 | 2 |
sebaceous gland | 4.54e-17 | 2 |
skin sebaceous gland | 4.54e-17 | 2 |
sweat gland | 4.54e-17 | 2 |
sweat gland placode | 4.54e-17 | 2 |
sebaceous gland placode | 4.54e-17 | 2 |
urothelium | 1.05e-14 | 5 |
skin epidermis | 6.90e-13 | 15 |
outer epithelium | 6.90e-13 | 15 |
enveloping layer of ectoderm | 6.90e-13 | 15 |
transitional epithelium | 2.41e-12 | 6 |
surface structure | 4.30e-09 | 99 |
mammary gland | 8.51e-09 | 4 |
mammary bud | 8.51e-09 | 4 |
mammary ridge | 8.51e-09 | 4 |
mammary placode | 8.51e-09 | 4 |
ectodermal placode | 1.29e-08 | 31 |
cornea | 1.40e-08 | 4 |
eye surface | 1.40e-08 | 4 |
optic eminence | 1.40e-08 | 4 |
corneal primordium | 1.40e-08 | 4 |
endoderm-derived structure | 7.20e-07 | 160 |
endoderm | 7.20e-07 | 160 |
presumptive endoderm | 7.20e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.07e-08 | 1 |
keratoacanthoma | 1.07e-08 | 1 |